mRNA_P-littoralis_Contig649.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.340e-58 Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = -1
Query: 4 LLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 324
LLGFTGAIGSTDVTHI+WA CPYSWA+ YTGKEG +IA+QAIVDHTGR+LA TKGF G+MNDKTII YD A+ KIR+DPVY EK YTL D++G+PF+RKGNYSIVD
Sbjct: 6 LLGFTGAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVTKGFAGAMNDKTIIWYDTAVAKIRRDPVYTEKVYTLSDKNGQPFERKGNYSIVD 112
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5KVT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT5_9PHAE) HSP 1 Score: 178 bits (451), Expect = 1.030e-55 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = -1
Query: 4 LLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 324
LLGFTGAIGSTDVTHI+WA CPYSWA+ YTGKEGF +IA+QAIV+ TG +LA TKGF G+MNDKTII YD A+ KIR+DPVY EK YTLFD++G+PF+R+GN SIVD
Sbjct: 6 LLGFTGAIGSTDVTHIRWACCPYSWARQYTGKEGFPSIAYQAIVNDTGLVLAVTKGFAGAMNDKTIIRYDTAVAKIRRDPVYTEKVYTLFDKNGQPFEREGNNSIVD 112
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5KQK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK3_9PHAE) HSP 1 Score: 176 bits (446), Expect = 5.560e-55 Identity = 79/107 (73.83%), Postives = 91/107 (85.05%), Query Frame = -1
Query: 4 LLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 324
LL F GAI STDVTHI+WA CPYSWA+ Y GKEGF +IA+QAIVDHTG +LA TKGF G MNDKTII YD A+ KIR+DPVY +K YTLFD++G+PF+RKGNYSIVD
Sbjct: 7 LLEFAGAIRSTDVTHIRWACCPYSWARQYMGKEGFPSIAYQAIVDHTGHVLAVTKGFAGVMNDKTIIRYDTAVAKIRRDPVYTKKVYTLFDKNGQPFERKGNYSIVD 113
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5L7Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y7_9PHAE) HSP 1 Score: 165 bits (418), Expect = 7.240e-51 Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = -1
Query: 4 LLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 324
LL FTGAIGSTDVTHI+WA CPYSWA+ YTGK+GF +IA++AIVD+TG +L TKGF G+M+DK I+ YD A+ KIR+DP Y EK TLFD++G+PF+RKGNYSIVD
Sbjct: 7 LLEFTGAIGSTDVTHIRWACCPYSWARQYTGKDGFPSIAYEAIVDYTGHVLVVTKGFAGAMSDKPIM-YDTAVAKIRRDPAYTEKVNTLFDKNGQPFERKGNYSIVD 112
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.940e-41 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = -1
Query: 4 LGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 321
LGF+GA GSTDVTHI W CPY+ A+ YTGKEG+ T+A+Q VDHT R+LA T GF GS NDK+II YD A+TKIR+DP+Y EKE+T+++ G P+Q KG Y +VD
Sbjct: 224 LGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVD 329
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5KZ66_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ66_9PHAE) HSP 1 Score: 141 bits (356), Expect = 4.370e-40 Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = -1
Query: 4 CPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 264
CPYS A+ YTGKEGF +IA+QAIVDHTGR+LA TKGF G+MNDKTII YD A+ IR+DPVY EK TLFDE+G PF+RKGNYSIVD
Sbjct: 21 CPYSRARQYTGKEGFPSIAYQAIVDHTGRVLAVTKGFPGAMNDKTIIRYDTAVAMIRRDPVYTEKVNTLFDENGRPFERKGNYSIVD 107
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 145 bits (366), Expect = 8.450e-40 Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = -1
Query: 4 LGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 321
+GF GA+GSTDVTHI W CPY+ A+ YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VD
Sbjct: 149 IGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVD 254
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 145 bits (366), Expect = 3.650e-39 Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = -1
Query: 4 LGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 321
+GF GA+GSTDVTHI W CPY+ A+ YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VD
Sbjct: 240 IGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVD 345
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.440e-35 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = -1
Query: 4 LGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 321
LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TI +Q VDH GR +A T+GF GS NDKT + +DAA+ KIR D Y EK + ++++ G KG Y +VD
Sbjct: 26 LGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVD 131
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Match: A0A6H5JG32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG32_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.770e-34 Identity = 60/106 (56.60%), Postives = 71/106 (66.98%), Query Frame = -1
Query: 4 LGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIRKDPVYKEKEYTLFDEHGEPFQRKGNYSIVD 321
LG TGAIGSTDVTHI W CP++ + YTGKEGF TIA+Q VDH GR +A T GF G+ NDKTII YDA + I+ D Y ++ Y L G +RKG Y IVD
Sbjct: 7 LGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHVIKADFQYTKRTYKLRRADGTFRERKGCYLIVD 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig649.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig649.9.1 >prot_P-littoralis_Contig649.9.1 ID=prot_P-littoralis_Contig649.9.1|Name=mRNA_P-littoralis_Contig649.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp MVDDAVVALSLEWLTMLVEESVLLLLVDRVFADFSDGRVVRDDGLVVHRAback to top mRNA from alignment at P-littoralis_Contig649:23014..23337- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig649.9.1 ID=mRNA_P-littoralis_Contig649.9.1|Name=mRNA_P-littoralis_Contig649.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=324bp|location=Sequence derived from alignment at P-littoralis_Contig649:23014..23337- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig649:23014..23337- >mRNA_P-littoralis_Contig649.9.1 ID=mRNA_P-littoralis_Contig649.9.1|Name=mRNA_P-littoralis_Contig649.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=324bp|location=Sequence derived from alignment at P-littoralis_Contig649:23014..23337- (Pylaiella littoralis U1_48)back to top |