prot_P-littoralis_Contig648.10.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig648.10.6
Unique Nameprot_P-littoralis_Contig648.10.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length615
Homology
BLAST of mRNA_P-littoralis_Contig648.10.6 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 668 bits (1723), Expect = 2.920e-233
Identity = 369/607 (60.79%), Postives = 422/607 (69.52%), Query Frame = 0
Query:   30 GRQRSWVQLPRRMDPGSPGAVPSSKAPPADRIIRILSYNVLGARQGLSKKHGHVGLDIRNWSARRDRLREEIWSYHKSKPGGLHVVCLEEVTFRTLGDTWFAFMARLGLDRHVYQPKSDRPQKRHRSRCLGVAIFYSSKYFEKTADLRVVFSEEARGLREDSDRKRKR---------PDGVSEFLEVLQPGAGKRKTAPSDQFLRRVYGGDTGTGGPEGREDPATASRLEQDLEDKHDAAAMVRLRLKRNGSDSDG----------DEKELAITVVCAHLFYDPTRPDLKTAQCQMLFQAIQRFHEKIGVPVPYSVGKPGSG----GPANLILCADFNSKPLMDPTFLPGPLKAATEARFPAPATLTTQDPSVSTPRRSNIIWSEDIYPSSKDTASGVYSLLDYGCVPPTHPEHPDAFIPEFVKAKEEEEALEKERVAKGGRRRWTPQRPLRPGGPPVIRAVHRSSGEWTSGFGTSLEDVYRDRGNVSPRFTTKTSSFSGVIDHLFVSTGEKDSGLEISGVLAFPPGANLAEERGATPLQIELGPGDDGSQREGNSSSSAEQSDQQYDGEFEHEKKQTDGHTEGEFPPIPDEVWGSDHLALGVEITV 613
            GRQRSWV +PRR +    GA    +A  A   IRILSYNVLGARQGL+ KH HVG+DIRNW  RRDRLREEIWSY KS PGG+ V+CL+EVTFRTLG  W  FMA+LGLDRHVYQPKSDRPQ+RHRSRCLGVAIFYSS +FEK A++RVVFSEE  GLRED  R+ +R         P+ V    +     AGK    P DQFLRRVYGGDTG G     +DPAT SRLEQDL ++HDAAA+VRLRLK +    +G           E   + TVVCAHLFYDP RPDLKTAQCQMLFQAI R HEK GV      GK GS     GPANL+LCADFNSKPL+DP FLPGPLKAA +AR    A + +QDPS  TP  S    S+D+YPSS+ TASGVY LL+YGCVPPTHPEHPD FIPE++K KE+EE   +E    GG + WTP+R  R  G PV+ A HR SGEW SGFG +LED YRDRG VSP FTTKTSSFSG+IDH+FVSTGEKDSGL ISGVLAFPPGA+L E R  T    +L                 EQS  +   + + E   TD    GEF PIP+++WGSDHLALGVE+ +
Sbjct:   42 GRQRSWVDIPRRRE----GAERKGEA--ASDRIRILSYNVLGARQGLADKHDHVGVDIRNWPTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFSEETLGLREDRGREGERSHSSRASELPEAVPAAPKATTTRAGKGAAPPCDQFLRRVYGGDTGRGAKR-EQDPATVSRLEQDLANRHDAAALVRLRLKESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASALGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPG-SQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTRGAPVVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGRETTSSGEDL-----------------EQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVL 623          
BLAST of mRNA_P-littoralis_Contig648.10.6 vs. uniprot
Match: A0A0D2MGA1_9CHLO (CCR4-NOT transcription complex subunit6 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MGA1_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 8.650e-12
Identity = 101/386 (26.17%), Postives = 152/386 (39.38%), Query Frame = 0
Query:  237 PEGREDPATASRLEQDLEDKHDAAAMVRLRLKRNGSDSDGDEKELAITVVCAHLFYDPTRPDLKTAQCQMLFQAIQRFHE-KIGVPVPYSVGKPGSGGPANLILCADFNSKPLMDPTFLPGPLKAATEARFPAPATLTTQDPSVSTPRRSNIIWSEDIY---PSSKDTASGVYSLLDYGCVPPTHPEHPDAFIPEFVK--AKEEEEALEKERVAK--GGRRRW-TPQRPLRPGGPPVIRAVHRSSGEWTSGFGTSLEDVYRDRGNVSPRFTTKTSSFSGVIDHLFVSTGEKDSGLEISGVLAFPPGANLAEERGATPLQIELGPGDDGSQREGNSSSSAEQSDQQYDGEFEHEKKQTDGHTEGEFPPIPDEVWGSDHLALGVEITV 613
            P    D A A  L + L  + + AA   L+ + +G           +     HLF+DP  PD+K  Q   L + I  F E ++G         PG+     +++  DFNS        LPG                               +W+ D +   P  +   S VY LL  G V PTHP+HP       V    +++++AL  E++A   GG RR  +PQR  +  G P    + R S   TSG    L  ++       P  TT+T++F G +D+LF+S G      ++   L  P            P Q + G G  G +  G   + A                     ++  FPP P+ VW SDH+A+G E+ +
Sbjct:  122 PRAVRDDAAAQPLMRVLMRREEGAAAALLQHRASGR---------RVLAASTHLFWDPQFPDVKLVQAAALCRGIADFLETRLG---------PGAAAAVPVLIGGDFNS--------LPG-------------------------------VWASDPFNTVPPGQCLVSAVYELLVTGRVGPTHPDHPSQRSCARVARAGQQQQQALAAEQLAAVGGGLRRGPSPQRGHQRAGSPGRCPLDRLSFN-TSGL--QLNSMHVQALGREPPLTTRTATFDGTLDYLFLSAGH----WQVLSTLDMP-----------FPSQQQQGQGQHGQRPGGGGLTGAH-------------AVPPGSVSQAAFPPAPNAVWASDHVAVGAELEL 419          
BLAST of mRNA_P-littoralis_Contig648.10.6 vs. uniprot
Match: A0A150GH85_GONPE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GH85_GONPE)

HSP 1 Score: 65.5 bits (158), Expect = 1.390e-7
Identity = 96/370 (25.95%), Postives = 143/370 (38.65%), Query Frame = 0
Query:  253 LEDKHDAAAMVRLRLKRNGSDSDGDEKELAITVVCAHLFYDPTRPDLKTAQCQMLFQAIQRFHEKIGVPVPYSVGKPGSGGPANLILCADFNSKPLMDPTFLPGPLKAATEARFPAPATLTTQDPSVSTPRRSNIIWSEDIYPSSKDTASGVYSLLDYGCVPPTHPEHPDAFI----PEFVKAKEEEEALEKERVAKGGRRRWTPQRPLRPGGPPVIRAVHRSSGEWTSGFGTSLEDVYRDRGNVSPRFTTKTSSFSGVIDHLFVSTGEKDSGLEISGVLAFPPGANLAEERGATPLQIELGPGDDGSQREGNSSSSAEQSDQQYDGEFEHEKKQTDGH-----TEGEFPPIPDEVWGSDHLALGVEITV 613
            L++  + A +V LR +  G        +L +  V  HLF++P  PD+K  Q  +L  A+  F ++         G  G      ++LC DFNS                   R P      + DP V                 +   ASGVY+LL  G +PP HP+HP + +    P         +A    + A GG  R+    P  P G   +R    S+      FG              P  TT+T+SF+G +D++++S+G   S L +   LA P       E G       +GP        G +            G+F     + DG       +  F PIPDE + SDHLA+G E+ +
Sbjct:  155 LKELGEGAVLVLLRHRPTG--------QLLLGAV-THLFWNPAFPDVKVLQAALLCGAMAAFAQEAS-------GAAGQAASVPVVLCGDFNS---------------LASKRLP-----DSFDPQV----------------PADGLASGVYTLLSRGSLPPDHPDHPHSRVWGPGPGXXXXXXXXDAS---KAASGGAERF----PALPMGCSGLRLTSLSA----EAFGRE------------PPLTTRTASFAGCLDYVWLSSGP-GSKLAVVSALAMP----YDNEDGLP----SMGPSAAARPAAGGA------------GDFGXXXGRRDGSWRDPLADIAFRPIPDEEYPSDHLAVGGELLL 428          
BLAST of mRNA_P-littoralis_Contig648.10.6 vs. uniprot
Match: D8UDG9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDG9_VOLCA)

HSP 1 Score: 58.9 bits (141), Expect = 1.910e-5
Identity = 61/213 (28.64%), Postives = 86/213 (40.38%), Query Frame = 0
Query:  401 ASGVYSLLDYGCVPPTHPEHPDAFIPEFVKAKEEEEALEKERVAKGGRRRWTPQRPLRPGGPPVIRAVHRSSGEWTSGFGTSLEDVYRDRGNVSPRFTTKTSSFSGVIDHLFVSTGEKDSGLEISGVLAFPPGANLAEERGATPLQIELGPGDDGSQREGNSSSSAEQSDQQYDGEFEHEKKQTDGHTEGEFPPIPDEVWGSDHLALGVEITV 613
            ASGVYSLL +G +PP HP+HP   +                         W  + P  PG      AV  +S +      TS+   +  R    P  TT+T++++G ID +++S G+      +S  LA P       + G  PL  + G GD G +                      E    D   +  F  IPDE + SDHLA+G EI V
Sbjct:  349 ASGVYSLLSHGSLPPKHPDHPATRV-------------------------WEGEPPAPPGSQ-RFPAVPLTSAQLQL---TSMNAEFFGR---EPPLTTRTATWAGCIDFVWLSRGD----FAVSSALAMP-----YSDDGLPPLGPDGGGGDGGGR----------------------EASWRDPFADIAFTAIPDEFFPSDHLAVGGEIMV 498          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig648.10.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIG3_ECTSI2.920e-23360.79Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A0D2MGA1_9CHLO8.650e-1226.17CCR4-NOT transcription complex subunit6 n=1 Tax=Mo... [more]
A0A150GH85_GONPE1.390e-725.95Endo/exonuclease/phosphatase domain-containing pro... [more]
D8UDG9_VOLCA1.910e-528.64Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 27..614
e-value: 4.4E-52
score: 179.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 56..613
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 65..523
e-value: 6.1E-10
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 572..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..470
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 30..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig648contigP-littoralis_Contig648:105478..113721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig648.10.6mRNA_P-littoralis_Contig648.10.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig648 104804..113747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig648.10.6 ID=prot_P-littoralis_Contig648.10.6|Name=mRNA_P-littoralis_Contig648.10.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=615bp
MMLLRVLLFVPTIVIVALKPTVVSGPASNGRQRSWVQLPRRMDPGSPGAV
PSSKAPPADRIIRILSYNVLGARQGLSKKHGHVGLDIRNWSARRDRLREE
IWSYHKSKPGGLHVVCLEEVTFRTLGDTWFAFMARLGLDRHVYQPKSDRP
QKRHRSRCLGVAIFYSSKYFEKTADLRVVFSEEARGLREDSDRKRKRPDG
VSEFLEVLQPGAGKRKTAPSDQFLRRVYGGDTGTGGPEGREDPATASRLE
QDLEDKHDAAAMVRLRLKRNGSDSDGDEKELAITVVCAHLFYDPTRPDLK
TAQCQMLFQAIQRFHEKIGVPVPYSVGKPGSGGPANLILCADFNSKPLMD
PTFLPGPLKAATEARFPAPATLTTQDPSVSTPRRSNIIWSEDIYPSSKDT
ASGVYSLLDYGCVPPTHPEHPDAFIPEFVKAKEEEEALEKERVAKGGRRR
WTPQRPLRPGGPPVIRAVHRSSGEWTSGFGTSLEDVYRDRGNVSPRFTTK
TSSFSGVIDHLFVSTGEKDSGLEISGVLAFPPGANLAEERGATPLQIELG
PGDDGSQREGNSSSSAEQSDQQYDGEFEHEKKQTDGHTEGEFPPIPDEVW
GSDHLALGVEITVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase