mRNA_P-littoralis_Contig1167.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 630 bits (1625), Expect = 7.490e-190 Identity = 494/1240 (39.84%), Postives = 633/1240 (51.05%), Query Frame = 1
Query: 1120 SPSSRCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVLVVE---GAESDEDTAVDAL--AFAAADNSGKYSVMNGSDVGGGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGEISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKG-HTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACAIIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSGELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRT-PAATAPYHRRGEP-AAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMPPAGRAAPAATVDSNISGAGGDAD-----------------STPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHASTIGWTPGA*WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*--YRRRAGRGGAARDGARR------GLPCRNGDRRPPELSF----PLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTW-----------------RKPTSGHR*TRKYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFR-----AVQG*PLCFPQDYRWCGS-HDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSIRKSL 4659
S RC+RC +GH C P V +E+AVLVVE G S + TA+D A D SG+ + G GG + Y+AD+ AT +M ++DG Y E R + +A G IVGYGD+TV L + +G + L VAH P L Y+L+SL S+ G T T +K + L+ GGE ++FP G LY Q G+R + + ACA IAPG AKAP+TP DIN HC GH+HEVLL+ TA+QQG GEL EC GCS AKGL KPI T TRAVKKLQRVFVDLSG+ +S+GGK YTLIV+DD R+ RVYFL+ KSDA AFE YLAE RA+G PS VM VRSDNGGEFFEG FG +CRK IKQEF PA SP+YNGVAER L LI DAA+AARIQA ++PGAP++PSLWAEA++W+C+ALN T+TT+NP KSPYE+W+G P P P + T K + G T + + P P P + P E A E GGGR + + G GF + PA S APS S + XXXXXXXXXXXXXXXX XXXXXXXXXXXXX+S SE LP+ G R R A R R + R+ R P S ++ ++ +ST +T +W + A L A V RA AAR A L + D L+ PIGK+P++VE+ P VA V S+YREGWEQAM+ EFEGH+ TGTF VD P+GR+PV SKWCF +KT+KEG+I KARLVARGF+QI NVDY HSSSP + L + + + W + P + K + + G +K+ +GR+ + G C+ +D FR V + + D GS DC + + ++ + GEC W+DGC IERD+E GT+++SQ AY++S++ +FDV+S S IPA+PG DLGPKREDE GG+WPVREA+GS++W+ST +RPD++ AVRAVAR+AH+P R W +I+K L
Sbjct: 274 SMRGRCFRCGKKGHQVANC---PESKPVRXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGR---GGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR-----THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPVDGG-----PGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAE---LTSRRTRENPRRNPRYE----SPPSPTSAEALLASVASLPDSSTEEFT-------------RWMLSAVLHV-----AEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLA--VANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYG-LKQ--SGRQWGYHAADTLVENGFEQCK-ADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEEL----------------LASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1450
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 630 bits (1624), Expect = 4.540e-189 Identity = 493/1240 (39.76%), Postives = 630/1240 (50.81%), Query Frame = 1
Query: 1120 SPSSRCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVLVVE---GAESDEDTAVDAL--AFAAADNSGKYSVMNGSDVGGGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGEISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKG-HTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACAIIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSGELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRT-PAATAPYHRRGEP-AAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMPPAGRAAPAATVDSNISGAGGDAD-----------------STPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHASTIGWTPGA*WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*--YRRRAGRGGAARDGARR------GLPCRNGDRRPPELSF----PLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTW-----------------RKPTSGHR*TRKYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFR-----AVQG*PLCFPQDYRWCGS-HDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSIRKSL 4659
S RC+RC +GH C P V +E+AVLVVE G S + TA+D A D SG+ + G GG + Y+AD+ AT +M ++DG Y E R + +A G IVGYGD+TV L + +G + L VAH P L Y+L+SL S+ G T T +K + L+ GGE ++FP G LY Q G+R + + ACA IAPG AKAP+TP DIN HC GH+HEVLL+ TA+QQG GEL EC GCS AKGL KPI T TRAVKKLQRVFVDLSG+ +S+GGK YTLIV+DD R+ RVYFL+ KSDA AFE YLAE RA+G PS VM VRSDNGGEFFEG FG +CRK IKQEF PA SP+YNGVAER L LI DAA+AARIQA ++PGAP++PSLWAEA++W+C+ALN T+TT+NP KSPYE+W+G P P P + T K + G T + + P P P + P E A E GGGR + + G GF + PA S APS S + XXXXXXXXXXXXXXXX XXXXXXXXXXXXX+S SE LP+ G R R A R R + R+ R P S S +++ P + +W + A L A V RA AAR A L + D L+ PIGK+P++VE+ P VA V S+YREGWEQAM+ EFEGH+ TGTF VD P+GR+PV SKWCF +KT+KEG+I KARLVARGF+QI NVDY HSSSP + L + + + W + P + K + + G +K+ +GR+ + G C+ +D FR V + + D GS DC + + ++ + GEC W+DGC IERD+E GT+++SQ AY++S++ +FDV+S S IPA+PG DLGPKREDE GG+WPVREA+GS++W+ST +RPD++ AVRAVAR+AH+P R W +I+K L
Sbjct: 287 SMRGRCFRCGKKGHQVANC---PESKPVRXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGR---GGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR-----THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPVDGG-----PGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAE---LTSRRTRENPRRNPRYESPPSPPTSAP------SPTSAEALLASVASLPDS----STEEFTRWMLSAVLHV-----AEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLA--VANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYG-LKQ--SGRQWGYHAADTLVENGFEQCK-ADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEEL----------------LASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1470
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 629 bits (1623), Expect = 3.670e-188 Identity = 493/1240 (39.76%), Postives = 630/1240 (50.81%), Query Frame = 1
Query: 1120 SPSSRCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVLVVE---GAESDEDTAVDAL--AFAAADNSGKYSVMNGSDVGGGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGEISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKG-HTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACAIIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSGELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRT-PAATAPYHRRGEP-AAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMPPAGRAAPAATVDSNISGAGGDAD-----------------STPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHASTIGWTPGA*WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*--YRRRAGRGGAARDGARR------GLPCRNGDRRPPELSF----PLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTW-----------------RKPTSGHR*TRKYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFR-----AVQG*PLCFPQDYRWCGS-HDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSIRKSL 4659
S RC+RC +GH C P V +E+AVLVVE G S + TA+D A D SG+ + G GG + Y+AD+ AT +M ++DG Y E R + +A G IVGYGD+TV L + +G + L VAH P L Y+L+SL S+ G T T +K + L+ GGE ++FP G LY Q G+R + + ACA IAPG AKAP+TP DIN HC GH+HEVLL+ TA+QQG GEL EC GCS AKGL KPI T TRAVKKLQRVFVDLSG+ +S+GGK YTLIV+DD R+ RVYFL+ KSDA AFE YLAE RA+G PS VM VRSDNGGEFFEG FG +CRK IKQEF PA SP+YNGVAER L LI DAA+AARIQA ++PGAP++PSLWAEA++W+C+ALN T+TT+NP KSPYE+W+G P P P + T K + G T + + P P P + P E A E GGGR + + G GF + PA S APS S + XXXXXXXXXXXXXXXX XXXXXXXXXXXXX+S SE LP+ G R R A R R + R+ R P S S +++ P + +W + A L A V RA AAR A L + D L+ PIGK+P++VE+ P VA V S+YREGWEQAM+ EFEGH+ TGTF VD P+GR+PV SKWCF +KT+KEG+I KARLVARGF+QI NVDY HSSSP + L + + + W + P + K + + G +K+ +GR+ + G C+ +D FR V + + D GS DC + + ++ + GEC W+DGC IERD+E GT+++SQ AY++S++ +FDV+S S IPA+PG DLGPKREDE GG+WPVREA+GS++W+ST +RPD++ AVRAVAR+AH+P R W +I+K L
Sbjct: 430 SMRGRCFRCGKKGHQVANC---PESKPVRXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGR---GGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR-----THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNDKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPVDGG-----PGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVAPSTTSTGTADVGGGEDDRXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAE---LTSRRTRENPRRNPRYESPPSPPTSAP------SPTSAEALLASVASLPDS----STEEFTRWMLSAVLHV-----AEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLA--VANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYG-LKQ--SGRQWGYHAADTLVENGFEQCK-ADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEEL----------------LASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKIL 1613
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 610 bits (1574), Expect = 2.700e-181 Identity = 487/1219 (39.95%), Postives = 637/1219 (52.26%), Query Frame = 1
Query: 1132 RCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVLVVEGAESDEDTAVDALAFAAADNSGKYS-VMNGSDVGGGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGEISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKGHTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACA-IIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSG-ELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLAS---------ITPATACA*SPLAALS*PPAMSLGDTCPLPPRTPAATAPYHRRGEPAAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEA---GFLMPPAGRAAPAATVDSNISGAGGDADSTPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSE-----RYLPSRAGARGPRHDRNTNC---ARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHA-STIGWTPGA*WRAGRTTRLKW-QPNTTRSEKGEGSA------NTLSASAV*YRRRAGRGGAARDGARRGLPCRNGDRRPPELSFPLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTWRKPTSGHR*TR----KYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFRA------------VQG*PLCFPQDYRWCGSHDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSI 4647
RC+ C +GH C TK SD+ C C G+GHK + C +E AVL SD D+ + A A G+ ++ VG G+ V Y+ADS ATC+M ADG NY+E +R + GG + I+GYGD+TV L+++ V V + AH P + +LISL S+ +GHTY G G+ L G+ ++FP +GKL +GY+ E VDTACA II PG AKA TP D+N H + GH HE LL+ TA+QQG+ +G L C GCS+AKG K + R T TRAVKKL RVF+DL GRM SIGG+ YTLI+R D R+TRV+FL+RKS+A A E ++A+ R++GTP V VRSDN F+G F + CRK GIKQE P +PKYNGVAER L +I+DAA+A+RIQA EMFP AP P+LWAEA++ ACH LN TATTANPGDKSPYE+++G P P P ++ K + G A +T A + PA+S P+PP+ P A GE GEG GGG +DL+SES LD+TE G PA APA V N G GD S PP+P G G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + S Y A R P + A + L Y G Q GR ST+ G G+ ++ Q + + E A S V R + C N PELS P PIG+KPN+VE+LP +V+ S YR+ W++A++ E +GH KTGTF ++ +P+GRK V +KW FDYKTD++G IT KARLVARGF+Q+ DY HSSS + L T G P ++ + + + S + GK+ + G + EW + + S + RA V + + D + GS + G + +++ L P +++ GECTWYDGC IERD+ELGT LSQ+AY+ LM +F + + + PA P DLGPKR+DE G D PVR+A+G L+W +T TRPDI A+ AV R AH+PT R WK++
Sbjct: 468 RCFTCGLKGHKSFQCETKESDYNPQCEHCLGWGHKKEKCPTEAAVLAE--VVSDVDSVENQAYMAEATQPGECGRTVDLGLVGVEEQGQGVMRYVADSGATCSMFRSADGFKNYQECNRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEP---EVDTACAAIIVPGEAKAA-TPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDNE---FQGQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDAPTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGKPPPAGSVYPFLKPAVYKARRERKSHPKGRKGWYLGPAHNHPRDCVRMLTEAGTVVTTRNFTWRHVPAVS-----PVPPQLPLADI-----GE--GGEGEGSEDTSSRGGGGEEDLASESDLDMTEIRGPGRATLPARENAPA--VPGN--GIQGDEGSAPPSPHLGGGDFGGGDGIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDVDGEDSGGSDDGEYKYDPADTRYPPGTQGKKLLWGASKEGPLRY-----GLQRGRTXXXXXXXXXXXXXXXXXXXXXXXXXLLSTVLEVEG-----GKELVAEYLQRSLVEERQMEEMALXXXXXXXXXXSDVPVERPFN------------IDCSN-----PELSIPSPIGQKPNDVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEE----EGEELLTSLRKTL------PVKDL-----GECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKAL 1619
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 506 bits (1304), Expect = 5.090e-149 Identity = 416/1061 (39.21%), Postives = 538/1061 (50.71%), Query Frame = 1
Query: 1591 VAHAPLLHYHLISLPSMALKGHTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACA-IIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSG-ELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRTPAATAPYHRRGEPAAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEA---GFLMPPAGRAAPAATVDSNISGAGGDADSTPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT----------SQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNC---ARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHA-STIGWTPGA*WRAGRTTRLKW-QPNTTRSEKGEGSA------NTLSASAV*YRRRAGRGGAARDGARRGLPCRNGDRRPPELSFPLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTWRKPTSGHR*TR----KYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFRA------------VQG*PLCFPQDYRWCGSHDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSI 4647
+ H P + +LISL S+ +GHTY G G+ L G+ ++FP +GKL +GY+ E VDTACA II PG AKA TP D+N H + GH HE LL+ TA+QQG+ +G L C GCS+AKG K + R T TRAVKKL RVF+DL GRM SIGG+ YTLI+R D R+TRV+FL+RKS+A A E ++A+ R++GTP V VRSDN F+G F + CRK GIKQE P +PKYNGVAER L +I+DAA+A+RIQA EMFP AP P+LWAEA++ ACH LN TATTANPGDKSPYE+++G P PPA S+ P PA R GGG +DL+SES LD+TE G PA APA V N G GD S PP+P G G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S + +Y P A R P + A + L Y G Q GR ST+ G G+ ++ Q + + E A S V R + C N PELS P PIG+KPN+VE+LP +V+ S YR+ W++A++ E +GH KTGTF ++ +P+GRK V +KW FDYKTD++G IT KARLVARGF+Q+ DY HSSS + L T G P ++ + + + S + GK+ + G + EW + + S + RA V + + D + GS + G + +++ L P +++ GECTWYDGC IERD+ELGT LSQ+AY+ LM +F + + + PA P +LGPKR+DE G D PVR+A+G L+W +T TRPDI A+ AV R AH+PT R WK++
Sbjct: 138 IXHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEP---EVDTACAAIIVPGEAKAA-TPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDNE---FQGQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDAPTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGKP------------------------------------------------------PPAGSV-----YPFLKPAVEDTSSR------------------GGGGEEDLASESDLDMTEIRGPGRATLPARENAPA--VPGN--GIQGDEGSAPPSPHLGGGDFGGGDGIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDVDGEDSGGSDDGEYKYDP--ADTRYPPGTQGKKLLWGASKEGPLRY-----GLQRGRTXXXXXXXXXXXXXXXXXXXXXXXXXLLSTVLEVEG-----GKELVAEYLQRSLVEERQMEEMALXXXXXXXXXXSDVPVERPFN------------IDCSN-----PELSIPSPIGQKPNDVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEE----EGEELLTSLRKTL------PVKDL-----GECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKAL 1066
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JIN8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN8_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 1.690e-123 Identity = 236/475 (49.68%), Postives = 309/475 (65.05%), Query Frame = 1
Query: 1132 RCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVL--VVEGAESDEDTAVDALAFAAADNSGKYSVMNGSDVG-GGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGE--ISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKGHTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACA-IIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYS-GELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLP 2535
RC RC H+GH + C T DF+ C +C G+GH + C +E+AVL VVE E+D D+ D A A SG+ + +VG G + + A Y+AD+AATC+M AD NYRE S + GG + + ++GYG +T+ L+T++G V V + + AH P Y+L+SL S+A +GHTY+G K G+TL G ++FP GKL Q GY+ + T + TACA +I PG AKA P D+N H GH +E LL+ TAEQQG+ + G L C GCS++KG KP+ +ST TRAVKKL RV++DL G+M T SIGG YTLI+RDDC R+T V+F SDA FE LA+ R G P V R+D GGEF +G F E+CR+ GIKQEF P +PKYNGVAER L LI DAA+A+RIQAT++FP AP+ P LWAEA+S ACH LN TAT +N GDKS YE+++ SP P
Sbjct: 104 RCCRCGHRGHQAIGCITNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVEH-ENDVDSVEDQAICAVAVPSGECGTVG--EVGLVGVVEQSQAVYVADTAATCSMFRCADNFMNYRERSGWMKRIGGDKAPVPLLGYGGVTLVLQTEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPT---LHTACAALIVPGDAKAA-NPTDLNGYHPAHGHANETLLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDCSRWTCVFFFNH-SDAAVGFEKSLADYRTKGVPCKVYIARTDGGGEF-QGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLNCTATKSNEGDKSAYEMFHDSPPP 569
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5KUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV5_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 5.280e-123 Identity = 390/1100 (35.45%), Postives = 500/1100 (45.45%), Query Frame = 1
Query: 1438 MTPDADGLTNYRESSRPLGLAGGGEISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKG-HTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACAIIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSGELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRT-PAATAPYHRRGEP-AAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMP-PAG---RAAPAATVDSNISGAGGDADSTPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRARM----TRRKPLSVSAG*CWRSAWRKRRH---ASTIGWTPGA*WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*YRRRAGRGGAARDGARRGLPCRNGDRRPPELSFPLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTWRKPTSGHR*TRKYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFRAVQG*PLCFPQDYRWCGSHDCGSV--------RGRP-VGRRIKERL**AVGIPQQEISHQKPGECTWYDG---CGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAHSPTARLWKSIRKSL 4659
M ++DG Y E R + +A G IVGYGD+TV L + +G + L VAH P L Y+L+SL S+ G T T K + L+ GGE++ FP G LY + G R + A IAPG AKAP+TP DIN HC GH+HEVLL+ TA+QQG GEL EC GCS AKGL PI T TRA K LQRVFVDLSG+ +S+GGK YTLIV+DD R+ RVYFL+ KSDA AFE YLAE RADG PS VM VRSDNGGEFF G FG +CRK IKQEF+PA SP+YNGVA+R L LI DAA+AARIQA+ P P + A++WA +AL+ T+TT+NP KSP ELW+G P P P + T K + G T + S + P P P + P E A GE GGGR + + G +P PAG R APAA + GDA APS+ G S XXXXXXXXXX E LP+ G R R A R L R + R+ R T + L SA S+ K ++ + G RA R + + + + E L A + + D L ELS PIG +P+ VES P A V + + V KWCF +KT+KEG+I K KARLVARGF+QI NVDY HSSSP L + +++ W + YT + E LR G H + RA+ G Q R G H ++ + P V R++ +++ + + + D G + D E+ L+ ++ DV+S S IPASPG DLGPK++DE GG+WPVREA GS++W+ST +RP + AVRAVAR+AH+P R W +I+K L
Sbjct: 1 MFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLKKHDLELERVGGESVHFPRCGNLYVRNGSRTHN-----EHASPTIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTMLVGELLECLGCSTAKGLSTPIPNKTSTRAAK-LQRVFVDLSGKTRAQSLGGKWYTLIVKDDFTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDNGGEFFYGEFGRVCRKYCIKQEFSPAHSPEYNGVADRALDLIKDAALAARIQASTFPPEPRTTPPFGSNAIAWASNALSCTSTTSNPVKKSPCELWHGHPPPPRATNPFLQPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRQAITTRNSTWQSVPAAPTALPQSLPPIAEEEEEFATGEDEVGEGASSQGGGRAEGEPVDGGPSFNLETTAVPGPAGLPARVAPAAPPAAPQEPGAGDASDG--APSSREGARVAPSTTSAGMADVGGGEDDRRSSSRRDSGGSGSDXXXXXXXXXXXXXXXXXXXXXXXXXXETDLPALRGPEARRLARFDKPAELTRRL---TRENPRRNPRYESPPLPTSTEALLASAASLPVSSTEKFTSWMLSAVLHVAEGLEARAARELLFE-RAEEAHAARQEAEDFLLGAVDLMLN--------SPDAFETALASH-------ELSE-SPIGNRPSGVESPPMTGAGV-------------------------------AKRRARGVSPKWCFSWKTNKEGKIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASTKLMLA--VENEKGMSLIYWDAKQA-------YT-----------HATLDEEVFLRLP-----AGCGDQSHKIVKAERAIYG----LKQSGRQWGYHAADTLVENKFEQCKADPFVFRKMIDKVVVMIIV-------------IYVDDILVAGSDEDCEMLLASLN-------MVKHLDVQSTSRIPASPGVDLGPKQDDEKGGEWPVREATGSMMWVSTFSRPGASFAVRAVARHAHAPAKRHWDAIQKIL 992
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 1.670e-119 Identity = 373/984 (37.91%), Postives = 465/984 (47.26%), Query Frame = 1
Query: 1771 GSSVDTACAIIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYSGELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRT-PAATAPYHRRGEP-AAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMPPAGRAAPAATVDSNISGAGG--------------------DADSTPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRARMTRRKPLSVSAG*CWRSAWRKRRHASTIGWTPGA*WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*--YRRRAGRGGAARDGARR------GLPCRNGDRRPPELSF----PLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSSPARRQRPLNLC*R*QTSGDFPFTILTWRKPTSGHR*TRKYT*SSPTVVGKIKEDSTGREGNLRPQTEWPKVGSLVCRHSDSRRFRAVQG*PLCFPQDYRWCGS-HDCGSVRGRPVGRRIKERL**AVGIPQQEISHQKPGECTWYDGCGIERDMELGTIKLSQEAYVESLMTKFDVESISDIPASPGDDLGPKREDELGGDWPVREAVGSLLWLSTMTRPDITNAVRAVARYAH 4617
G + A A IAPG KA P DIN HC H+HEVLL+ TA+QQG GEL EC GCS AKGL KPI T TRAVKKLQRVFVDLSG+ +S+GGK YTLIV+DD R+ RVYFL+ KSDA AFE YLAE RA+G PS VM VRSDNGGEFFEG FG +CRK IKQEF PA SP+YNGVAER L LI DAA+AARIQA ++PGAP++PSLWAEA++W+C+ALN T+TT+NP KSPYE+W+G P P P + T K + G T + + P P P + P E A E GGGR + + G GF + PA A P S + G XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX S + R SE LP+ G R R A R R + R+ R P S S +++ P + +W + A L A V RA AAR A L + D L+ PIGK+P++VE+ P VA V KPV SKWCF +KT+KEG+I K ARL ARGF++I +VDY HSSS + L ++ G+ ++ T+V E + R E V V +C D GS DC + + ++ + EC W+DGC IERD+E GT+K+SQ AY++S++ +FDV+S IPASPG DLGP+R+DE GG+WPVREA+GS++W+ST +RPD++ AVRAVAR+AH
Sbjct: 651 GRXTEHAYAAIAPGNVKASNAPVDINDFHCAHRHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPVDGG-----PGFNLGTTAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASIAPSTTSTGTADVGGGEDXXXXXXXXXXXXXXXXXXDSSSRXXXXXXXXXXXXXSSVDDDGSDSRRGS---DSETDLPALCGPEARRLARFDKPAE---LTSRRTRENPRRNPRYESPPSPPTSAP------SPTSAEALLASVASLPDS----STEEFTRWMLSAVLHV-----AEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLNSPDAFETALASHELSESPIGKRPSDVEAPPMTVAGV-----------------------------------AKPVSSKWCFSWKTNKEGKIGKFNARLDARGFSKIPDVDYFHSSSRCPSSASIELMLAVANEKGMNLNHWDVKQAQWGYH-------AADTLVENGFEQCKVDPCDFRRMVEEVVVMITV----------------ICV-DDILVAGSDEDCEEL----------------LASLNKKFPTKDTEECEWFDGCAIERDIEAGTLKISQTAYIDSMVERFDVKSTLRIPASPGVDLGPRRDDEKGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAH 1533
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JM30_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM30_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 2.750e-117 Identity = 350/943 (37.12%), Postives = 474/943 (50.27%), Query Frame = 1
Query: 1132 RCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVL--VVEGAESDEDTAVDALAFAAADNSGKYSVMNGSDVGGGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGEISIV--GYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKGHTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACA-IIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYS-GELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLA---LINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLPTEGCGPSSSRLSVESSETTNHSRKLKTATM*GLASITPATACA*SPLAALS*PPAMSLGDTCPLPPRTPAATAPYHRRGEPAAGEGXXXXXXXXXGGGRVDDLSSESGLDVTEAGFLMPPAGRAAPAATVDSNISGAGGDADSTPPAPSAFSGRAGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQYSRAERPIVRHSSERYLPSRAGARGPRHDRNTNCARRPRTLCYRVRSSGRQTGRAR-MTRRKPLSVSAG*CWRSAWRKRRHASTIGWTPGA*----WRAGRTTRLKWQPNTTRSEKGEGSANTLSASAV*YRRRAGRGGAARDGARRGLPCRNGDRRPPELSFPLPIGKKPNEVESLPRNVAEVELSMYREGWEQAMQIEFEGHMKTGTFRMVDSIPQGRKPVGSKWCFDYKTDKEGRITKLKARLVARGFTQIRNVDYTHSSS 3918
R +RC H+GH + CTT DF+ C C G+GH + C +E+AVL VVE + D D+ D A A G+ + G + G + + A Y+A++AATC+M AD + NYRE S + GGG ++ GYGD+++ L+T++G V + + AH Y+L+SL S+A +GHTY+G K G+TL G ++FP GKL Q GY+ + T + TACA +I G AKA P D+N H G E LL+ TAEQQG+ + G L C GCS++ G KP+ +ST TRAVKKL RV++DL G+M T SIGG YTLI+RDD R+TRV+FL+ KSDA E +LA+ R G P V R+D GGEF +G F E+CR+ GIKQEF P +PKYNGVAER L LI DAA+A+RIQAT++FP AP+ P LWAEA+S ACH LN TAT +N GDKS YE+++ SP P P ++S K + G A P ++ T + +P AT HR P G R + + G S +SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Y R ++ L + A RH G ++GR R TR + + +TI T G + + +W TR + E + ++A A G+ + LP P+LS PIG+KP++VE++P +V S Y+ WE AM+ E +GH KTGTF V +P+GRK + SKW F + T++ G I A +VARG ++I + + HSSS
Sbjct: 350 RYFRCGHRGHQMIGCTTNEKDFVPWCALCEGWGHTKEKCATEEAVLAQVVEH-DCDVDSVEDQAFCAVAVPPGECGTV-GDEGLVGVVEQGQAVYVAETAATCSMFRCADNVVNYRERSGWVKGIGGGTAPVLFRGYGDVSLVLQTEDGGVHGPVLNAAHVAEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPT---LHTACAALIVSGDAKAA-NPTDLNEYHLAHGQARETLLRITAEQQGVQLTDGPLLPCLGCSMSTGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGLEKFLADYRTKGVPCEVYIARTDGGGEF-QGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLNCTATKSNEGDKSAYEMFHDSPPPVGSTYPFLKPAMLKSRRKAKSQPKGEKGWYVGPAHNHPRYCVV-----------MLTEAGTVVITRNSPGATCQLHR---PLPRSCYLLQMTRRTGRARAERMHHAKGKXXXXXXXXXXXXXXXXXXXXXXXXXSS--------------------SSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLEELKYDPADDRYPRGL------EGKKLLWGTSNAGPLRH--------------------GLESGRTRKQTREMQGAGXXXXXXXXXXXEEALLATILETGGTGIVEDYICNWLVKEQWDQEQTR--RMEEMYRREMQEVLGPEQQAFGAEVAASGSSQPLPD-------PQLSMTSPIGQKPSDVEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFAKVKELPEGRKAIASKWVFSWNTNETGLIVDFNAHMVARGLSRIPGIGFHHSSS 1216
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 7.960e-117 Identity = 233/475 (49.05%), Postives = 308/475 (64.84%), Query Frame = 1
Query: 1132 RCWRCNHQGHHRVTCTTKPSDFLVMCTKCSGFGHKTDDCISEQAVL--VVEGAESDEDTAVDALAFAAADNSGKYSVMNGSDVG-GGALGKQVASYIADSAATCNMTPDADGLTNYRESSRPLGLAGGGE--ISIVGYGDLTVNLRTDNGWVRVELHDVAHAPLLHYHLISLPSMALKGHTYTGDKDGITLKLDGGETLFFPLVGKLYRQFGYRPEATGSSVDTACA-IIAPGRAKAPTTPADINVLHCTFGHTHEVLLKKTAEQQGLAYS-GELHECRGCSLAKGLRKPIARSTHTRAVKKLQRVFVDLSGRMATESIGGKRYTLIVRDDCMRFTRVYFLRRKSDATSAFESYLAEVRADGTPSAVMAVRSDNGGEFFEGSFGELCRKRGIKQEFAPADSPKYNGVAERGLALINDAAVAARIQATEMFPGAPDFPSLWAEAVSWACHALNLTATTANPGDKSPYELWYGSPLP 2535
RC+RC H+GH + CTT DF+ C +C G+GH + C +E+AVL VVE ESD D+ D A A G+ + +VG G + + A Y+AD+AATC+M AD NYRE S + GG + + ++GYGD+T+ L+ ++G V V + + AH P Y+L+SL S+A +GHTY+G K G+TL G ++FP GKL Q GY+ + T + T CA +I PG AKA P D+N H GH HE LL+ TAEQQG+ + G L C GCS++K KP+ + T TRAV+ RV++DL G M T SIGG YTLI+RDD R+TRV+FL+ KSDA FE +LA+ R +G P R+D GGEF +G F E+CR+ GIKQEF P +PKYNGVAER L LI DAA+A+RIQAT++FP AP+ P LWAEA+S ACH LN TAT +N GDKS YE+++ SP P
Sbjct: 405 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVEH-ESDVDSVEDQAFCAVAVPPGECGTVG--EVGLVGVVEQGQAVYVADTAATCSMFRCADNFVNYRERSGWVKGIGGDKAPVPLLGYGDVTLVLQAEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPT---LHTTCAALIVPGDAKAA-NPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKAQVKPVQKCTSTRAVQNFFRVYLDLEGTMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTNGVPCEDFIARADGGGEF-QGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLNCTATKSNEGDKSAYEMFHNSPSP 871 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1167.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1167.9.1 >prot_P-littoralis_Contig1167.9.1 ID=prot_P-littoralis_Contig1167.9.1|Name=mRNA_P-littoralis_Contig1167.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=475bp MCTKCSGFGHKTDDCISEQAVLVVEGAESDEDTAVDALAFAAADNSGKYSback to top mRNA from alignment at P-littoralis_Contig1167:44263..60798+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1167.9.1 ID=mRNA_P-littoralis_Contig1167.9.1|Name=mRNA_P-littoralis_Contig1167.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16536bp|location=Sequence derived from alignment at P-littoralis_Contig1167:44263..60798+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1167:44263..60798+ >mRNA_P-littoralis_Contig1167.9.1 ID=mRNA_P-littoralis_Contig1167.9.1|Name=mRNA_P-littoralis_Contig1167.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1425bp|location=Sequence derived from alignment at P-littoralis_Contig1167:44263..60798+ (Pylaiella littoralis U1_48)back to top |