prot_P-littoralis_Contig647.15.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig647.15.5
Unique Nameprot_P-littoralis_Contig647.15.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1112
Homology
BLAST of mRNA_P-littoralis_Contig647.15.5 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 743 bits (1918), Expect = 4.120e-252
Identity = 487/855 (56.96%), Postives = 548/855 (64.09%), Query Frame = 0
Query:  206 HAEFMRELASQNGLQLGCSHGQDERARHRREVERRIEIQDNCVRRPSVGQSKSLLKAKILGSIGGGPFELLRAFRKMHSGRGTVIDFKGFREAVKKLGLGLTEPEIMDFFRSFDADGSGGIDFAEFCEWVGAINDTGDXXXXXXXXXXXXXXX---------------FRPSSGGSDKSVSKRKMRDAQAKVKAASEKVPTRTMAENEHLLRQKILGSIGGGPFEFLRAFRKMHRGRGTVVDLDDFREAVTTFSLGLGEPEVVAFFNGFDADGSGGIDFEEFCAWVGGGDAGGGEE-CIISDSKPTNSG-GFSPFAPGGGXXXXXXXXXXXDEEEMTPAQKAQETVSRAFREQAAKMSSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGEFRGVELADFKEAVHRYGMGVTDAQVERLFRRYDKDGSGDIDFHEFLKLIMYAEELAPEDHPARKRGDG------GAAEEGGDEGGDVRPLSPGWASRAAAAAAD-----DRDEQDGGRDTGDGKGDGSXXXXXXXXXXXXXXXXXXXPGAPPHANNGSGLRREGQQQHLCES-VLALSPATKGAKAEQKMNMIACVRNRWRHMLTAFRRRDPLRTGTVTFDEFQQALAENKAMQALGMGDISALASKHAAPRGRVDYPRFMRHLLIRNEGAGSARPAITGGVRKYSRQHNIISSSTPNDLRPTTSAGTRAAELRSTKSTGALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYPLRDRAISLCRELQPHIINAWKPLWRDLKAADQL-TAAKAKCSGSYNSXXXXXXXXXXXXXXXXXARSGTTTSYAGVSTGEVETHVFSAVLAR 1030
            H EFMRELAS NGLQL CS G+DERARHRREV+RRI+IQ++CVRRPSVGQSK LLKAKILGSIGGGPFELLRAFRKM  G GTVIDFKGFRE VKKL LGLTEPEI+DFFRSFDADGSGGIDF+EFCEW+ A +D+ D   XXXXXXXXXXXX               FRPSSGGSDKSVSKRKMRDAQAKVKAASE+VP RTMAENE LLRQKILGSIGGGPF+ LRAFRKMHRGRGTVVDL+DFREAV TFSLGLGEPEV AFF GFDADGSGGIDFEEFCAWVGG DA G  +  ++ DSK T S  GF P   G G           D+   TPA +AQE V+RAFREQA                                            GVEL DFKEAVHRYGMGVTDAQVE+LFRRYDKDGSGDIDFHEFLKLIMYAE+LAP++      G G       A +      G VRPL+PGW S   AA AD     + D+++            +        XXXXX       GA PH  +    +R+G+ + +CE  VL  SP T GAKAE+KM   ACVR+RWRHML+AFRR DPLRTG VT DEF+Q L  NKAMQ+L  GD++ALA+KHA  RGRVDYPRFMRHLL+ N  AG  RPA  GGV + + +      S+P     T++  TR   L+ + STGAL A                                XXXX       LRDRAI++CRELQPHI++ WKPLW+D KAAD+  TA KA  S  +        X           R G   SY GV  G+VE HVF AVLAR
Sbjct:   56 HQEFMRELASHNGLQLRCSQGEDERARHRREVDRRIQIQEDCVRRPSVGQSKVLLKAKILGSIGGGPFELLRAFRKMTCGGGTVIDFKGFREGVKKLSLGLTEPEILDFFRSFDADGSGGIDFSEFCEWMEATDDSADEPGXXXXXXXXXXXXXXXXXXXTSKGREGGFRPSSGGSDKSVSKRKMRDAQAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFCAWVGGTDAAGAADGFLLPDSKTTKSSPGFIPGVAGEGGWD--------DDTTKTPAMRAQERVTRAFREQAG-------------------------------------------GVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIMYAEDLAPQEPLETPVGLGTPPCPDAACDR---PRGGVRPLTPGWISDENAATADGTSNDNTDKRERNXXXXXXXXXXNFGNLPGKEXXXXXRSAGEGCGAGPHVAS----KRQGRSRPVCEQPVLGSSPVTNGAKAEEKMK--ACVRSRWRHMLSAFRRLDPLRTGAVTSDEFRQVLTANKAMQSLQKGDLAALAAKHAIARGRVDYPRFMRHLLLGNGPAGD-RPA--GGVGRDNDEDGGGRGSSPRHRSATSAKATRPG-LKVSMSTGALPAPGAISSPSPRRDRLHQLRPLDRQAARHGSGGGXXXXGNE----LRDRAIAICRELQPHIVSVWKPLWKDFKAADESSTAKKATGSRRHAQGACGGGXAGGASSRYRLPRDG---SYRGVCMGDVEAHVFRAVLAR 839          
BLAST of mRNA_P-littoralis_Contig647.15.5 vs. uniprot
Match: A0A6H5KCV0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.650e-15
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0
Query:  289 VIDFKGFREAVKKLGLGLTEPEIMDFFRSFDADGSGGIDFAE 330
            VIDFKGFRE VKKL LGLTEPEI+DFFRSFDADGSGGIDF+E
Sbjct:    2 VIDFKGFREGVKKLNLGLTEPEILDFFRSFDADGSGGIDFSE 43          
BLAST of mRNA_P-littoralis_Contig647.15.5 vs. uniprot
Match: A0A2D4BW89_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW89_PYTIN)

HSP 1 Score: 77.4 bits (189), Expect = 1.190e-10
Identity = 93/352 (26.42%), Postives = 142/352 (40.34%), Query Frame = 0
Query:  286 RGTVIDFKGFREAVKKLGLGLTEPEIMDFFRSFDADGSGGIDFAEFCEWVGAINDTGDXXXXXXXXXXXXXXXFRPSSGGSDKSVSKRKMRDAQ-AKVKAASEKVPTR-TMAENEHLLRQKILGSIGGGPFEFLRAFRKMHRGRGTVVDLDDFREAVTTFSLGLGEPEVVAFFNGFDADGSGGIDFEEFCAWVGGGDAGGGEECIISDSKPTNSGGFSPFAPGGGXXXXXXXXXXXDEEEMTPAQKAQETVSRAFRE-QAAKMSSETLHKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGEFRGVELADFKEAVHRYGMGVTDAQVERLFRRYDKDGSGDIDFHEFLKLIM 634
            + T I    F  A+ KLGL LT  ++ + F  FD D SG +D  EF + V  ++D                  F      S K   K K+ +++ A    A + V +  T+AE E +LR+KI          F +AFR   +  G  +  D+F  A+ T  L L   +    F  FD +GSG  D +EF   V   D  G +    +D                             E ++    +A     R   E +    S + + K +R+K+  +      T  + Y    +S ++       + +F++ +   G  +T AQ E LFRRYD DGS DID  EF   I+
Sbjct:  417 KSTGITPTEFNVAMVKLGLKLTSRQLDELFELFDFDKSGDLDXNEFVQGV-MLDD------------------FSTKHWYSIKD--KHKVEESRRALYSMAVQSVXSSWTIAEIEQMLREKIEQRTSKSSDCFRQAFRIFKKVNG--IKPDEFHAALETIGLALDRSQSDILFQRFDKNGSGDXDLDEFIHGVLPPDYTGQQWVAAADEMHR-------------------------EADLRKKYEAVHNPERYMNEVEMESWSLDEIEKRIRDKIQQSTSKSSDTFRQAYRIFKKSNHI------TIDEFRDRLLALGFRLTRAQCEGLFRRYDTDGSNDIDLQEFCMRIL 714          
BLAST of mRNA_P-littoralis_Contig647.15.5 vs. uniprot
Match: A0A078AAI2_STYLE (Ef hand family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AAI2_STYLE)

HSP 1 Score: 59.7 bits (143), Expect = 3.580e-5
Identity = 47/201 (23.38%), Postives = 92/201 (45.77%), Query Frame = 0
Query:  275 LLRAFRKMHSGRGTVIDFKGFREAVKKLGLGLTEPEIMDFFRSFDADGSGGIDFAEFCEWV---GAINDTGDXXXXXXXXXXXXXXXFRPSSGGSDKSVSKRKMRDAQAKVKAASEKVPTRTMAENEHLLRQKILGSIGGGPFEFLRAFRKMHRGRGTVVDLDDFREAVTTFSLGLGEPEVVAFFNGFDADGSGGIDFEEF 472
            L+++F+         +DF  F+ A+ K+G+ + E ++  FFR++D++G+G +D+ EF + V      + +G+                  +S G  ++ + R +RD +  ++A  +K+  R              G IG       R F+ M       +D  +F++AV  F + + +  +   F  FD +  G ID++EF
Sbjct:   42 LIKSFKFFDFSNSGEVDFPTFQRAIAKMGVVVDEEDLEVFFRAYDSNGNGKLDYKEFSDIVFNRAQASGSGN------------------ASQGRQQASTYRGLRDPKPYIEAIRDKIKQRGAR-----------GIIG-----LQRVFKIMDDNNSKSLDKQEFKKAVRDFKIDIPDEYIDIIFAAFDLNRDGTIDYDEF 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig647.15.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWU7_ECTSI4.120e-25256.96EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
A0A6H5KCV0_9PHAE1.650e-1590.48EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2D4BW89_PYTIN1.190e-1026.42Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A078AAI2_STYLE3.580e-523.38Ef hand family protein n=1 Tax=Stylonychia lemnae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..388
NoneNo IPR availableGENE3D1.10.238.10coord: 222..350
e-value: 2.3E-12
score: 48.9
coord: 364..480
e-value: 6.4E-11
score: 44.2
NoneNo IPR availableGENE3D1.10.238.10coord: 586..844
e-value: 2.3E-14
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..937
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 990..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..695
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..887
NoneNo IPR availablePANTHERPTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDcoord: 259..474
coord: 739..847
coord: 531..669
IPR002048EF-hand domainSMARTSM00054efh_1coord: 451..479
e-value: 0.021
score: 24.0
coord: 310..338
e-value: 2.3E-5
score: 33.8
coord: 774..802
e-value: 65.0
score: 3.1
coord: 608..636
e-value: 0.0016
score: 27.7
coord: 415..443
e-value: 17.0
score: 7.9
coord: 274..302
e-value: 36.0
score: 5.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 289..333
e-value: 1.2E-7
score: 31.4
coord: 591..632
e-value: 2.3E-4
score: 20.9
coord: 430..474
e-value: 2.3E-7
score: 30.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 306..341
score: 13.286007
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 604..639
score: 13.425486
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 447..482
score: 11.193852
IPR002048EF-hand domainCDDcd00051EFhcoord: 415..476
e-value: 9.54395E-11
score: 56.4021
IPR002048EF-hand domainCDDcd00051EFhcoord: 274..335
e-value: 5.15633E-14
score: 65.6469
IPR002048EF-hand domainCDDcd00051EFhcoord: 588..634
e-value: 1.75016E-10
score: 55.6317
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 617..629
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 589..837
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 273..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig647contigP-littoralis_Contig647:118161..157004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig647.15.5mRNA_P-littoralis_Contig647.15.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig647 118104..158127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig647.15.5 ID=prot_P-littoralis_Contig647.15.5|Name=mRNA_P-littoralis_Contig647.15.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1112bp
MSPVVDAEQPSPASVSAIAGGGDGDGGTGGGKFPKRQLSGDLKLRLARLP
SLGGGGSGGGGGGNGGGEGGGGRRKPSSTREHGRRTIGMCTHRSNTPSIC
SSRRGYGQDGTASAVPRVLSMTSGRDGFSLVPAATASVAINGGVDSSRLN
WVNPRTQRLPSTARSSLVSGRSGGGGGGGGDRVGAGVEAGGGGGASGGGG
EDDDDHAEFMRELASQNGLQLGCSHGQDERARHRREVERRIEIQDNCVRR
PSVGQSKSLLKAKILGSIGGGPFELLRAFRKMHSGRGTVIDFKGFREAVK
KLGLGLTEPEIMDFFRSFDADGSGGIDFAEFCEWVGAINDTGDDDGGGGG
ENIRGGGGFRPSSGGSDKSVSKRKMRDAQAKVKAASEKVPTRTMAENEHL
LRQKILGSIGGGPFEFLRAFRKMHRGRGTVVDLDDFREAVTTFSLGLGEP
EVVAFFNGFDADGSGGIDFEEFCAWVGGGDAGGGEECIISDSKPTNSGGF
SPFAPGGGGPGRGGGAGTGDEEEMTPAQKAQETVSRAFREQAAKMSSETL
HKVLREKLISTVKPGGGTLLRTYHNLHRSGNVGEFRGVELADFKEAVHRY
GMGVTDAQVERLFRRYDKDGSGDIDFHEFLKLIMYAEELAPEDHPARKRG
DGGAAEEGGDEGGDVRPLSPGWASRAAAAAADDRDEQDGGRDTGDGKGDG
SGGSGGSGGGRGATAGLVGAPGAPPHANNGSGLRREGQQQHLCESVLALS
PATKGAKAEQKMNMIACVRNRWRHMLTAFRRRDPLRTGTVTFDEFQQALA
ENKAMQALGMGDISALASKHAAPRGRVDYPRFMRHLLIRNEGAGSARPAI
TGGVRKYSRQHNIISSSTPNDLRPTTSAGTRAAELRSTKSTGALAAAAPS
PPSRRRSQHHLHPIDNKTTSRGGGGGDGGGDGGGGGNYPLRDRAISLCRE
LQPHIINAWKPLWRDLKAADQLTAAKAKCSGSYNSSSSSSSSSSAHGGGG
GNARSGTTTSYAGVSTGEVETHVFSAVLARHGLELSNRDLMALEHLPAMT
HKGWALPAAQGRRALLSSSSAAAARGAAAGAATEGRKGGGGGSGRIPYDS
FLTTCLKSAVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair