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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 670 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 669 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791347.7621365-CDS-P-littoralis_Contig647:62350..62608 | 1680791347.7621365-CDS-P-littoralis_Contig647:62350..62608 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig647 62351..62608 - |
| 1680791347.7734659-CDS-P-littoralis_Contig647:63556..63833 | 1680791347.7734659-CDS-P-littoralis_Contig647:63556..63833 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig647 63557..63833 - |
| 1680791347.78582-CDS-P-littoralis_Contig647:69325..69459 | 1680791347.78582-CDS-P-littoralis_Contig647:69325..69459 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig647 69326..69459 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig647.10.1 >prot_P-littoralis_Contig647.10.1 ID=prot_P-littoralis_Contig647.10.1|Name=mRNA_P-littoralis_Contig647.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
NDEEEQQQQRIATNGHCTIFTDQTAGGDLETGTLLRFAPNSRGVGLRSTR
RTKQEYSRRYRLLLIERSKRAKKQKNEGRTFVVRENNNASCHERGEGFLR
KKILNHGDMANRRNMHFIDDGDEHPAPRNCRKSAAMEQQGPGPHLLSSSK
RAKRTVWISSGFGYQQPAAVAAAAAGAGAAVAGAAGAGAPVGGKRSGDDD
DGGNRPVGGGGSGGGFGGGSEQP back to topmRNA from alignment at P-littoralis_Contig647:62350..69459- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig647.10.1 ID=mRNA_P-littoralis_Contig647.10.1|Name=mRNA_P-littoralis_Contig647.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7110bp|location=Sequence derived from alignment at P-littoralis_Contig647:62350..69459- (Pylaiella littoralis U1_48)
AACGACGAGGAGGAGCAGCAGCAGCAACGCATTGCAACGAACGGACATTG
CACCATATTTACGGATCAAACAGCAGGAGGAGATCTCGAGACAGGAACTT
TGCTTCGCTTCGCTCCAAACAGCCGGGGTGTCGGGTGAGTGGTGCAAGAA
CGTCTAAGCGCAATGCGTTGTGAATTGTGTCAGTTCGAACTCGACCTATT
ATTGTAAGGATACATCAAATTTGTCTACTGCTCTGTACTTACTTGTGCTC
TGCAAACGCTAGAGGCAGTTGTAGATCCGCTTTGGTTGTTACGATGATGT
TGTTTGGTCTCTCCTCTCTCCTCTCCTCTTTCTCTGTCTTCTGCCCCCTT
GCTGTGCGCTTGTTTTTTGTCAAGAGAAAAAGAGAGAAGGCCGCAGAAAA
AGCAGGCTGGATAGGCAAATAATGGCCCGCAGAGAGAGGGGTCAGTGCTG
TGCCCCTCCCCTCCGCCTGATAAAGACGGTCACGTGTATGACGCGTTTGA
CATTTATTTATTTGACCGAAGGCTCACAGTCGGGTGAGAGACCTGGAGCA
AGAAGAGCTGCTATTATTGCTGCTGGACAGCAGTTGTAGGTAGTTGTGGA
GTGAACAACAACGACAACAACTTACACCACCTACAATGCAATAAAGTAGT
CATTCTCCTACTACTACTGTAAGTTAACAGACATCCATCCACACTGAGTG
TATACATATGTATCTCCGTCGGTTCCACACAGGCATCGCACGCCGAAGAT
TTGCACGCACGACAAAGTTTTGCCTTTTTTCTGCACACACGTAGCAGTAA
TACATTATCGCAGCGTGTTTCTGCACCTCATACCTCTGCTGCTGCTGCTC
TGCTTCTGCTGTGTTGTATAATAAGATACGATAATAAATTCTCGGCAGAC
GTTGTTTATTCACACGCGTGTTCCGACCGAATGTAAATTACAACAGTGTT
GACGATCGTTATTCCGGCAGCTCACCGCTCGGCTCGCTGACCTTGTCCTT
AATGTATTAGACTATATGTTTTATGTACGAAGTCTATGAAAAGGAATGAT
ACTTGTGTGGTGCTATCCAGCAGTCCGAAGCACACACAGCCGTATACATT
ACTTAGTGTACAACAGGGAAAGGGGCTGACGAAAGGTTATATGGAGTACT
TCGTATACATGATACGAAGACACACTGGCACAGCGGGGTTCCGGGTCTTT
GTGCTTCCTCCTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCGACCTTAGCTCGGCGGATCGAGCATATAAATAATAACTATCATAGTGC
CCGATGTCTTGTCTGCAGACTCACACTTTGGCAGCCCGCAAGGCAGGCGG
TACTATCAAGATACAAGTATAATTAATTCCGTGGCCCTGGGGGGCGGGTC
CTTCCTGCCTAAAGAGTACTTCGTATACACAAGTGCTGTACTGCCTGTGT
TGTATGGTACGCCGTGTGTCGTATTGTCCGCACACCTCCTCGTCATATGC
ACAGCAGTGACGCAATCCGAGAGGCAGACGGGGCACGGGTTGTATAGTCG
CGCGTGCCACAACAAGCCACGTACGATATCATGCGACAGGAAGGCCTTTC
TTTCGTTTCTCCGCGTGTGGTGGCCGTGTGTGGTGTGGTGTCGAACGGTT
GCTGAAATGGTTTAGAACACGGTGTGTCGTGTGACATTGTTTGGCAAACA
TACTGAAACATAAATATGATAGGTCTGCAAATCAACGCAGTAGCATGTAC
CAGGTATCATGTGAACAATCCTTATACAACATGTGTGTTTGCCGTATACT
CAGAGTATATACAACGAGACAGACAGCAGTAGACTACAGCAGTAGCGTAA
TATGAACATATGATATGATATGATATGTGGATTCGTTCGTTCCTTATTTT
TTGCTCTGTGCAAGGATATCATTTGCGGGAAAATAAAAATAATAAAAATT
ACGGCGGAATATGATACTGTATGTACGTTGTGCACACGGAAGAATTGTTT
ACTGACGTTGCTGTGTCCGGTTCGTGCGCTGTGTCGAATCAACAATAAGT
CCTCATCGTGTGTGTCTGCTGTGTCTGTATTTGTATGTGTGTCATGTCTC
TTGTTGCCTGCGTGCCTGTGTGCGTGTTGTTTCACAATCGATGCATCGAT
GCTGGGCACCAGTCTACACTTTTCTGGTACAAAAAAAGCAGGGCGCACCA
CAGCCAGCCGCCGTCACACAGGATAGACAGAGAGCGGAGGTGGGAAGAAC
TACACGGTCGAGTGGATCCTCACATCATACTTGTGTATCTGCCTCACAGC
ACACACACATACATGCATTTTATCTTCCGATATTTCAGAGATGGATTTAT
CCGTGATCGTAACACACATGGTTGATCATATGCACTTAAGTGTCTTGTCG
TGTCTTCACATTGAAAACCGTTCCGCGATCTCTCCTCAATACCTCGAATG
TCCGTACTGCTGTACTCCTCCGATCATGGACGATTTCCTTGGTCGGTCAC
ATGCTGCTTTCCCAAAAGTACACACACGCTGGAGATCCCTTCAATCCACT
GAAGAATGAAGGTGTTCGAACATTCGTGCGCAGGGCTGTGCCATGCTTGG
CGAAGTGTAGATGGTTCGTGAATTAGACTTGCTTAACTTGGATCATGTTG
GTCACCCCAACACAGAGCCGGGTGCACACGAGCACGAGTGAGGCTGAATC
TTATGGTACAGTACACCGATTTTGAGACACAGGTTTCCAAATCTCGTTGG
GTCAAAATCGGTGGGCCCACAGGCTGACTGTGCGTCTTATGGGACACACC
GTTTCTGTTTGATAATCAAGCTTGTCGATTTCAGCCCTGGTTTTCAGCGT
CCTCCAGAAGCGTTTTGCATCAGGGACATCAACAGAGAACAGCCGCACCG
CGCACCGAACACCACGTAGATGTAAGTCGCTACACTGACACGGAGAGAAC
ACCTATGCTCTTCTTGTTGTTTCAGCGTCCTCCATCACGGGTCGGTGTGG
GGTTTGGTTGCGGTTTGCGTTTGGGTTTGGTGCTGTGCGCTTGTCACGAA
TGCAATCAACAACAACAACAACTGAACAAAGAATAAATACAGCAGCACCA
GTAGCTCGGGGATCGATGCGGTGCAACCCCGCTATGTTGGTAGAATCGTC
AAAGCTCAAATCTCGTGGGCCAGATCTCGTGCGTGGAGACACACACGAGA
TTTGGGCCCAAAACCGGTGGGACTGGCTCCCCGATTTTCGTTCACAGTTT
TTCAAACCTCGTTTTGCCCAAAATCTGTATCCATGAGGTGGACCAAATTC
TTTTTCAACGAGGTTCGAAAACCTGTGGCTCAAAAGCGGTGTGCCGTAAG
ATCCCGCCTGAAGACTGCTGTGGAACAAACCACAAGGACGTGGCGCACTC
AACACTTCAGACAGGGGCCACCCATGGTATCTCACGAGACCTTTTGCCAT
ACACGTGACCCCCCGCAACGTTCCAGAATATTCCAAAATCTCCGTAGAAC
TGCCCAGTACGATACAATCACATGCTGCTGCGAGTATATCCAACAGAAGG
TATATACGACAAGGTAACCCCGGCGAAACAAAACGGACCCCGATATACAA
GTGACATACCAAGTACGGAGTATATCACAGAACGCTGTAACAGTACAAAA
ATCGGTACAAAATGGAACGAAAAAAGGGAGTATGGTCCAGAGCAAACAAA
AAAAAAATGAAATTCAAAAGTCACCAACAACAGAAGAAATCGATTTCAGT
TGGCGAAGGACCAGGTGTGTCGAGAAATATGGGCATCGGCGGACTTGCAG
CTCTCACTTTTCACCGACCCAGTGTCAAGTAATTTCTAGGCAACCAAGGG
TGAAAGGGTAAACAAAGGCAGAAAGGCATCAAACACAACAATAAAATTTC
GAGGTACGAATGTATGTATGTACTTACTAGAACGCAGAGGCTGCGGTAAC
GGAACGAGGAGGGGGGGAGCACTGTGATTCTGGAGGGGTTAGGCTAGACA
GGGTTTCTCAGTGCGATCACAGCAATGTCAGTCTTTCTTGTAACAAGTAA
ACGCTTGTCGTACTCCAACATACCTGCACAAGTACCATATACATACTTGT
ACCATATGATCGTCGTGTGAATAATACGCATACACATTAACACACGAAAA
TGAAATGTTTTGGGCGAAGACAGCCAGCTTCGTGTCAGAAGCATGGGCAG
AGAGAAAGGTTGACCCCAAGACCTTGTATATTAGAGAGAGAGAGCTCCCA
TAGAGTGAGACATCACGTCCCATGACACACATACCCGAGGGTCCCCATAG
ATCAGTATCTAGTGCCGGGTACCCCCAGACATGAAATGCTACAAAAAAAG
AAATAAGATGTCTTTGTAAGAGTATAAATAAATAAAATAAAAAAGACAAG
AAGAGCGCGCACGACGAAGAAGCTGATAGTATCCTGACTGAGGGAAAACC
TGAATTTTGAATTTCGTCAAGAAGATCCCGAGTGACTCTGCCCTCTTCCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGTATGGTGTCGGTAT
ACGTACAGTAGCCTACCATGCTGGACCTGTTGGTGTTGGTGTTGGTGTTG
GTGTTGTTTGTTGTGTCGTGCACCCTCATCCCCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATCAAAATTAA
ACAGAGGGAACAATCGATCCATGTTGAAATCGAGGAACAACCCCGTACAA
GTGGCATGATATACATATGAATGCCACCTTAGAAGGCATTATTTATTGTG
CTCGCAAAACAGAGGAGGTGCAAAGTAGCAAGCAACCATTTTGTACGAGG
TAGAGCATCAACCCGTCTAAATTTTTGGGACCCGGGTACCGGGTACCCGT
CTGGGCTCGAGGGGGGCTGTACCCGACCAACCGGGTACGTACCCGGGTAA
TTGGGAAGTGGAGAATCGTTCCGAGATACAGTAGCACCCCGAAAAACCAA
CGAATTTCTTTAACGAACGTTTCATGGCATTGAGAGACGAGGAATGGGGA
TTTTATGAAAAACACAAAAAAAATGCATCTGACATGTGAATGCCAAGGGC
TATCAAGAAATGAAGTCGCCATCGATAAGAGACGTCAGGCTTCCGACTGT
AGGGCCAGAATCGAGGGGAACTATCGCGGAACGACTCTGGAACACGGTGC
CCCCTTCCCCCCGTATTTTTAGAGGCTACAGTAAGATACGTCCTGACTAT
AGAAAGCACATACCAGACACGATAGCGCCGCCACCGAGAATCTCCCTCGT
TGTTTTATCTCCTGTTGTGGCGATCATACCGCTACAGCCGTATCACTAGC
CATGACCTCTCGTCAACAGGTTTTTGTAGTCCGTTCGGACGGGTGGGTTC
TGCTCCAGGCATCACAATTTTTTGTGCTCAACAGTCAGTCGGCAGCTTTT
GTTTTCGTCGTGGAAACGTCTAGGCTAAATCATGTTCAATCATGTTCCTA
TCAATTGCCGGGTTGTTGCAGCATTGATATTTTATTATGGCAGTGAAGCC
GACCCCCCACCCCCCACCCCCCCCCTACCGACAAATCAACTAATCACCCC
CCCCCCCCCCCATCTTCGTTAGGCAGGCTGCGTAGTACACGGCGGACAAA
ACAAGAATACAGTAGGCGATATCGGCTGTTGTTGATCGAAAGATCGAAAA
GGGCGAAGAAACAAAAAAACGAAGGTCGCACGTTCGTGGTGAGAGAGAAT
AATAACGCCTCTTGCCACGAACGGGGGGAGGGGTTTCTAAGGAAAAAAAT
CCTCAACCACGGCGATATGGCCAACAGGAGGAACATGCACTTCATCGACG
ACGGGGACGAACACCCTGCTCCCAGGAACTGCAGGAAGTCTGCTGCTATG
GAGGTGAGATAGCGTCGCTTTTCGCTCTGCGCGGCCCACTCCAGGCCGTT
GTTGTTGTTGTTGTTGTACTTCGAAGTACGTTTTAGTCCCTCCTCCCTCA
TGTACAAGTATATTGCTTTCCTTTTCAACTCCACCCCACAAACATGCCCC
ATAATTTCAATGGTGTTAGCTCTGGCTTCACGAGGACTGATGCATGGCAC
GCAACATAGTAGTGGGTAACCCCCCTCCTTCTTGAATTGCTGCTACTAAT
GCAGCGTGTTCACTGCGAGTAGCATCATGAACAAGCCTTTGTTGGTGAGC
ACTTATTCACAGAGGACGTATGCAAGGAAATGTACAAGTAAATAATCATG
AGCTTTTTTTTTTTGGTGGAGAACAAAAGACGCGGCTCTTACTTGCGCAG
TTCTTTTCACACACACGCCTCTTTTCATTTCACACACACGCCTCTTCTCG
TTTCATACACGCCTCTTTTCATTTCACACACGCCTCTTTTCATTGCACAC
ACACGCCTCTTTTCATTTCACACACACGCCTCTTTTTCATTTCACACACA
CGCCTCTCTTCATTTCACACACACGCCTCTTCTCGTTTCATACACGCCTC
TTTTCATTTCACACACACGCCTCTTCTCGTTTCATACACGCCTCTCTTCA
TTTCACACACACGCCTCTTTTCTTTTCACACACGCCTCTTTTCATGAATT
CACTTTATTTTTTTAATTTCCTTCGAATAGAGGCATGTCTGTACGAATTC
CATACACATATGCTCCATTAAAATAAACCATACTTCGAAGTGTATCTAAA
ATGAGTAGGCGCTTTTTTTTGTTTTTTTATTCACCACTTCACGACTCACT
CAGGCTTTTCGCACCACCAACGGCCTACAGACATACGAGTTCACGTGAGT
GAAGAGTGAAGTCAATCCACACCTACCTGTATGCTTTTTACCTGAAAGCA
GCAACAGGGACCGGGACCTCACCTCCTCTCTTCGTCCAAGCGAGCCAAGA
GGACGGTGTGGATCTCCTCGGGCTTCGGATATCAGCAACCGGCCGCTGTC
GCTGCCGCCGCCGCCGGTGCCGGTGCCGCCGTTGCCGGTGCCGCCGGTGC
CGGTGCCCCCGTCGGCGGAAAGAGAAGTGGCGACGACGATGATGGCGGAA
ACCGGCCAGTCGGCGGCGGTGGGTCCGGCGGCGGTTTCGGAGGAGGATCG
GAGCAGCCGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig647:62350..69459- >mRNA_P-littoralis_Contig647.10.1 ID=mRNA_P-littoralis_Contig647.10.1|Name=mRNA_P-littoralis_Contig647.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=669bp|location=Sequence derived from alignment at P-littoralis_Contig647:62350..69459- (Pylaiella littoralis U1_48)
AACGACGAGGAGGAGCAGCAGCAGCAACGCATTGCAACGAACGGACATTG
CACCATATTTACGGATCAAACAGCAGGAGGAGATCTCGAGACAGGAACTT
TGCTTCGCTTCGCTCCAAACAGCCGGGGTGTCGGGCTGCGTAGTACACGG
CGGACAAAACAAGAATACAGTAGGCGATATCGGCTGTTGTTGATCGAAAG
ATCGAAAAGGGCGAAGAAACAAAAAAACGAAGGTCGCACGTTCGTGGTGA
GAGAGAATAATAACGCCTCTTGCCACGAACGGGGGGAGGGGTTTCTAAGG
AAAAAAATCCTCAACCACGGCGATATGGCCAACAGGAGGAACATGCACTT
CATCGACGACGGGGACGAACACCCTGCTCCCAGGAACTGCAGGAAGTCTG
CTGCTATGGAGCAACAGGGACCGGGACCTCACCTCCTCTCTTCGTCCAAG
CGAGCCAAGAGGACGGTGTGGATCTCCTCGGGCTTCGGATATCAGCAACC
GGCCGCTGTCGCTGCCGCCGCCGCCGGTGCCGGTGCCGCCGTTGCCGGTG
CCGCCGGTGCCGGTGCCCCCGTCGGCGGAAAGAGAAGTGGCGACGACGAT
GATGGCGGAAACCGGCCAGTCGGCGGCGGTGGGTCCGGCGGCGGTTTCGG
AGGAGGATCGGAGCAGCCG back to top
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