prot_P-littoralis_Contig646.22.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig646.22.1
Unique Nameprot_P-littoralis_Contig646.22.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length352
Homology
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BLAST of mRNA_P-littoralis_Contig646.22.1 vs. uniprot
Match: D7FZQ8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ8_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.100e-23
Identity = 91/279 (32.62%), Postives = 135/279 (48.39%), Query Frame = 0 
Query:   84 VVEVAKIWRNSRGKFDWSDLHHALHATAMHAVDMGLTRDQRILEKFMFRRICVLRKFSCPKLTLAVFTDKLLNKRGVDKAQLDQDSKDARALQKAFGVAGGASAAGGGASHSS-------RSRGGLTSPAPMHFGGGALPQHGGPRLSAYVPSTRGGGSRSAGFGVGQPVMLPLVPGAPGGQPGSKGR--GAGRTAPGGDHTS--SQPLSGRARSAVADFNGIMQDAQQQFVPVPNGSTCDKCANANPAKNPHHEFRACAFSLCSRCKRGGHRAKVCPF 351
            ++ + +I RNS   F   DL   L A    A ++GL   QR+L++ +FR   +L     P+  L+VF+ KL N +GV    L  D ++ + ++K  G  G AS      +H +       R+RGG+  P+P      A    G PR ++   S+           +  PV+LPL       + G+ GR  G G   PG    S  S   S R  +A+ADFN  +Q  Q++   +P G  C+ CAN   A+N  H    CA+S+C+RC RGGHRA  C +
Sbjct:  154 LLRIKQIMRNSDKFFSRDDLDAVLLAAIRLAAEIGLVDTQRVLQRTLFRGRKLLDASFDPQSVLSVFSRKLSNAQGVTAETLLGDLQEMKLVRKMNGRHGQAS------THQTTTKPSYARARGGIPFPSPYAAAAPAGSVAGPPRAASMAVSS-----------LPAPVVLPLPK-----KKGASGRKRGGGLRGPGAGSLSGPSPQRSPRELAALADFNAQIQAVQEKLPEIPGGPQCNNCANK--ARNRFHHHFTCAYSICTRCGRGGHRAAACTY 408
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig646.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZQ8_ECTSI2.100e-2332.62CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig646contigP-littoralis_Contig646:68016..74143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig646.22.1mRNA_P-littoralis_Contig646.22.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig646 65230..74862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig646.22.1 ID=prot_P-littoralis_Contig646.22.1|Name=mRNA_P-littoralis_Contig646.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=352bp
MAKDCDNSQYTQLVHALCGQGKGQLTVRWTPSRRSDNWLALADWRVRRGH
QDRAELVRRGEGRRRADPGPQPATRAPPPRRQLVVEVAKIWRNSRGKFDW
SDLHHALHATAMHAVDMGLTRDQRILEKFMFRRICVLRKFSCPKLTLAVF
TDKLLNKRGVDKAQLDQDSKDARALQKAFGVAGGASAAGGGASHSSRSRG
GLTSPAPMHFGGGALPQHGGPRLSAYVPSTRGGGSRSAGFGVGQPVMLPL
VPGAPGGQPGSKGRGAGRTAPGGDHTSSQPLSGRARSAVADFNGIMQDAQ
QQFVPVPNGSTCDKCANANPAKNPHHEFRACAFSLCSRCKRGGHRAKVCP
F*
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