mRNA_P-littoralis_Contig646.18.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig646.18.2
Unique NamemRNA_P-littoralis_Contig646.18.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 1.790e-158
Identity = 240/402 (59.70%), Postives = 298/402 (74.13%), Query Frame = 1
Query:  871 FEQDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETWVKDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNG 2061
            F +DQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+TGVL +NI KYG LAA  DADK DL G+LTWDLMHLNK+GF+++PN GG TGL+DETTFF+P+Y  +    +++E  + +IVA QYVEMFFVS+G PEYKF VWREAVRSLSTDYIQRM+    R LA+AHPDKAFDVI T CDGA EHR FQ  ++   F  W+K  KE  F+ FKVGF HP HL  +FNMSDPMHILKKIVNALWHSDIP KQR LG+W    D +  KF +FSLKT +RV+N++EY+   ++  E++A ++ F       + R N +CMNV  S KVV GT++ AI E     E  G   D AL  Y+GLA+ +NDFVDIFNG
Sbjct:  443 FYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNG 843          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 1.970e-158
Identity = 238/402 (59.20%), Postives = 297/402 (73.88%), Query Frame = 1
Query:  871 FEQDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETWVKDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNG 2061
            F +DQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+T VL +NI KYG LAA  DADK DL G+LTWDLMHLNK+GF+++PN GG TGL+DET FF+P+Y  +    +++E T+ +IVA QYVEMFFVS+G PEYKF VWREAVRSLSTDYIQRM+    R LA+AHPDKAFDV+ T+CDGA EHR FQ  ++   F  W+K  KE  F+ FKVGF HP HL  +FNMSDPMHILKKIVNALWHSDIP KQR LG+W    D +  KF +FSLKT +RV+N++EY+   ++  E+ A ++ F       + R N +CMNV  S KVV GT++ AI E     E  G   D AL  Y+GLA+ +NDFVDIFNG
Sbjct:  534 FYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNG 934          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 2.100e-145
Identity = 232/445 (52.13%), Postives = 295/445 (66.29%), Query Frame = 1
Query:  859 PCLAFEQDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGAS----------------------------------------EHRCFQARSSSEKFETWVKDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFN 2058
            PC    QDQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN+++N+LHLPS  R+KQLRR A PP+TGVL +NI K G LAA  D DKADL G+L WDLMHLNK+GF+++PN GG TGL+DETTFF+P+Y  +    +++E  + +IVA QYVEM+FVS+G PEYKF VWREAVRSLSTD+IQRM+    R+LA+AHPDKAFDVI TVCDGA                                         + R FQ  ++   F  W+K  +E  F+ FKVG  HP HL  +FNMSDPMHILKKIVNALWHSDIP KQR LG+W    D +  KF +FSLKT +RV+N++EY+   ++  E++A ++ F     + + R N +CMNV  S KVV GT++ AI E     E  G   D AL  Y+G    +NDFVDIFN
Sbjct:  300 PCA---QDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFN 737          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 5.900e-92
Identity = 139/212 (65.57%), Postives = 171/212 (80.66%), Query Frame = 1
Query:  877 QDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASE 1512
            +DQ+RWN+   ++KGFRFHP TLRIAIYMHG+ G++ YN++ N +HLPS  RV+QL+ QA PP+TGVL DNI+KYG LAA  DADKADLTG+L+WDL HL+K+G +++P  G +TGL+DE TFF+PVY  K  E   L K +G+I+A QYVE FFVSLGNPEYKF VWREAVRSLSTDYIQRM+  T R L++AH DK FDV+ TVCDGASE
Sbjct:   63 EDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVE-FFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLSIAHRDKGFDVVATVCDGASE 273          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 7.590e-83
Identity = 168/400 (42.00%), Postives = 230/400 (57.50%), Query Frame = 1
Query:  895 NSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQT-GVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLID-ETTFFHPVYNEKNHEGED----LEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETWV--KDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVI---AAITEKMEEHGWDGALAGYKGLAIEMNDFVDIFNG 2061
            N   G  KG+R+ P  +R   Y    +G + Y L+ ++LHLPSI+ V + RR  R   T G+  D I+ +G +AA  +  + DL GIL WD MHLN +GF   PN GGI+GL+  ++  +HP+   +  +G D    LE T+   +A QY+E+++VS+GNP+YKF V+REAVR LS   I RM+      L  AHPDK  DVI TVCDGA EHR FQ + ++  F  W   K   E+ F+DF + F HPHH   +FNMS P H+L  +VNALW+S +P KQR L      RD E  ++  FSLKT E V+   E  G  LS  E ++ +  F      +  R++H+CM+V  S K V  T +       EK+     +G +A Y  LA  MNDF+DI NG
Sbjct:   81 NEREGPKKGWRYSPKVVRWYCYALAKMGKAGYALIRDILHLPSISTVNRARRAGRGTATWGLQHDLIEAHGKMAAEENLGRFDLAGILCWDCMHLNTNGFTVRPNGGGISGLVSGDSVLYHPL---EAVQGVDKTISLEDTLETFMATQYLEVWWVSIGNPKYKFCVYREAVRGLSGPKISRMLDEIMLRLYEAHPDKKIDVIGTVCDGAGEHRSFQTKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQEKLASP--NGEIACYAELAEVMNDFLDIMNG 474          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 3.920e-81
Identity = 170/425 (40.00%), Postives = 239/425 (56.24%), Query Frame = 1
Query:  877 QDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKA--------------------DLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFF-HPVYNEKN-HEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETWVKDDK--EKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDL-GVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGT---VIAAITEKME--EHGWDGALAGYKGLAIEMNDFVDIFNG 2061
            ++ +R+N   G+AKG+RF+   LR A Y    +G + Y ++ ++LHLP I  V+++   +   + G     I+ +  +A   +   +                    DL GIL WDLMHLN++ F   PN GGI GL+D  +FF HP+   +   E   LEKT+   VA QY+E+F+VS+GNP+YKF V+REAVR LS   I RM+      L  AH DK FDVI TVCDGA+EHR FQ   ++  F  W K D   E+   D+ V F+HPHH G +FNMSDP+H+LKK+VNALW+S +  K+R L  +W +    ++ +   FSLKT E+ + E E      +  E++A +  F     A   RD+H+CM+V  S K V  T   VIA+   K+   +    G LA Y  +A  MNDF+DI NG
Sbjct:  271 EEMMRYNQHRGSAKGWRFNAKVLRWACYALAKMGGAGYQVLRDVLHLPHIKHVQKIVAASTSTKMGEQYHLIEAFAKMACEDNXSTSRYVELFWFYSLLWRPYGLVFDLLGILVWDLMHLNQNDFRVCPNGGGIEGLVDRDSFFRHPLDAVQGVDEHITLEKTLETFVATQYLEVFWVSIGNPKYKFCVYREAVRGLSGPKISRMLDEITNKLYEAHEDKKFDVIGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLT-DAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNG 694          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.970e-55
Identity = 90/147 (61.22%), Postives = 118/147 (80.27%), Query Frame = 1
Query:  871 FEQDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRI 1311
            F +DQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+TGVL +NI KYG LAA  DADK DL G+LTWDLMHLNK GF+++PN GG TGL+DETTFF+P+Y  +     ++E T+ ++
Sbjct:  401 FYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKSGFSFTPNGGGFTGLVDETTFFNPIYKHEGGVVREVEPTLEKL 547          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: A0A6H5KQL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.320e-53
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 1
Query:  886 VRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQT-GVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFF-HPVYNEKN-HEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQ 1527
            + +N   G++KG+RF P  LR A+Y    +G++ YN++ ++LHLPSI  ++++RR A    T GV    ++ YG +AA  +  + DL GIL WDLMHLN +GF   PN GGI GL+D  +   HP+   K   +   LE+T+   VA QY+E+F+VS+GN +YKF V+REAV+ L+   ++RM+      L   H DK FDVI TVCDGA+EHR FQ
Sbjct:    2 MNYNKFQGSSKGWRFSPKVLRWALYALANMGSAGYNVIQDVLHLPSIGHLRKVRRAAAGTTTWGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVADNISLEETLETFVATQYLEVFWVSIGNLKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTVHEDKQFDVICTVCDGAAEHRSFQ 218          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.540e-50
Identity = 102/205 (49.76%), Postives = 134/205 (65.37%), Query Frame = 1
Query: 1330 EMFFVSLGNPEYKFAVWREAVRSLSTDYIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETWVKDDK--EKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDKQRDLG-VWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTK 1935
            ++F+VSLGNP YKF V+REAVR L+   + RM+     +L  AH DK FDVI TVCDGA+EHR FQ   +   F  W + D   EK   DFKV F+HP H G +FNMSDP+H+LKK+VNALWHSDIP KQRDL  +W +E   E  ++  FSLKT E+V+ E E  G   S+ E++A +  F      ++ R++H+CM+V  S K
Sbjct:   58 KVFWVSLGNPTYKFCVFREAVRGLTGPKLARMLDDIMTSLYQAHSDKNFDVIGTVCDGAAEHRSFQKYLAEIAFSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEA-AEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261          
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.150e-43
Identity = 75/128 (58.59%), Postives = 99/128 (77.34%), Query Frame = 1
Query:  958 YMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFF 1341
            YMHG+ G++ YN++ N +HLPS  RV++L  QA PP+TGVL DNI+KYG LAA  DADKADLTG+L+WDL HL+K+GF+++P  GG TGL+DE TFF+PVY  K  E  DL+K + +I+A +YVE  F
Sbjct:  149 YMHGVAGSAGYNMLRNFIHLPSPRRVQRLEAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYVERTF 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig646.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FZI2_ECTSI1.790e-15859.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVF4_9PHAE1.970e-15859.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5M0_9PHAE2.100e-14552.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5R1_ECTSI5.900e-9265.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z3_9PHAE7.590e-8342.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP1_9PHAE3.920e-8140.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2I2_ECTSI1.970e-5561.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQL9_9PHAE2.320e-5345.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK65_ECTSI1.540e-5049.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVM8_ECTSI1.150e-4358.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig646contigP-littoralis_Contig646:40365..43858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2063
Hectar predicted targeting categoryother localisation
Exons6
Cds size1101
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig646.18.2prot_P-littoralis_Contig646.18.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig646 40365..42719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791346.6463122-CDS-P-littoralis_Contig646:40364..404901680791346.6463122-CDS-P-littoralis_Contig646:40364..40490Pylaiella littoralis U1_48CDSP-littoralis_Contig646 40365..40490 -
1680791346.6580021-CDS-P-littoralis_Contig646:40698..411191680791346.6580021-CDS-P-littoralis_Contig646:40698..41119Pylaiella littoralis U1_48CDSP-littoralis_Contig646 40699..41119 -
1680791346.6776054-CDS-P-littoralis_Contig646:41505..416871680791346.6776054-CDS-P-littoralis_Contig646:41505..41687Pylaiella littoralis U1_48CDSP-littoralis_Contig646 41506..41687 -
1680791346.6906788-CDS-P-littoralis_Contig646:41851..420881680791346.6906788-CDS-P-littoralis_Contig646:41851..42088Pylaiella littoralis U1_48CDSP-littoralis_Contig646 41852..42088 -
1680791346.7122037-CDS-P-littoralis_Contig646:42584..427191680791346.7122037-CDS-P-littoralis_Contig646:42584..42719Pylaiella littoralis U1_48CDSP-littoralis_Contig646 42585..42719 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791346.7274377-UTR-P-littoralis_Contig646:42719..432451680791346.7274377-UTR-P-littoralis_Contig646:42719..43245Pylaiella littoralis U1_48UTRP-littoralis_Contig646 42720..43245 -
1680791346.7380605-UTR-P-littoralis_Contig646:43424..438581680791346.7380605-UTR-P-littoralis_Contig646:43424..43858Pylaiella littoralis U1_48UTRP-littoralis_Contig646 43425..43858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig646.18.2

>prot_P-littoralis_Contig646.18.2 ID=prot_P-littoralis_Contig646.18.2|Name=mRNA_P-littoralis_Contig646.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=367bp
MHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNL
AAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVY
NEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKFAVWREAVRSLSTD
YIQRMVFSTARALALAHPDKAFDVITTVCDGASEHRCFQARSSSEKFETW
VKDDKEKPFSDFKVGFRHPHHLGVIFNMSDPMHILKKIVNALWHSDIPDK
QRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVS
TFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITEKMEEHGWDGALAG
YKGLAIEMNDFVDIFNG
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mRNA from alignment at P-littoralis_Contig646:40365..43858-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig646.18.2 ID=mRNA_P-littoralis_Contig646.18.2|Name=mRNA_P-littoralis_Contig646.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3494bp|location=Sequence derived from alignment at P-littoralis_Contig646:40365..43858- (Pylaiella littoralis U1_48)
AGGTTCTGCACGCGGTGGAATGTGTACGGCCTTGTGAGGGAGTCTGCCGA CGTCATCTCGTGGAGGACCAGACGTTGGATCCCGAATGCGCAAGGCATTT CGGAAGTGTGACGCGCATGGCTCAACGCACACTCGAGAACAGTCCGGACG CTCTCGTTGGCGACGACCGCTGGGCCTCTGCGAACGTAAGGGGATTCCTC AAAAGCCCCAACGGCTGTGTTTCGGGCGTACTGGGCCTGCGGGGTCACGA CGATGTGCTGTGGTCAAGGCGCTGTCGTGGTGTCGCTACGAACGTGGATG GTAGCTTAGGGGTGTCGCGATGTAATGAGTGCAAGGATTTCTACCGCCGT TCGGTGACCAGGCGAACGATCCAAGCTGCGAAGCACACTCCGGACAGATC CACCAGGATCGGAGACATGAGCACTGGCCAAAAGGTGAGAAAACCAACTT AATGCAAGCATGCCGAAGTTTACTGGGATAGGTCCTCTCTGAATGCTCTC TTCATCTATATGGCGCATTCCGTCCTGTAATGCAGTATATACTTGCGGGA TTTTGTGGTGCATTTGTTGAAGTGTATCCGCACGTCCGCCATGCGTCCCA CAAACTTCCTCAGGAGAGGACGATCCATCTGATCAACCGGGACAGGAAGA AGAAAGCGGCGGAGATTGCGCGACTGCGGGAGGAGCTGCACGTGGCCCGG AAGGATTTCGTCAAGTTCAATAAAAAACAAGGCGAGGCTCTCCACGAGCT CTTCATGGACCCCAAGTCCAAGGAGGTGCTCTGCACCAAGCTCCCGAAGG ATAGCGCCGAACGAGCGATATACGAGGTACGCCGTTTTCTAGCCTCTATC GTTGACTCTGTCGTCGTTTGGAGTCTGTTTTATGTTTGGCTGCATGTACT TATGGTGATGCGGGTTCAACTTTTACGACACCAGGTATTCTTATTGCTTA TAGCATACGAATGCATGCTTGTGTTTTGTTTTGTTTGCCGTTATTTATTT ATTTTCATCTTTCCAACGTATCGTGTGCTTTTGGCGTCCTTGCCTTGCTT TCGAACAGGACCAGGTGCGGTGGAACTCGACGCACGGAGCTGCGAAGGGG TTCAGGTTCCATCCGACTACCCTGAGGATCGCCATCTACATGCACGGGAT GATTGGGACGTCGGCGTACAACCTTGTGAGCAATTTGCTACACCTACCCT CCATCGCACGCGTGAAGCAGCTTCGACGGCAGGCGAGGCCGCCACAAACG GGAGTGTTGCGGGATAACATCAAGGTACAAGTGTTGCAGCACAGCCAGAG TTGCAGCTTGTTGGATCGGGTTCCGCCCGTTCTGTTCTCGATATGCGACG GAGTGGTTTTCTCTGTTGCCAGATTTACGGATTACTTTCAGCGCTGCTGC GAACCATATGGTGCCCTGTGGGCTCGTTGATGTCGACAAGACATCCTGAA AAGTTTTTTTTACCCCTCTACACGCGAAGGGTTGTACAAAAGTATGAATC ATACTATTGGGTCGACTTGCCGTGCAGGAGGTGTGGGCGCACAAAGCTGA AATCTTGTTTATCGAAAGTCAAGACATGCAGGTTCTCGTTTGGCAATCCG TTAGGCTAGATCGAGTATGTTTGCGCGCGCGTAGCTGGTACTTCACCCGC CACTTCGCAACGTTGATTCCCGCCGCTGGCTTGGCTTTGTTGGGGCGGTT CGTTTCTCACACTATTTCGACGTCCCGATCCCCCGGCCCATTTCTGTTTT TGCTGTCTATCCCATTGTAGAAGTACGGGAACTTGGCCGCACACCACGAC GCCGACAAGGCCGATTTGACCGGCATCCTGACCTGGGACTTGATGCACCT GAACAAGCACGGCTTCAACTATTCCCCCAACGCCGGTGGCATTACGGGGC TAATAGATGAGACGACGTTCTTCCACCCTGTCTACAACGAGAAGAACCAC GAGGGCGAGGACTTGGAGAAGACGATCGGCCGAATCGTCGCCAACCAGTA TGTCGAGGTACGTAATGACGTAGTGCTTCTTCCCGTCCGCTTTGCGCCAT TTCCTCCGAGAGATGAAAGGGTGGAGAAGGGTTTTTCGACAGCGGGCGAA TTTCTCAACGCGTGTTAGGGTTAAACAGAAACTGATCTCCCTCAACCTTC CCCTTCTCTCGTGTGTTGCAGATGTTTTTCGTTAGCCTCGGCAACCCGGA GTACAAGTTCGCTGTGTGGAGGGAGGCGGTGCGGTCGCTCAGCACCGACT ACATCCAACGGATGGTGTTCAGCACGGCGCGCGCTCTCGCTCTCGCCCAT CCCGACAAAGCGTTTGATGTCATCACCACGGTCTGCGACGGCGCCTCGGA GCAGTAAGTTGCATCGTCCGTTTTTGTCCTCGGAGCACTTCACGGTCCTC CACCGCTTGTCCGATTTTTCCCTTGAAGGAAGTTGAAACTTGAGATAGGC TTCGAACTATCCGTCGGCAACCTCCTGTATTTTTCTTTCGCCGCAGATGC TGTAGGCTTCCCCGTTTCTATAGTTTCGCGGGTGTGGATGTTGTCATGAG TCCACTCTATGTCCACTCTGCTTTTTGGCTTCTGTTTTTAGCTTTGCTGC TTCCGCCGGCCTACTTGTGAGCAGGTGGGACCCCCACCCCCCCAACTCCG TCTATGCCCGCCCTCCCTTCTCGCACAACGATACCCCTCGAAGTGTTCTT TCCCTGTTTCTCTCGGTGCCCGCCTCTGCTTTGATGCAGCCGTTGTTTTC AGGCCCGTTCTTCGTCGGAGAAGTTCGAAACCTGGGTGAAGGACGACAAA GAAAAGCCATTCTCCGACTTCAAGGTCGGGTTCAGGCACCCGCATCACCT TGGCGTCATCTTCAACATGAGCGATCCGATGCACATCTTGAAAAAGATTG TGAATGCGCTTTGGCACAGCGATATCCCCGACAAGCAACGGGATCTCGGG GTCTGGGCGAGCGAGAGGGACGGGGAGTCGAAGAAGTTCTTTCGGTTCTC ACTCAAGACTGGAGAACGCGTGTTCAACGAAATCGAGTACGAGGGGAAGC AGCTGTCCATGAACGAGAAATCCGCTATGGTCAGCACCTTCCGTCATCAT TCGCAGGCGATTTGGCGGCGAGACAACCATTCCTGCATGAACGTCTCCCA CTCCACGAAGGTGCCGATGTTGGTGTTGGGTGCGGCTTCTGGGTGCTTCC ATCACGAAACCTAAAGATTTCTGCACGTAGTCCGGACCCCTGCGACCCGG ATCCGTTCCTTCCTTTTTTTTTCAGATGTGGGTTAAGATTGGATGTATAT GAATCCAAAACTTCGTTAAGGGGGGTTCTGATGGTCTCGCATATCCCTCC TTCCGTTGCGTGAAACAGGTCGTAGGGGGGACGGTGATCGCGGCCATCAC CGAGAAGATGGAGGAACACGGTTGGGACGGCGCCCTTGCGGGCTACAAGG GGCTAGCCATCGAGATGAACGACTTTGTCGATATCTTCAACGGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig646:40365..43858-

>mRNA_P-littoralis_Contig646.18.2 ID=mRNA_P-littoralis_Contig646.18.2|Name=mRNA_P-littoralis_Contig646.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1101bp|location=Sequence derived from alignment at P-littoralis_Contig646:40365..43858- (Pylaiella littoralis U1_48)
ATGCACGGGATGATTGGGACGTCGGCGTACAACCTTGTGAGCAATTTGCT
ACACCTACCCTCCATCGCACGCGTGAAGCAGCTTCGACGGCAGGCGAGGC
CGCCACAAACGGGAGTGTTGCGGGATAACATCAAGAAGTACGGGAACTTG
GCCGCACACCACGACGCCGACAAGGCCGATTTGACCGGCATCCTGACCTG
GGACTTGATGCACCTGAACAAGCACGGCTTCAACTATTCCCCCAACGCCG
GTGGCATTACGGGGCTAATAGATGAGACGACGTTCTTCCACCCTGTCTAC
AACGAGAAGAACCACGAGGGCGAGGACTTGGAGAAGACGATCGGCCGAAT
CGTCGCCAACCAGTATGTCGAGATGTTTTTCGTTAGCCTCGGCAACCCGG
AGTACAAGTTCGCTGTGTGGAGGGAGGCGGTGCGGTCGCTCAGCACCGAC
TACATCCAACGGATGGTGTTCAGCACGGCGCGCGCTCTCGCTCTCGCCCA
TCCCGACAAAGCGTTTGATGTCATCACCACGGTCTGCGACGGCGCCTCGG
AGCACCGTTGTTTTCAGGCCCGTTCTTCGTCGGAGAAGTTCGAAACCTGG
GTGAAGGACGACAAAGAAAAGCCATTCTCCGACTTCAAGGTCGGGTTCAG
GCACCCGCATCACCTTGGCGTCATCTTCAACATGAGCGATCCGATGCACA
TCTTGAAAAAGATTGTGAATGCGCTTTGGCACAGCGATATCCCCGACAAG
CAACGGGATCTCGGGGTCTGGGCGAGCGAGAGGGACGGGGAGTCGAAGAA
GTTCTTTCGGTTCTCACTCAAGACTGGAGAACGCGTGTTCAACGAAATCG
AGTACGAGGGGAAGCAGCTGTCCATGAACGAGAAATCCGCTATGGTCAGC
ACCTTCCGTCATCATTCGCAGGCGATTTGGCGGCGAGACAACCATTCCTG
CATGAACGTCTCCCACTCCACGAAGGTCGTAGGGGGGACGGTGATCGCGG
CCATCACCGAGAAGATGGAGGAACACGGTTGGGACGGCGCCCTTGCGGGC
TACAAGGGGCTAGCCATCGAGATGAACGACTTTGTCGATATCTTCAACGG
T
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