mRNA_P-littoralis_Contig646.1.42 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: D7FY64_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY64_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 3.980e-136 Identity = 233/383 (60.84%), Postives = 287/383 (74.93%), Query Frame = 1
Query: 1066 MGDGLNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVL 2214
M D L+IN+L QME +LE +S LERDAKVNLLKFLQV+TV++YE AYD+LY ELNM G ECL R+++L+PKS L QP+ LE QGCD DE L QL+FYR+ A AKV LDKLVRE+ +GHQG G++ EVKS EST+RKATK GGDVR++ DMAR SVIC TPEDLELA K LME +EPH + RVRNGFN+GW PSGYRDVK+N VV+GHLCEIQL L SF++LK GQH VYEWAR+LKV+TE+DA+HLFK SP IT++M+RLA+++W T F LP+LLA +Y QAEE ++RL E ARRGIE+Q++ QWRQ +L EA AA +L + L QQGKY +A+ L+ + HPN A LNNR +L
Sbjct: 1 MDDELDINELLQMEIELEGSDLS-----LERDAKVNLLKFLQVKTVKKYERAYDSLYYELNMDGGLECLHRIEELNPKSSLFQPEGLEPQGCDADENLGKQLDFYREGALRAKVQLDKLVRELVNGHQGRTGLYAEVKSLESTRRKATKSYGGDVRRLADMARVSVICDTPEDLELACKDLMESVEPHHVKRVRNGFNSGWKPSGYRDVKVNTVVSGHLCEIQLQLGSFFKLKDGQHEVYEWARELKVSTEMDADHLFKMWSPGITEEMVRLAQQNWRRTRFYLPDLLADAAQYVQAEEGYKERLSRAEAARRGIEDQENQQWRQELLVEASAACDLGVVLAQQGKYEDADALFVHVLRDLGATAGTEHPNYASVLNNRAGLL 378
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: D7G3B1_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B1_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 1.350e-128 Identity = 227/388 (58.51%), Postives = 280/388 (72.16%), Query Frame = 1
Query: 1066 MGDGLNINKLRQMEKDLEADT----------ISMRGP-SLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLN 2196
M D IN+L ++E +L+ + +S+R P SLERDAKVNLLKFLQV+TV++Y+ AYDNLY ELN G ECLRR++ KS LLQP VLE Q CD D + +QL+FYR+ A CAK LD+LV+EV +G +GC GV+P++K+ ESTKRKA +F GG+VR+V DMARA+VIC TPEDLE AY LM I+PHD+ RV NGF++ WMP+GYRDVKLN VVNGHLCEIQL L+SF+ LKAGQH VYEWAR LKVTTE +ANHL K LS E+T +MIRLAE++W GTG LP + +Y QAEE R+RL VED RRGI++Q S +WR+ + EA A SNL L +QGK EAE LY R+ I EK NHP +A LN
Sbjct: 1 MDDEPGINELLRLENELQGNAPSVWDKLFECVSIREPPSLERDAKVNLLKFLQVKTVDKYKRAYDNLYYELNKQGGLECLRRIEPAPAKSALLQPIVLEEQRCDADGEFSSQLQFYRKGAECAKEQLDELVQEVINGREGCEGVYPKIKTLESTKRKAVRFYGGNVRRVADMARAAVICNTPEDLETAYIGLMARIQPHDVKRVTNGFDSDWMPNGYRDVKLNPVVNGHLCEIQLQLRSFFNLKAGQHVVYEWARKLKVTTETEANHLIKILSREVTQEMIRLAEQNWRGTGEYLPHIQLDAAQYGQAEEAFRQRLCQVEDERRGIDDQTSNEWRENLQDEAWARSNLGFTLERQGKNDEAEALYRRSITIDEKLYGSNHPEIATDLN 388
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5KU99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU99_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.300e-127 Identity = 226/387 (58.40%), Postives = 279/387 (72.09%), Query Frame = 1
Query: 1066 MGDGLNINKLRQMEKDLEADT----------ISMRG-PSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITL 2193
M D IN+L ++EK+L+ + +S+R PSLERDAKVNLLKFLQV+TV++Y+ AYDNLY ELN G ECLRR++ KS LLQP VLE Q CD DE+L +QL+FYR+ A CAK LD LV+EV +G +GC GV+P++K+ ESTKRKA +F GG+VR+V DMARA+VIC TPEDLE AY LM I+PHD+ RV NGF+ WMP+GYRDVK+N VVNGHLCEIQL L+SF+ LKAGQH VY+WAR LKVTTE +ANHL K LS E+T +MIRLAE++W GTG LP + +Y QAEE R+RL ED RRGIE+Q S +WR+ + EA A +NL L +QGK EAE LY R+ I EK NHP +A L
Sbjct: 1 MDDEPGINELLRLEKELQGNAPSVWDKLFECVSIREKPSLERDAKVNLLKFLQVKTVDKYKRAYDNLYYELNKQGGLECLRRIEPAPAKSALLQPIVLEEQSCDADEELSSQLQFYRKGAECAKEQLDGLVQEVINGREGCEGVYPKIKTLESTKRKAVRFYGGNVRRVADMARAAVICNTPEDLETAYIGLMARIQPHDVKRVSNGFDADWMPNGYRDVKVNLVVNGHLCEIQLQLRSFFNLKAGQHVVYKWARRLKVTTETEANHLIKTLSHEVTQEMIRLAEQNWRGTGEYLPHIQLDAAQYGQAEEAFRQRLCQAEDERRGIEDQTSNEWRENLQDEAWARNNLGFTLERQGKNDEAEALYRRSIAIDEKVYGSNHPEIATDL 387
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5KBI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBI8_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 1.840e-118 Identity = 216/383 (56.40%), Postives = 272/383 (71.02%), Query Frame = 1
Query: 1066 MGDGLNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVL 2214
M D L+IN+L QME +LE + +S LERDAKVNLLKFLQV+TV +YE AYD Y ELNM G ECL R+++L+PK LLQP+ LE Q CD DE LE QL+FYR+ A AKV LDKLVR++ +G+QG G++ EVKS EST+RKAT GGDVR++ DMAR SVIC TPE LELA K LME IEP SGYR+V++N VV+ HLCEIQLHL+SF+ELK QH VYEWAR+LKV+TE+DA+HLFK SP IT++M+RLA+++W T F LP+LLA +Y QAEE ++RL + ARRGIE+Q+S QWRQ +L EA AA +L + L QQGKY +A+ L+ R ++ HPN A LN+R +L
Sbjct: 1 MDDELDINELLQMEIELEDNALS-----LERDAKVNLLKFLQVKTVTKYERAYDTFYYELNMDGGLECLHRIEELNPKPSLLQPEGLEPQRCDADENLEKQLDFYREGALRAKVQLDKLVRKLVNGYQGRTGLYAEVKSLESTRRKATMSYGGDVRRLADMARVSVICDTPEALELACKDLMESIEP----------------SGYRNVEVNTVVSAHLCEIQLHLESFFELKDAQHEVYEWARELKVSTEMDADHLFKVWSPGITEEMVRLAQQNWGRTRFYLPDLLADAAQYVQAEEGYKERLSRTKAARRGIEDQESQQWRQELLVEASAACDLGVVLAQQGKYEDADALFVRVLRDLGATVGTEHPNYASVLNSRAGLL 362
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 365 bits (936), Expect = 2.280e-109 Identity = 201/381 (52.76%), Postives = 266/381 (69.82%), Query Frame = 1
Query: 1078 LNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVE-DARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVLR 2217
++I +L ++E +L+A P+ DAK+N+LK LQV+TV +++LAYD+LY ELN G ECLR + + ++QPKVL+ Q CD +LENQL+FY DA AK HLD+L+ +VA +VKS EST+RKA+ CGGDVRKV DMAR +VICATPE L+ AY +M + E + ++RV+NGFN+ WMPSGYRDVKLN VVN HLCEIQLHL+ F+ LK GQH VYEWAR+L VTTE+ LFKN+SPE+ +M+RLA ++W TGFCLP+L A G+Y +AEE R+ LG E DA R E+ S + RQ +L A + LAL L +QGK+AEA+ LY R E+ EK L R+HP++A ++NNR E+LR
Sbjct: 3 VDIEELLRLENELKASCERETSPATP-DAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLRSIAPA-RSTGIVQPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMGLPEAN-VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKESRQALLRVNAARARLALVLEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELLR 380
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE) HSP 1 Score: 346 bits (888), Expect = 5.070e-100 Identity = 198/378 (52.38%), Postives = 247/378 (65.34%), Query Frame = 1
Query: 1078 LNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGC-DVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTE 2208
++I L +E +L+ S P + RDAKVNLLK+LQ++TV ++E AYDNLY EL G ECLR + K D QPKVLE GC D D +L NQLEFY A AK LD+++ +AD H EVKSREST+RK +F GGDVRKV DMAR SVIC TPEDL+ Y +M + D+ RV NGFN WMP GYRDVK+N VVN HLCEIQLHL F LK+ QH VYEWARDLKVT+++ A LF LS E+T++MIRLA + W TG+CLPELL A G+Y QAEE R++L E+ ++G+E+ S + R+ +L A SNL L +QGKY E L R E+ E +L +HP+ AI LNNR E
Sbjct: 3 VDIKDLIGLEAELKKSCDSATPPVV-RDAKVNLLKYLQIQTVLQFEAAYDNLYYELGKEGGLECLRDIAPFRSK-DFSQPKVLELHGCGDEDVRLANQLEFYLAGAELAKRRLDEIITNLADDWGRYEVQHVEVKSRESTQRKVRRFYGGDVRKVADMARVSVICLTPEDLQHVYSDIMGSL---DVRRVTNGFNNDWMPGGYRDVKMNPVVNEHLCEIQLHLGDFSVLKSDQHAVYEWARDLKVTSKMRATDLFSTLSREVTEEMIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSRRALLGVNTARSNLGAVLREQGKYVEVGRLCLRDVEMGEDTLGPDHPDFAIRLNNRAE 375
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 346 bits (888), Expect = 2.810e-98 Identity = 193/380 (50.79%), Postives = 253/380 (66.58%), Query Frame = 1
Query: 1078 LNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVLR 2217
++IN L ++E +L+ S DAKVNLLK+LQV+TV +++ AYD+LY EL+ G +CLR + + P + + QPKV + Q C DE+LENQL+FY DA AK HLD+LV VA +VKSREST+RKA++FC GDVRKV D+AR +VIC TPE L+ AY +ME+ ++ ++NGF + WMPSGYRDVKLN VVN HLCEIQLHL+ F+ LK GQH VYEWARDL VTT++ LF+ LS ++T +M+ LA E+W GTG+ LP+L A G+Y AE+ QR+ L E+ R +E+ S + R + E EA S LA L++QGKY EAETL R+ I EK +HP VAI LNNR LR
Sbjct: 4 VDINDLLRLEAELKTSR-ERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLRTIAPV-PSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIMEL-PTQQVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRAGFLR 380
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE) HSP 1 Score: 360 bits (925), Expect = 3.030e-97 Identity = 203/380 (53.42%), Postives = 260/380 (68.42%), Query Frame = 1
Query: 1078 LNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVLR 2217
++I +LR++E +LE + + P +RDAK+NLLKFLQ++ V ++E AYD+LY ELN H G +CLR + PK DLLQPKVLE Q C D + QLEFY DA AK LD+LV ++A GC EVKSR ST+RKA K GDVRKV DMAR SVIC TPE L+ AY ++E + D++RV NGFN+ WMPSGYRDVK+N VVN H+CEIQLHL+ F+ LK+ QH VYEWARDLKVTT + A +LF LS +IT++MIRLA+ +WHGTG LP L G+Y QAE+ R++L ED RRG+E+ +T+ R+ L A+A L L GKYAEAE LY + Q I EK L HP++A TL+N ++LR
Sbjct: 1430 IDIAELRRLEAELENSCETCQNP-YDRDAKLNLLKFLQIKAVLQFERAYDHLYYELNKHGGLKCLREITPARPK-DLLQPKVLELQDCHEDVRFAAQLEFYLADAKLAKNRLDELVVDIAKDTGGCQVHCAEVKSRASTQRKARKSYDGDVRKVTDMARVSVICDTPEALKRAYLAIVESFQG-DVLRVANGFNSDWMPSGYRDVKVNPVVNEHICEIQLHLREFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGYRQKLSEAEDNRRGVEDNGNTESREASLRSAKAGLGCVLGLK--GKYAEAEALYAQCQAIEEKVLGPEHPSLATTLHNLADLLR 1804
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: D7FGT0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT0_ECTSI) HSP 1 Score: 347 bits (890), Expect = 9.540e-97 Identity = 196/393 (49.87%), Postives = 257/393 (65.39%), Query Frame = 1
Query: 1078 LNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQ-------------QGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVLR 2217
++I +LR++E +LE + P +RDAK+NLLKFLQ++ V ++E AYD LY ELN G +CLR + PK DLLQPKVLE Q C D + QL+FY DA AK HLD+LV ++ G GC EVKSR ST+RKA K G DVRKV DMAR SVIC TPE + AY ++E + D++RV NGFN+ WMPSGYRDVK+N VVN HLCEIQLHL F+ LK+ QH VYEWARDLKVTT + A +LF LS +IT++MIRLA+ +WHGTG LP L G+Y QAE+ R+ L ED +RG+E++ + + R+ L A+A+ L L +GKY EA L++R+ IFEK+L +HP+VA +L + +L+
Sbjct: 3 IDIAELRRLEAELENSCEECQNP-YDRDAKLNLLKFLQIKAVLQFERAYDQLYYELNKDGGLKCLREITPARPK-DLLQPKVLELQDCHEDVRFAAQLDFYLADAKLAKNHLDELVADITKGTGGCQVQCAEVKSRASTQRKARKSYGADVRKVADMARVSVICDTPETFKRAYLAIVESFQG-DVLRVANGFNSDWMPSGYRDVKVNPVVNEHLCEIQLHLHDFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGFRQELSEAEDNKRGVEDKDNKESRKKSLRSAKASLGCVLGLKSPGLEHGISRGHHGEGKYEEARALHQRSHSIFEKALGPDHPDVATSLTSLAGLLQ 392
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Match: A0A6H5JLM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM9_9PHAE) HSP 1 Score: 342 bits (878), Expect = 1.630e-95 Identity = 195/384 (50.78%), Postives = 248/384 (64.58%), Query Frame = 1
Query: 1075 GLNINKLRQMEKDLEADT----ISMRGPSLERDAKVNLLKFLQVRTVEEYELAYDNLYDELNMHPGRECLRRVQDLDPKSDLLQPKVLEAQGCDVDEKLENQLEFYRQDATCAKVHLDKLVREVADGHQGCNGVHPEVKSRESTKRKATKFCGGDVRKVIDMARASVICATPEDLELAYKRLMEIIEPHDMMRVRNGFNTGWMPSGYRDVKLNAVVNGHLCEIQLHLQSFYELKAGQHNVYEWARDLKVTTEIDANHLFKNLSPEITDDMIRLAEEDWHGTGFCLPELLAAGGKYPQAEELQRKRLGMVEDARRGIEEQQSTQWRQLMLAEAEAASNLALWLNQQGKYAEAETLYERTQEIFEKSLERNHPNVAITLNNRTEVL 2214
G +I L Q+E DL+ D I+M SLER AK+NLLKFLQV TV +E YD L E N G EC+R + K D+LQP+ ++ Q C++ EKL FY A AK LD+LV+ V G +GC +VKS EST+RK F GDVRKV DMAR SV+C PEDL+ AY + ++P D+ RV NGF + WMPSGYRDVKLNAVVNGHLCEIQLHL+ FY LK QH VYEWARDL VT + A+ LF+NLS E+TD+MIRLAE +WH TGF LP L A G+Y AE+ RK L E A RG+++ + +W+ + + +A ++L L +QGKY EAETLY R EK+L HP +A+ +N++ VL
Sbjct: 46 GFSIEDLLQVEADLKHDAPGSGIAM---SLERRAKINLLKFLQVETVLHFERQYDQLCYERNKDGGLECVRGIPPARMK-DMLQPQKMKRQKCELAEKLH----FYLAAAKVAKRCLDELVQNVVGGLEGCEVQFADVKSLESTERKTVNFYSGDVRKVADMARLSVVCQEPEDLKQAYVSITRTLKPRDIFRVTNGFISDWMPSGYRDVKLNAVVNGHLCEIQLHLREFYNLKRHQHVVYEWARDLNVTKAMVADQLFENLSGEVTDEMIRLAESNWHETGFLLPRLQLAAGRYAHAEDGHRKALSEAERAVRGLKDNATMEWKWVFRQQIQATADLGDCLERQGKYDEAETLYTRAIIDGEKTLGAGHPEIAVWMNDKAIVL 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig646.1.42 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig646.1.42 >prot_P-littoralis_Contig646.1.42 ID=prot_P-littoralis_Contig646.1.42|Name=mRNA_P-littoralis_Contig646.1.42|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1140bp MGDGLNINKLRQMEKDLEADTISMRGPSLERDAKVNLLKFLQVRTVEEYEback to top mRNA from alignment at P-littoralis_Contig646:1300..27712- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig646.1.42 ID=mRNA_P-littoralis_Contig646.1.42|Name=mRNA_P-littoralis_Contig646.1.42|organism=Pylaiella littoralis U1_48|type=mRNA|length=26413bp|location=Sequence derived from alignment at P-littoralis_Contig646:1300..27712- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig646:1300..27712- >mRNA_P-littoralis_Contig646.1.42 ID=mRNA_P-littoralis_Contig646.1.42|Name=mRNA_P-littoralis_Contig646.1.42|organism=Pylaiella littoralis U1_48|type=CDS|length=3420bp|location=Sequence derived from alignment at P-littoralis_Contig646:1300..27712- (Pylaiella littoralis U1_48)back to top |