prot_P-littoralis_Contig645.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig645.2.1
Unique Nameprot_P-littoralis_Contig645.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length69
Homology
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BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 4.840e-7
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0 
Query:    1 QGKYAEVEPLIERCQTIDEKILGPEHPWLVTILLNRAKLLIAK 43
            QGKY E EPL ER Q I EK+LG EHP + + L NR +LL A+
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
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BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 2.610e-6
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0 
Query:    1 QGKYAEVEPLIERCQTIDEKILGPEHPWLVTILLNRAKLLI 41
            QGKYAE EPL E+ Q I EK+LGPEHP + T+L  R   LI
Sbjct: 1279 QGKYAEPEPLYEQSQAITEKVLGPEHPDVATVLKKRCCWLI 1319
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BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Match: D7FWM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM6_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.170e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 QGKYAEVEPLIERCQTIDEKILGPEHPWLVTILLNR 36
            QGKY E EPL +R Q   EK+LGPEHP + T+L N+
Sbjct:   45 QGKYEEAEPLYDRSQATPEKVLGPEHPDVATVLKNK 80
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BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 1.700e-5
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    1 QGKYAEVEPLIERCQTIDEKILGPEHPWLVTIL 33
            QGKYAE E L  RCQ I+EK+LGPEHP L + L
Sbjct:  339 QGKYAEAEALYVRCQAIEEKVLGPEHPSLASTL 371
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BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 1.710e-5
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    1 QGKYAEVEPLIERCQTIDEKILGPEHPWLVTILLNRAKLL 40
            Q KY E EPL ER Q + EK+LGPEHP +   L NRA LL
Sbjct:  651 QRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig645.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K3K8_9PHAE4.840e-758.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIH9_9PHAE2.610e-660.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWM6_ECTSI1.170e-558.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXH0_ECTSI1.700e-566.67Tetratricopeptide repeat containing protein n=1 Ta... [more]
D8LGG5_ECTSI1.710e-560.00NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..69
e-value: 2.1E-20
score: 74.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..61
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..61
e-value: 8.8E-12
score: 45.2
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 1..69
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig645contigP-littoralis_Contig645:20568..21511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig645.2.1mRNA_P-littoralis_Contig645.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig645 20568..21511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig645.2.1 ID=prot_P-littoralis_Contig645.2.1|Name=mRNA_P-littoralis_Contig645.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=69bp
QGKYAEVEPLIERCQTIDEKILGPEHPWLVTILLNRAKLLIAKGKYAEAE
PLYERCQAIQERALGPDHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf