prot_P-littoralis_Contig644.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig644.38.1
Unique Nameprot_P-littoralis_Contig644.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length173
Homology
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 5.430e-74
Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 0
Query:    4 PEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 173
            P+   W AAA++E+ SL E +VYKLVPR+ VPPG+K I SKWV KRKA  S+K R+VAQGWNQV GLDCGNT+APVCR QS+RM+  IAV+ + E+ Q+DV TAFLYADI E VFV QPPG+E KDKDGG LVM+L+KSLYGLAQSP NWF TIDP L  IGFVPLKSDT
Sbjct:  469 PDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDT 638          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.070e-73
Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 0
Query:    3 TPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 172
            +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct: 1160 SPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1329          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.080e-73
Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 0
Query:    3 TPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 172
            +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct: 1325 SPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1494          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 9.870e-73
Identity = 120/170 (70.59%), Postives = 138/170 (81.18%), Query Frame = 0
Query:    3 TPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 172
            +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLY DI EEVFV QPPG+E KDKDGG +VM+L +SLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct:  941 SPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYTDIHEEVFVEQPPGFEVKDKDGGDMVMKLNRSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1110          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.060e-72
Identity = 115/170 (67.65%), Postives = 137/170 (80.59%), Query Frame = 0
Query:    4 PEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 173
            P+   W  AA++E+ SL E +V+KLVPR+ VPPG+K I SKWV KRKAD S+K R+V QGWNQV GLD G+TFAPVCRLQS+RM+   AV+ + E+ Q+DV TAFLYADI E VFV QPPG+E K+KDGG LVM+L+KSLYGLAQSP NWF TIDP+L  IGFVPLKSDT
Sbjct:   60 PDGEQWNTAAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDT 229          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 4.740e-72
Identity = 117/158 (74.05%), Postives = 130/158 (82.28%), Query Frame = 0
Query:   15 KEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 172
            +EM SL   KVYKLVPRS VPPG+K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct:  151 REMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 308          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 5.570e-70
Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 0
Query:    4 PEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 173
            P+   W AAA++E+ SL E +VYKLVPR+ VPPG+K I SKWV KRKAD S+K R+VAQGWNQV GLDCG+T+APVCRLQS+RM+  I V+ + E+ Q+DV TAF YADI E VFV +PPG+E KDKDGG LVM+L+KSLYGLAQ   NWF TIDP L     VP KSDT
Sbjct:   60 PDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDT 229          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 3.430e-69
Identity = 117/173 (67.63%), Postives = 135/173 (78.03%), Query Frame = 0
Query:    1 MKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 173
            M+ PE  LW+AA DKE+ SL +LKVYKLVPR+ VP G  +I SKWV K K +N++KAR+VA+GWNQV G DCG TFAPVCRLQS+RMV AIA E D +VIQLDVKTAFLYADIEE VFV   PGYE K+ +   LVM+LEKSL GLAQSP +W +TID  L  IGF PLKSDT
Sbjct:  309 MELPETKLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDT 481          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 2.980e-67
Identity = 112/170 (65.88%), Postives = 135/170 (79.41%), Query Frame = 0
Query:    4 PEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 173
            P+ + W  AA++E+ SL E +VYKLVP + VPPG+K   SKWV KRKAD S+K R+VAQGWNQV GL CG+T+APVCRLQS+RM+  IAV+ + E+ Q+DV TAFLY DI E VFV QPPG+E K+KDGG LVM+L++SLYGLAQSP NWF TIDP L  IGFV LKSDT
Sbjct:  645 PDGAQWNTAAEREIASLKERQVYKLVPPTAVPPGRKRTTSKWVFKRKADGSFKGRLVAQGWNQVPGLGCGSTYAPVCRLQSIRMLACIAVQFNLELDQIDVFTAFLYVDILENVFVEQPPGFEVKNKDGGDLVMQLQESLYGLAQSPSNWFHTIDPFLVEIGFVSLKSDT 814          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 2.420e-66
Identity = 110/169 (65.09%), Postives = 134/169 (79.29%), Query Frame = 0
Query:    4 PEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 172
            P+   W AAA++E+ SL E +V+KLVPR+ VPPG+K I S+WV KRK D S+K R+VAQGWNQV GLDCG+T+APVCRLQS+RM+  IAV+ + E+ Q+DV TAFLYADI E VFV QPPG+E KDKDGG LVM+L+KSLYGLAQSP NWF TIDP L  I ++ L  D
Sbjct:  846 PDGEQWNAAAEREIASLKERQVFKLVPRTAVPPGRKRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIVYLTLYVD 1014          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL37_9PHAE5.430e-7470.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE1.070e-7371.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.080e-7371.76Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE9.870e-7370.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWT4_9PHAE1.060e-7267.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE4.740e-7274.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPN4_9PHAE5.570e-7065.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6R7_9PHAE3.430e-6967.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K129_9PHAE2.980e-6765.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIN1_9PHAE2.420e-6665.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 25..168
e-value: 6.9E-42
score: 143.7
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig644contigP-littoralis_Contig644:137168..137686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig644.38.1mRNA_P-littoralis_Contig644.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig644 137168..138556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig644.38.1 ID=prot_P-littoralis_Contig644.38.1|Name=mRNA_P-littoralis_Contig644.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=173bp
MKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRK
ADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVI
QLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSP
GNWFRTIDPVLKTIGFVPLKSDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2