mRNA_P-littoralis_Contig644.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig644.38.1
Unique NamemRNA_P-littoralis_Contig644.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 1.030e-74
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 2
Query:  563 VQPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 1114
            VQP +P+   +A  +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct: 1146 VQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1329          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 1.040e-74
Identity = 127/184 (69.02%), Postives = 148/184 (80.43%), Query Frame = 2
Query:  563 VQPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 1114
            VQP +P+   +A  +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct: 1311 VQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1494          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.720e-74
Identity = 123/184 (66.85%), Postives = 145/184 (78.80%), Query Frame = 2
Query:  566 QPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 1117
            QP +P+   +A   P+   W AAA++E+ SL E +VYKLVPR+ VPPG+K I SKWV KRKA  S+K R+VAQGWNQV GLDCGNT+APVCR QS+RM+  IAV+ + E+ Q+DV TAFLYADI E VFV QPPG+E KDKDGG LVM+L+KSLYGLAQSP NWF TIDP L  IGFVPLKSDT
Sbjct:  455 QPDVPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDT 638          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 6.750e-74
Identity = 125/184 (67.93%), Postives = 146/184 (79.35%), Query Frame = 2
Query:  563 VQPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 1114
            VQP +P+   +A  +P+A+ W AAA++EM SL + KVYKLVPRS VPP +K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLY DI EEVFV QPPG+E KDKDGG +VM+L +SLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct:  927 VQPDVPRTIQEARASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYTDIHEEVFVEQPPGFEVKDKDGGDMVMKLNRSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 1110          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 3.500e-73
Identity = 119/184 (64.67%), Postives = 144/184 (78.26%), Query Frame = 2
Query:  566 QPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 1117
            QP +P+   +A   P+   W  AA++E+ SL E +V+KLVPR+ VPPG+K I SKWV KRKAD S+K R+V QGWNQV GLD G+TFAPVCRLQS+RM+   AV+ + E+ Q+DV TAFLYADI E VFV QPPG+E K+KDGG LVM+L+KSLYGLAQSP NWF TIDP+L  IGFVPLKSDT
Sbjct:   46 QPDVPQTIEEARAMPDGEQWNTAAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDT 229          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.360e-70
Identity = 115/184 (62.50%), Postives = 138/184 (75.00%), Query Frame = 2
Query:  566 QPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 1117
            QP  P+   +A   P+   W AAA++E+ SL E +VYKLVPR+ VPPG+K I SKWV KRKAD S+K R+VAQGWNQV GLDCG+T+APVCRLQS+RM+  I V+ + E+ Q+DV TAF YADI E VFV +PPG+E KDKDGG LVM+L+KSLYGLAQ   NWF TIDP L     VP KSDT
Sbjct:   46 QPDAPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDT 229          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 5.410e-69
Identity = 117/158 (74.05%), Postives = 130/158 (82.28%), Query Frame = 2
Query:  641 KEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 1114
            +EM SL   KVYKLVPRS VPPG+K I SKWV KRKAD ++K RVVAQGWNQV GLDCG+T+APVCR+QSVRMV  I VE +    Q+DV TAFLYADI+EEVFV QPPG+E KDKDGG +VM+L KSLYGLAQSPGNWF TIDPVL  IGFV LKSD
Sbjct:  151 REMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSD 308          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 7.130e-68
Identity = 120/181 (66.30%), Postives = 138/181 (76.24%), Query Frame = 2
Query:  575 IPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 1117
            IP     AM+ PE  LW+AA DKE+ SL +LKVYKLVPR+ VP G  +I SKWV K K +N++KAR+VA+GWNQV G DCG TFAPVCRLQS+RMV AIA E D +VIQLDVKTAFLYADIEE VFV   PGYE K+ +   LVM+LEKSL GLAQSP +W +TID  L  IGF PLKSDT
Sbjct:  301 IPNTCKKAMELPETKLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDT 481          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.150e-66
Identity = 114/183 (62.30%), Postives = 141/183 (77.05%), Query Frame = 2
Query:  566 QPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSD 1114
            QP +P+   +A   P+   W AAA++E+ SL E +V+KLVPR+ VPPG+K I S+WV KRK D S+K R+VAQGWNQV GLDCG+T+APVCRLQS+RM+  IAV+ + E+ Q+DV TAFLYADI E VFV QPPG+E KDKDGG LVM+L+KSLYGLAQSP NWF TIDP L  I ++ L  D
Sbjct:  832 QPDVPRTIEEARAMPDGEQWNAAAEREIASLKERQVFKLVPRTAVPPGRKRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIVYLTLYVD 1014          
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Match: A0A6H5JWX0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX0_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 5.040e-66
Identity = 111/203 (54.68%), Postives = 138/203 (67.98%), Query Frame = 2
Query:  566 QPGIPKLFYDAMKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRKADNSYKA-------------------RVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVIQLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSPGNWFRTIDPVLKTIGFVPLKSDT 1117
            QP +P+   +A   P+ + W  AA++E+ +L E +VYKLVPR+ VPPG++ I SKW+ KRKAD  +K                     +   GWNQV  LDCG+T+APVCRLQS+RM+  IAV+ + E+ Q+DV TA LYADI E VFV QPPG+E KDKDGG LVM+L+KSLYGLAQSP NWF TIDP L  I FV LKSDT
Sbjct:   46 QPDLPRTIQEARAMPDGAQWNTAAEREIANLKERQVYKLVPRTAVPPGRRRIKSKWMFKRKADGPFKGGFRWRKAGTKCLNWTAAAPTLRCAGWNQVPELDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTASLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEISFVLLKSDT 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig644.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJH6_9PHAE1.030e-7469.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.040e-7469.02Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KL37_9PHAE1.720e-7466.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYB5_9PHAE6.750e-7467.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWT4_9PHAE3.500e-7364.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPN4_9PHAE4.360e-7062.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE5.410e-6974.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6R7_9PHAE7.130e-6866.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN1_9PHAE1.150e-6662.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWX0_9PHAE5.040e-6654.68Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig644contigP-littoralis_Contig644:137168..138556 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4565.Traes_4DL_A8C4D7877.1
PFAMsRVT_2
Model size1117
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.28e-37
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37THH@33090|Viridiplantae,3GG2K@35493|Streptophyta,3M96M@4447|Liliopsida,3INI6@38820|Poales
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size519
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791344.9232018-CDS-P-littoralis_Contig644:137167..1376861680791344.9232018-CDS-P-littoralis_Contig644:137167..137686Pylaiella littoralis U1_48CDSP-littoralis_Contig644 137168..137686 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791344.9339638-UTR-P-littoralis_Contig644:137686..1382151680791344.9339638-UTR-P-littoralis_Contig644:137686..138215Pylaiella littoralis U1_48UTRP-littoralis_Contig644 137687..138215 -
1680791344.9543602-UTR-P-littoralis_Contig644:138487..1385561680791344.9543602-UTR-P-littoralis_Contig644:138487..138556Pylaiella littoralis U1_48UTRP-littoralis_Contig644 138488..138556 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig644.38.1prot_P-littoralis_Contig644.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig644 137168..137686 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig644.38.1

>prot_P-littoralis_Contig644.38.1 ID=prot_P-littoralis_Contig644.38.1|Name=mRNA_P-littoralis_Contig644.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=173bp
MKTPEASLWRAAADKEMDSLHELKVYKLVPRSTVPPGQKIINSKWVLKRK
ADNSYKARVVAQGWNQVHGLDCGNTFAPVCRLQSVRMVLAIAVEMDWEVI
QLDVKTAFLYADIEEEVFVAQPPGYETKDKDGGPLVMRLEKSLYGLAQSP
GNWFRTIDPVLKTIGFVPLKSDT
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mRNA from alignment at P-littoralis_Contig644:137168..138556-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig644.38.1 ID=mRNA_P-littoralis_Contig644.38.1|Name=mRNA_P-littoralis_Contig644.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1389bp|location=Sequence derived from alignment at P-littoralis_Contig644:137168..138556- (Pylaiella littoralis U1_48)
AGCACCGGACTTCTACGGGGAGTGAGGATGGGGGCGGGGCAACGACGGGT TCATCGGGCAGGGGCTGGGGTGAGCAATTTGTTCAGGTTCGGAAATGTTT CTTTATGATCAAGCGTAGAACTACATCGTCCGCCTGTGCCTCTATGCAGT TGGTTCATACACAGTGGCTCAAGGATAGGACCCGATCTCGACTGTATTGA AAGTGACATCTTTTGGGAGGAAAGGTCTGCAATTGCTGGCACGAATCATA CCAACCAGCCGCACTTGCTTGACGGCGGCCGCCGTATCAAGTCATAAATA CCTTTGACAAACTGCTGTAATTTTCTGTGTTTGTACAGCAGATCACACCC CTTTTGAGGAAAAGAGCTGGTGTACCGCGGCAAATATGGGGACAAGAACA CTTGTGTGCGCATGGCCCTCGAGTCGTATGCTGGCATGAGGAGGGCGGGT ATCGGCACTGGCCCACGTACAGAATCGATGGGACGACGATAGTTAACAGT ACAAACTACGTCCGACGCGAATCATGTACTTCACGGGGCCGGTTGTCAAA GGTGCACGTGAAAGATACAGAGTGCCATTCCAAACGTCGCTTGCACTAAA CTGAGACTGAGAGATCCAGACCCGTACACGTCGTACACTCTTTAGCCCAG GGGATGACCGCTACACAAACAGTTATGCTTCGTTTGTGTATGCAGTAGAA TATGTTGTAGTCAACCTTGTGACAAATGTTCGCCATGAATATCATACGCC AGTGAGACTCAGGCTATTTTTTGGCTTATTTTGAGCGCGAGCGCCGCTAC TTCTCCTGCTGCAACTCAACAGCAAAATTATTCAGTGCAGCCGGGAATCC CTAAATTGTTCTACGATGCCATGAAAACGCCGGAAGCTTCACTTTGGCGC GCTGCTGCGGACAAGGAGATGGACAGTCTGCATGAACTCAAGGTCTACAA GCTCGTTCCGCGCTCTACTGTTCCTCCGGGACAGAAGATCATCAACTCAA AGTGGGTTCTGAAGCGTAAGGCCGATAATTCCTACAAGGCGCGGGTGGTC GCGCAAGGCTGGAATCAAGTACATGGGCTAGACTGCGGCAACACGTTCGC TCCGGTTTGCAGGCTGCAGAGTGTTCGGATGGTGCTTGCTATAGCTGTGG AAATGGACTGGGAAGTCATTCAGCTTGATGTCAAGACAGCTTTCCTGTAT GCGGACATTGAAGAGGAAGTGTTCGTCGCGCAACCGCCTGGATATGAGAC CAAGGACAAGGATGGAGGACCTCTAGTCATGAGGCTGGAGAAAAGCCTCT ACGGGCTAGCACAAAGCCCCGGGAACTGGTTCCGCACCATTGACCCCGTC CTCAAGACCATCGGCTTCGTCCCGCTGAAATCTGACACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig644:137168..138556-

>mRNA_P-littoralis_Contig644.38.1 ID=mRNA_P-littoralis_Contig644.38.1|Name=mRNA_P-littoralis_Contig644.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=519bp|location=Sequence derived from alignment at P-littoralis_Contig644:137168..138556- (Pylaiella littoralis U1_48)
ATGAAAACGCCGGAAGCTTCACTTTGGCGCGCTGCTGCGGACAAGGAGAT
GGACAGTCTGCATGAACTCAAGGTCTACAAGCTCGTTCCGCGCTCTACTG
TTCCTCCGGGACAGAAGATCATCAACTCAAAGTGGGTTCTGAAGCGTAAG
GCCGATAATTCCTACAAGGCGCGGGTGGTCGCGCAAGGCTGGAATCAAGT
ACATGGGCTAGACTGCGGCAACACGTTCGCTCCGGTTTGCAGGCTGCAGA
GTGTTCGGATGGTGCTTGCTATAGCTGTGGAAATGGACTGGGAAGTCATT
CAGCTTGATGTCAAGACAGCTTTCCTGTATGCGGACATTGAAGAGGAAGT
GTTCGTCGCGCAACCGCCTGGATATGAGACCAAGGACAAGGATGGAGGAC
CTCTAGTCATGAGGCTGGAGAAAAGCCTCTACGGGCTAGCACAAAGCCCC
GGGAACTGGTTCCGCACCATTGACCCCGTCCTCAAGACCATCGGCTTCGT
CCCGCTGAAATCTGACACG
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