mRNA_P-littoralis_Contig644.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.310e-54 Identity = 93/164 (56.71%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NRAAGT+ TKCVEVTK+ +K K+++ V PAIK +WP R RTIYIQ DN HR+N D++ A + G+DI+LINQP NSP TNILDLGFF ++QSLQDR RT+D+ I+EV+ A+ P+ KVW SLQA + QI+L G NT+KLPHL KD A +G
Sbjct: 109 NRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGG-RGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKKDNAANSG 270
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 165 bits (417), Expect = 6.540e-47 Identity = 85/165 (51.52%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 1 NRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR GT+V + VE V ++ YKA LI +IPAIK KWP + + RTIYIQQDNAKPH D D++ A SGG+DI++ QPPNSP N+LDLG+F SIQSLQ +T R ++ L+ V A++A L K++ +LQ CME I G N YK PH GKD +TG
Sbjct: 148 NRPKGTIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDTVNSAFSAMKADTLSKIFMTLQTCMECITRANGGNNYKTPHRGKDALKKTG 312
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: A0A1R3KIH7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KIH7_9ROSI) HSP 1 Score: 165 bits (417), Expect = 3.990e-46 Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR AGT+ TK + VTKD +A +IE ++PAIK KWP + T+YIQQDNAKPH + L+A SS GFDIQ+ QPPNSP N+LDLGFF +IQSLQ + RTID+LI+ VE ++ L V+ +LQ CM +++ GG N YK+PH+GKDK G
Sbjct: 255 NRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWP--DKMETVYIQQDNAKPHINPKDVEFLKAASSDGFDIQISCQPPNSPDLNVLDLGFFRAIQSLQHQEAPRTIDELINAVEKSFNEFPENSLNNVFLTLQNCMIEVMKVGGGNNYKVPHMGKDKLQNQG 416
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: UPI0019D5FBC2 (uncharacterized protein LOC120697786 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5FBC2) HSP 1 Score: 160 bits (404), Expect = 9.690e-46 Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
+R GT++TK + V +DT ++ LI V+ AIK WPA RTI+IQQDNA+ H D ED A + GFDI+LINQPPNSP N+LDLGFFAS+QS D T +R +D+LI+ VE + D L V+ +LQ C+ +++ GGEN YK+PH+ K++ G
Sbjct: 98 SRPRGTLITKTITVDRDTMRSYLIGKVLWAIKTHWPAEDAGRTIWIQQDNARTHVPVDDEDFARAAAQTGFDIRLINQPPNSPDMNVLDLGFFASLQSKTDTTTSRNLDELIANVENEFRNYDVNDLRNVFLTLQGCLIEVMKAGGENKYKIPHMNKERLEALG 261
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.320e-45 Identity = 82/164 (50.00%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR +GT+VT V V++DTY+ L+ VIPAIK KWP A R I IQQDNA+PH + +L AC + G+DI + QPPNSP N+LDLGFF +IQSLQ+RTR RTID+LI+ AW + D + L + +LQ+CM + + GG N YK+PH+ K + G
Sbjct: 242 NRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQG 404
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.380e-45 Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR AGT+ T+ V VT+ YKA LI+ VIP IK KWP++ R + IQQDNA+PH +++AC SGG++++++ QPPNSP NILDLGFF +IQSLQ++ +R ID +I+ + AW+ + L + +LQ CM++I+ G+N YK+PH+GK K A G
Sbjct: 257 NRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAG-RNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARG 419
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 161 bits (408), Expect = 1.080e-44 Identity = 83/165 (50.30%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 NRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR GT+V + VE V ++ YKA I +IPAIK KWP + + RTIYIQQDNAKPH D D++ A SGG+DI++ QPPNSP N+LDLG+F SIQSLQ +T R ++ L+ V A++A L K++ +LQ CME I+ G N YK PH GKD + G
Sbjct: 244 NRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAG 408
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: W4HAZ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAZ6_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.820e-44 Identity = 76/164 (46.34%), Postives = 106/164 (64.63%), Query Frame = 1
Query: 1 NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR AGT+ TK V VT+D Y+A LI+ VIPAIK KWP R I IQQDNA+PH +++AC+S G+ ++L QPPNSP N+LDLGFF +IQSLQ++ +R +D +++ + AW +P L + +LQ CM +++ G N YK+PH+ K A G
Sbjct: 41 NRPAGTLETKPVSVTRDMYRAMLIDHVIPAIKAKWPVGESRRII-IQQDNARPHVPPLDSRIVDACTSDGWMMELKYQPPNSPDLNVLDLGFFRAIQSLQEKNYSRNVDDIVAASDEAWKQVEPMTLNANFLTLQCCMHEVIRVAGNNNYKIPHMKKASLALKG 203
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: A0A834FTG5_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FTG5_RHOSS) HSP 1 Score: 159 bits (402), Expect = 5.140e-44 Identity = 79/164 (48.17%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 1 NRAAGTVVTKCV-EVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTART 489
NR AGT+ TK + VTKD ++ LI V+PAI+ KWP ++ H TI+IQQDNAKPH +EA + GFDI+L NQPP+SP N+LDLG+F +IQSLQ + +TID+L++ VE ++ L +V+ SLQACM +++ N YKLPH+GK++ R+
Sbjct: 225 NRPAGTLETKAILSVTKDIIRSCLINQVLPAIQSKWPPSSAHETIFIQQDNAKPHIQPFDLQFVEAATKDGFDIRLSNQPPSSPDMNVLDLGYFRAIQSLQHQEAPKTIDELVNAVEKSFEELSVDSLNRVFVSLQACMVEVMKVHEGNNYKLPHIGKNQLIRS 388
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 157 bits (398), Expect = 5.340e-44 Identity = 83/165 (50.30%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 1 NRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPHRVNDHEDLLEACSSGGFDIQLINQPPNSPGTNILDLGFFASIQSLQDRTRARTIDQLISEVEVAWAAADPAKLGKVWTSLQACMEQILLCGGENTYKLPHLGKDKTARTG 492
NR AGT+VTK E +TK+ K+ LIE VIPAI KWP R TI IQQDNAKPH ++ + ++A S GFDI+LI QPPNSP N+LDLGFF SIQ LQ TI++L++ V+ ++ KL +V+ + Q CM++I+ G+N YK+PH+GKD+ R G
Sbjct: 175 NRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMR--TIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREG 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig644.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig644.7.1 >prot_P-littoralis_Contig644.7.1 ID=prot_P-littoralis_Contig644.7.1|Name=mRNA_P-littoralis_Contig644.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp NRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNback to top mRNA from alignment at P-littoralis_Contig644:24980..25471+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig644.7.1 ID=mRNA_P-littoralis_Contig644.7.1|Name=mRNA_P-littoralis_Contig644.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig644:24980..25471+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig644:24980..25471+ >mRNA_P-littoralis_Contig644.7.1 ID=mRNA_P-littoralis_Contig644.7.1|Name=mRNA_P-littoralis_Contig644.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig644:24980..25471+ (Pylaiella littoralis U1_48)back to top |