prot_P-littoralis_Contig644.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig644.2.1
Unique Nameprot_P-littoralis_Contig644.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length119
Homology
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BLAST of mRNA_P-littoralis_Contig644.2.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 3.440e-11
Identity = 44/74 (59.46%), Postives = 49/74 (66.22%), Query Frame = 0 
Query:   10 EVENDAGMDQEAKKTDDGGHGSAEAANGGEEEATGAKSSTPEVVDMTFSDIVHDVASREEQSGVTVPFYFICLL 83
            EVEN    D E+K   DGG       + GEEEA       PEVVDMTFS+IV DVAS+EEQ+GVTV FYFICLL
Sbjct:  745 EVEN---KDVESKSPADGG-------DKGEEEAEDVVKPAPEVVDMTFSNIVCDVASKEEQTGVTVSFYFICLL 808
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BLAST of mRNA_P-littoralis_Contig644.2.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 7.200e-11
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 
Query:   10 EVENDAGMDQEAKKTDDGGHGSAEAANGGEEEATGAKSSTPEVVDMTFSDIVHDVASREEQSGVTVPFYFICLL 83
            EVEN    D E+K   DGG       + G+EEA       P VVDMTFS+IV DVAS+EEQ+GVTVPFYFICLL
Sbjct:  276 EVEN---KDVESKSPADGG-------DKGKEEAEDVVKPAPGVVDMTFSNIVCDVASKEEQTGVTVPFYFICLL 339
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig644.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD70_ECTSI3.440e-1159.46Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K552_9PHAE7.200e-1158.11Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig644contigP-littoralis_Contig644:36490..51805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig644.2.1mRNA_P-littoralis_Contig644.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig644 35907..74906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig644.2.1 ID=prot_P-littoralis_Contig644.2.1|Name=mRNA_P-littoralis_Contig644.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp
MKVDGGDDLEVENDAGMDQEAKKTDDGGHGSAEAANGGEEEATGAKSSTP
EVVDMTFSDIVHDVASREEQSGVTVPFYFICLLPPPPLLRAHLSYHATPP
CAHAAEKRGGTSHVKCTT*
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