mRNA_P-littoralis_Contig643.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig643.23.1
Unique NamemRNA_P-littoralis_Contig643.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 7.800e-115
Identity = 192/274 (70.07%), Postives = 225/274 (82.12%), Query Frame = 3
Query:   96 MLGRLVVLLSL-VAPAAMVAGYDDRPMNEDEYFGARMQEHHQGAGLYQEPQGTGKVALVLGAIAGASIEWFWTGRAMKKGKKEIEKASEEFMVEWQRERETLMNRRTYPVKLLAHEVEEADVQLMQLVAAAEDAGAAVDIGXXXXX---STRQPYARSIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHREVEDY-ESELMRGMYDSSANSQGFNSLAQNLQRAQGR-GGRRY 899
            MLGR V +  L +A + MVAGYDDRPMNEDEYFGARMQEHHQGAGLYQEPQG+ K+ L+ GAIAGASIEW+W+ R+ KKG K +E+ S  F+ EW +ER+ LM RRTYP+KLLAHEVEEADVQLMQLVAAAEDAG  VD+G           +P ARSIQQDN+EYEEF+QPD +GDNVISK EF +YI KYLSLYPDTA+MDIP FEDFDLN+DG+V+FDEWQ+YLD+H++ + Y E++LMRGMYDSSA SQ FN+LAQNL R QGR GG RY
Sbjct:    1 MLGRRVFVCVLSLATSVMVAGYDDRPMNEDEYFGARMQEHHQGAGLYQEPQGSNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAG--VDLGAGGSGLGGGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPYAENDLMRGMYDSSAGSQNFNTLAQNL-RTQGRAGGGRY 271          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.120e-26
Identity = 86/229 (37.55%), Postives = 123/229 (53.71%), Query Frame = 3
Query:   96 MLGRLVVLLSL-VAPAAMVAGYDDRPMNEDEYFGARMQEHHQGAGLYQEPQGT-GKVALVLGAIAGASIEWFWTGRAMKKGKKEIEKASEEFMVEWQRERETLMNRRTYPVKLLAHEVEEADVQLMQLVAAAEDAGAAVDIGXXXXXSTRQPYARSIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHR 776
            +L   V+LL+L V  +    G D R   E+EYF ARM++  +  GLYQEPQ     + LV G + G  ++   T +A +K K   E   +      Q+ R   +N++   +  L   VE+A++++ +L  AA DAG  +DI              S  Q  ++YEEF+QPD N DN IS+ EF  YI  YL  YP     D+P+FEDFD + DG V F EWQ+YL++ R
Sbjct:    8 VLSSCVLLLALAVVRSQWDGGMDPR---EEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAG--MDI--------------SATQAEVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQR 217          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.270e-25
Identity = 82/219 (37.44%), Postives = 119/219 (54.34%), Query Frame = 3
Query:  129 VAPAAMVAGYDDRPMN--EDEYFGARMQEHHQGAGLYQEP-QGTGKVALVLGAIAGASIEWFWTGRAMKKGKKEIEKASEEFMVEWQRERETLMNRRTYPVKLLAHEVEEADVQLMQLVAAAEDAGAAVDIGXXXXXSTRQPYARSIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHR 776
            +A  A V    D  +N  EDEYFGARM++  QG  LYQEP +G G +  + G + G  ++   T RA KK  K  +   +    +  R R+  + +R   +  L  +V++A++++ +L  AA DAG  +D+G                Q  ++Y EF+QPD N D+ I++ EF  YI +YL  YP     D+PRFEDFD   DG+V F EWQ YLD+ R
Sbjct:    4 LATCAAVQAQWDGGLNPREDEYFGARMRQG-QGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAG--MDLGET--------------QTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQR 205          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A7S2SJ01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ01_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.130e-19
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  555 SIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHREVEDYESEL----------MRGMYDSSANSQGFNSLAQNLQ 869
            S+Q+D   YEEF+QPD NGD+VIS+ EF +YI  Y+  YP  A  + P FEDFD+N DG+VTF EWQ YL Q +  E  + +           +  +YD +A +Q F +L + LQ
Sbjct:  127 SLQRD---YEEFKQPDANGDDVISRAEFSQYIRNYMKAYPHIAPEEYPTFEDFDVNRDGLVTFQEWQEYLYQQQLAEQQQQQATGSRGRQQSAVNNLYDQTAGAQNFQNLYEQLQ 238          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A482SNT9_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT9_9ARCH)

HSP 1 Score: 86.3 bits (212), Expect = 8.110e-16
Identity = 43/115 (37.39%), Postives = 71/115 (61.74%), Query Frame = 3
Query:  558 IQQDNIE--YEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHREVE-----------DYESELMRGMYDSSANSQGFNSLAQN 863
            ++++ +E  YEEF+ PD N D++IS+ EF  Y+ KYLS +P+ ++ D P+F+DFD + DG+V+FDEWQ +L Q +  E               EL+  +Y+ S  +  ++SL +N
Sbjct:   51 LEKETVERDYEEFKAPDTNNDDMISRAEFNAYVTKYLSSFPELSEADFPKFDDFDQDEDGLVSFDEWQKFLVQQKLQEAQMKKNDKNNNSAYQELLSSLYEQSNQADSWDSLTKN 165          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A7S2VWM5_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.330e-11
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 3
Query:  576 EYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEW 752
            +Y+EF+QPD++GD+ IS+ EF  Y+  YLS YP  A+ D PRFEDFD +HDG V+F E+
Sbjct:  132 DYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLAEKDYPRFEDFDHDHDGYVSFSEY 190          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A6U3WRH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WRH6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.330e-11
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  576 EYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLD---QHREVEDY-----------ESELMRGMYD---SSANSQGFNSL 854
            EY+EF+QPD++GD+ IS+ EF  Y+  YLS YP   + D P+FE+FD + DG V+F E+   +    Q  E++ Y           E++    +YD   S+A+S GFN L
Sbjct:   98 EYDEFKQPDIDGDDRISRTEFHMYVKNYLSNYPGLTEKDYPKFEEFDHDKDGYVSFQEYAQQMAVQAQEAELDQYYAQSQGASGKKEAQKANALYDLYGSAADSGGFNDL 207          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: B8BTK8_THAPS (EF-hand domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTK8_THAPS)

HSP 1 Score: 75.5 bits (184), Expect = 3.680e-11
Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  576 EYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEW---------QIYLDQHR--------EVEDYESELMRGMYDSSANSQ----GFNSLAQNLQR 872
            EY+EF+QPDV+GD+ IS+ EF  Y+  YLS YP   + D P+FEDFD +HDG V+F E+         Q  LDQ+         + E  ++  +  +Y S+AN+     GF+ L   ++R
Sbjct:  175 EYDEFKQPDVDGDDRISRTEFNMYVKNYLSNYPGLTEKDYPKFEDFDHDHDGYVSFQEYAQQMAVQAQQAELDQYYAQSQGKSGQKEAAKANALYDLYGSAANAHTAGGGFDDLYAQIRR 294          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A1E7FKY8_9STRA (EF-hand domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKY8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.340e-11
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  555 SIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEWQIYLDQHREVEDYESELMRGMYDSSANSQGFNSLAQNLQRAQGRGGRRY 899
            ++Q+D   Y+EF+QPD++ D+ IS+ EF  Y+  YLS YP   + D P+FEDFD + +G V+F+E+   +    E  + E     G  +S+A +Q ++ LA      +G GG R+
Sbjct:  162 ALQRD---YDEFKQPDLDSDDRISRAEFSMYVKDYLSNYPGLTEKDYPKFEDFDHDGNGFVSFEEYSTQMAVQAEQAELEELYNNGSGNSAAKAQAYSDLA------RGAGGTRF 267          
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Match: A0A7S3Q1R5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1R5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.960e-10
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  552 RSIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDIPRFEDFDLNHDGMVTFDEW 752
            R ++    +Y+EF+QPDV+GD+ IS+ EF+ Y+  YL+ YP   + D PRFE+FD +HDG V+F E+
Sbjct:  137 REMEVMQRDYDEFKQPDVDGDDRISRAEFQMYVKNYLANYPGLTEKDYPRFEEFDHDHDGYVSFTEY 203          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig643.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FR63_ECTSI7.800e-11570.07EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CPR7_9STRA1.120e-2637.55EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A835YQF0_9STRA3.270e-2537.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SJ01_9STRA6.130e-1944.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SNT9_9ARCH8.110e-1637.39EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A7S2VWM5_9STRA1.330e-1155.93Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A6U3WRH6_9STRA3.330e-1139.09Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BTK8_THAPS3.680e-1138.33EF-hand domain-containing protein n=1 Tax=Thalassi... [more]
A0A1E7FKY8_9STRA8.340e-1136.52EF-hand domain-containing protein n=1 Tax=Fragilar... [more]
A0A7S3Q1R5_9STRA1.960e-1047.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig643contigP-littoralis_Contig643:111873..124036 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FR63
PFAMsEF-hand_5
Model size2213
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue1.26e-121
EggNOG OGs2E463@1|root,2SB4A@2759|Eukaryota
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-08_005250.1
DescriptionEF-hand domain pair
Cds size807
COG categoryZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig643.23.1prot_P-littoralis_Contig643.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig643 113184..123941 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791343.491247-UTR-P-littoralis_Contig643:111872..1131831680791343.491247-UTR-P-littoralis_Contig643:111872..113183Pylaiella littoralis U1_48UTRP-littoralis_Contig643 111873..113183 -
1680791343.6162872-UTR-P-littoralis_Contig643:123941..1240361680791343.6162872-UTR-P-littoralis_Contig643:123941..124036Pylaiella littoralis U1_48UTRP-littoralis_Contig643 123942..124036 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791343.5084524-CDS-P-littoralis_Contig643:113183..1132461680791343.5084524-CDS-P-littoralis_Contig643:113183..113246Pylaiella littoralis U1_48CDSP-littoralis_Contig643 113184..113246 -
1680791343.5238807-CDS-P-littoralis_Contig643:114734..1147941680791343.5238807-CDS-P-littoralis_Contig643:114734..114794Pylaiella littoralis U1_48CDSP-littoralis_Contig643 114735..114794 -
1680791343.5373635-CDS-P-littoralis_Contig643:115230..1153741680791343.5373635-CDS-P-littoralis_Contig643:115230..115374Pylaiella littoralis U1_48CDSP-littoralis_Contig643 115231..115374 -
1680791343.5491486-CDS-P-littoralis_Contig643:116470..1166591680791343.5491486-CDS-P-littoralis_Contig643:116470..116659Pylaiella littoralis U1_48CDSP-littoralis_Contig643 116471..116659 -
1680791343.5602107-CDS-P-littoralis_Contig643:116985..1170721680791343.5602107-CDS-P-littoralis_Contig643:116985..117072Pylaiella littoralis U1_48CDSP-littoralis_Contig643 116986..117072 -
1680791343.5719342-CDS-P-littoralis_Contig643:118498..1186101680791343.5719342-CDS-P-littoralis_Contig643:118498..118610Pylaiella littoralis U1_48CDSP-littoralis_Contig643 118499..118610 -
1680791343.5860424-CDS-P-littoralis_Contig643:120625..1207061680791343.5860424-CDS-P-littoralis_Contig643:120625..120706Pylaiella littoralis U1_48CDSP-littoralis_Contig643 120626..120706 -
1680791343.60512-CDS-P-littoralis_Contig643:123870..1239411680791343.60512-CDS-P-littoralis_Contig643:123870..123941Pylaiella littoralis U1_48CDSP-littoralis_Contig643 123871..123941 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig643.23.1

>prot_P-littoralis_Contig643.23.1 ID=prot_P-littoralis_Contig643.23.1|Name=mRNA_P-littoralis_Contig643.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=269bp
MLGRLVVLLSLVAPAAMVAGYDDRPMNEDEYFGARMQEHHQGAGLYQEPQ
GTGKVALVLGAIAGASIEWFWTGRAMKKGKKEIEKASEEFMVEWQRERET
LMNRRTYPVKLLAHEVEEADVQLMQLVAAAEDAGAAVDIGGGGGGSTRQP
YARSIQQDNIEYEEFRQPDVNGDNVISKPEFEKYILKYLSLYPDTADMDI
PRFEDFDLNHDGMVTFDEWQIYLDQHREVEDYESELMRGMYDSSANSQGF
NSLAQNLQRAQGRGGRRY*
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mRNA from alignment at P-littoralis_Contig643:111873..124036-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig643.23.1 ID=mRNA_P-littoralis_Contig643.23.1|Name=mRNA_P-littoralis_Contig643.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12164bp|location=Sequence derived from alignment at P-littoralis_Contig643:111873..124036- (Pylaiella littoralis U1_48)
ATAACGAAACCAGGCAAACCAAAGCCCCACACAGCAGCAGCAACCCACAG CAGCAGGAGGGAGAGCGCAGCAGCAGCAGCAGCAGCACAGGAACCATGCT CGGACGATTGGTTGTACTGCTTTCTTTGGTGGCACCGGCGGCCATGGTGG CCGGATATGACGACAGGTGCGTAGGAGGACGAGGAGGGCGGGGGTATGGA GGGGTAGGGGAGATGCGCGCGCATGGATTTTCTCCGGCGTTTCGTGTTTG GAGGTACTTCTGTACAGCAGTACCAAAGATGCAGCTTCCTGCTGGCCTAT CGTTCGCGTCTGGTGTCTACCATCTCTGTGTTCCCTGACCCACGCGGGGT CTTTGAGCCTTGAACCTTTCTCACAAACGGGGCAGATTCCTTGCCGTGTT AAAGGCCTAGTGGAACGTGAAATGATGCTGGCTGCTGTGTTGGCGTGATG CTCTGATGCTCTGATGCTCTTCGGTTTTGATGGGGCGGTGTGAACGAGAT TACCTATACAGCAGTATGATATCTACAGAAGTCGTGGTCATTTATGTGCA GCAGCTGGCAATACGTGTCGTCCTGTGAGGCCCTCCTCCTCTCTTCCCAG TTCGCGAGAGGGCGGAAGCCGTAGGCAGCGTTATCGCGGTCGGATGGAGC CTCTCGAATCCAAGGTCAAAGCGAGGCAGCCTCTCCGCAAAACCAAGGCC GCCGGACGAGCCAGCTATCGCAAAACCAAACAGAAACACACGAATCATAT TATACACATGTGTACACATACCATATTACGCAGTATATCATGACGAAAGT ACATACACACACAATCAGAAGACACGACACGCACACCCACACACACGAAC AGTCCTACACACGAAAGCACACACCCGAACCACAACACACGCGCACACGC TCAGCAAGACACCCCCAGACTGCTGTTAGTATCACACCGGTTTATCATAT CGTAGCACGTCAAAGGGTCACTGCTGTTGCTGGAGTTTCGTGTGTTGCGG ACATTTTTTTTCTTCTAATTTTTCCGATTTCCCGACAGACCAAACAACCC CAAGACACAGACAAGACGGCGGTGTTGACCTTTCGGTCCAACAACCGCCC TGTGTGTTTGTGTATGTTTTGTCTGTGTGTATGGTACATCAGTGTGTGTG TTCGTGTTCGTCCCATTTCTGGCGCCTGTTTATACACCGTTCGGTAGACA TCCTTGATTGACGCCCGGCCGGGGTCACGCAGCAGTACTCAAAAATAGGG GGTTTGTACAGGAATGCGAGCCTTCTGAATAAAACACACAACCAAAAGTT GAACATAAAGGCAGGGGTTTGCACAAATGCAGCTTTATTCCCGGAGGACC GAAAAATTACGCTGTTTATGACGTTGTCTCTGTATGATAGCAGCTGTCTG GGCCACAGATCGAAATTTGCTTCCCTGTAGAGTGTAAAACCCGGAGAGCT TTCATGACTCCCGGTAGGACAACGCCCGATAAATTCAGCCAAGTTCGCGT CCGATTCCTTTGTTGTTCTGGGATACTGCTGTACAAGCATGAGCACGAGT ACCCACGAGTGGAACGGCGGCGTCGTGCGAACGAACGCATCGGATCTTCC AGTTTTGGTCCACTTTCGGGCTGCTGCATGCATCGATGCAATGCTTTCAG TTCGCGAGAATACCCCTGAAGTCGTTTCTGCCTGCTTGCAGCTGCTGCCG CTGTCAAGGCATGGGACGCCACGAACACACCACATCGGTTGGCTGTGGCC ATTTCGTGGGTTGTGGTTGCGTACAGCCTGATGTGACGAGGTTGCGCTGC GCGCAGCCTCTGAAGCATAGTTGTCTGAGTTACTCCGCAGTCATTCATAG CAGTTTGTGCACGGCAAGATGGTGCTCAAAACGTTTATTTTGAGCTCCTC GATGTCGCGCTTCGAGGCCTCTACTGAGGAAAAAGCGCAGTATGATTAGG CGGGATCTATTGAGAAGGTCCAGGCCGCTGCGATCACGCACAGGGAAGCT GTTTGCTTCGTGTCTAGTGAGGCTTCAGCAGAAGAGAGCGGGATACGCGC GCGTACAGCAGTCTGGGGGGGCACCGTCAAGGGTGTTGCTGTCTCGAGAA ATTTGACGCGGGGAGAAATAAAAGTACACCGTCGGGCCGTTGGTATGTAC CAATAATACAACTGCCGAGCCCGTTAAACGAGGGGGATTTTCTTTAGGCA ACCCCCTTTTCTCCTTTTTCAAGTCAAGGTGTGTTGTAAAACAAAACAAT ACAAATGGTGTACCAGGTATGTCGATTACGGCAGTGCAGTAAATATTGGC AGCGTTCGCAACACAGCAGTTGCACAGCAGCAGCAGCAGCAGCGGCAGCG GCAGCATGTCGAAGACGCGAGGCGACGGGGTGCGGCAGCAGTCGCCGTGT GGGTCATTCTACCGCCGTACCGTAGCTGGTTCCCCACCCATCATCATATC ATACCACGTCACAGCTACTCTTTTGCGCAAAGGGGTCATGGTCGTGTCAC ACACGTACACACGATATTCGTCGCGTTGAAAGCAGTGCACTGCTCCTTCG AACGGGCATATCATCATGCAAGCGTGCTCGCTGCAAGGCCCCCCGGGTAC ATGATCAGCATGTCTCACTTGTTCCAGTATGCGATACCTCCATCTTTCCA CTTGAACCGGTACATAGCACTGCACCTCGCTGCGCCGTAAGGCTCCGGCG GGCACACAGGCCTCGCGAACAGCATCCCCGGATCAGCGCGTGTTGTTTGG ACACCGACTGCATATATATGATACAGGTAACGTGCAAAGTGTGATACATC CACACACAAACACACAGCATATGATACACACAGCATACATCGCCCTTTTT TTCATCTGAAATGCTTTTTTTTTACGGAGTATATCCTCCTGCTCCTGTAC GTGGCACGGCGGTGCTGCTAAACGTATCTGGTTTGTGACCACGGGCTAGG TTTTGGGGATGAGCTACTGCTGTTGTGATGTGATAAGTGATAAGTCAAAA GTCAACAAAGAATACGCACGCACGGATTTTATATGATGCGGGTGTGGGCT ATTTCCTGACCAACTTTGTTCGTGACGCCTCTGGGCGTGCTGTTTCATCT GCCTGCACTGAGCCGCGTTAACGTCTGCGCCCTTTTTTTTATGGTCGTTT TTGTTCTGTTTCTCGTACTTGTTTTTGTTTCCTTTCTTGTCGTTTGTTTG TCCGTCTCGGCTTTTCCGTCTCTATTGTGCCGTGCGTGCGCGTGCGTGTG TTTGATTGGCTGGCTGGAAACGGAACGGCCTCTCGGGGTGATCTGGGGTG ATCTGATTGGTTGATGCGTTTTCTTTTCAGACCAATGAACGAGGACGAGT ACTTCGGAGCCCGCATGCAGGAGCACCACCAAGGGGCGGGGTTGTACCAG GAGCCTCAAGGGTAAGAGAGAGACAGAGACCGAGACAGAGACAGAGACAG AGATAGAGGCAGAATGAGGGAGAGAAAGAGCGATAGTCAGAGGAAGAGGG ATAGAGTCGGAGTCAGAGAGAGGGACAGAGATAGAGGCAGAATCAGGGGG AGAAAGGGCGATAATCAGAGAAACAGGGATAGAGACGGAGTCAGGGAGAG ACAGACAGAGGGAGAGAGAGGCGCCGTAATTACCACATGGTGCGTTAAAC TATTGAATATGTCGTCGACAGCGGGAAGTAGATACAGTGCAAGGGTGTGT TTGCCAGAGAGGTGTTTGCCAGAGAGAGAGGGAGGCGACATGAGGTCCAG TTATTTCATATTTCAGAGAGTTCGGTTTGTTGCCCCGCGGGAGCGACGGG GGCTGATCTACGAACACAATGCCGAGGGTAGTGCGTATCTAGCACTGTAC CCCAAGTAGAGTACTTTTTGGTGTCTGCTGTGTGAAAATATAAAATGCGG GGTGTCGATTATCCCGTGCACATCATGTGTGACCTTCCTTCTGTGTGACC CTGGTTTGTGCACCCACTTCATACCGAAAGGTGTAGACTGCTGCCTAAAA CAAATTGGATGACAACACACACACACACCAAGCTCGTCTTTACCATGTTG CTGGAAGTAGGAATCCGTTGGTTACCCCGCAGCGCCACCGGTAGAGGTGG TGGGGCTTGACTCACAACAGTGTTTGTCCCAAATGACTGACAGGTAAAGT CTCGGTAAAGTAACCGTAACGTCTTTTACCCCAGCGGGAAAATTAGCGAT GTCGAGGTTGAACTATGTTTCACGACATGGTGGTGTTGGTGTTGATGATC AGTACCAACCGCAGGGTAGGAAAAGGGGGCCAATCTATTGCGGTGTATGT GAATACTACGACGTACTTCGTAGGTTACGTGCCATGATGATGTTGGTGTT GACGATGACGATGATGTCATTGCTGCTGCTGATGATCATGATAATGATGT TGGTGTTGACGATGATGTTGATGTTATTGCTGCTGCAGATGATCATGATA ATGGTTATAGTGATGTTGATGGTGGTGTTGGTGTTGATGTTGGTACAAGT ACAGCAGTATCGACGTTGATGTTGGTGTGAAGTATCCCTTCGGGACTCGG AAGGTAGCCTCAACCATTGATGTGTACAATAGCAAGTTTGACCTATGGTC ACGAAGACCGGGAGTAACGGGAATGTTGAACGTCAGTGCGTATGCATATG CATACCTGTTTGATGTTGAATTTGATTATGGTGTTTTTGTTGATGAAGGT GCTCATCCTGGTGCCAATGCTGATTTTCATGTTGATACTGATGCCAATGT TGACGTTGATGTTGACGTTGTTGATGATAATGATGGTGGTGGTGTTTTTG TTGATGAAGGTGTTCATCCAGGTGCCCCTAGCTGTCGATATTCATGTTGA TGCTGATGCTAAATGTTGTTGTTGACGTTGATGACGGTGATGATGAAGGT GTTCATGCCGGTGCCAATGTTGATATTCATGTTGATGCTGATGCTAAATG TTGTTGTTGACGTTGATGACGGTGATGATGAAGGTGTTCATGCTGGTGCC AATGTTGATATTCATGTTGATGCTGATGCTAAATGTTGTTGTTGACGTTG ACGTTGATGATGATGACGGTGATGATGAAGGTGTTCATGCTGGTGCCAAT GTTGATATTCATGTTGATGCTGATGCTATATGTTGTTGACGTTGACGTTG ATGATGATGACGGTGATGATGAAGGTGTTCATGCTGGTGCCAATGTTGAT ATTCATGTTGATGCTGATGCTGATGTTGTCGTTGACGTTGACGTTAATGA TGATGATGATGATGATGATGAAGGTGTTCATGCTGGTGCCAATGTTGATA TTCATGTTGATGCTGATGCTGATGTTGACGTTGACGTTGATGATGATGAT GATGATGATGATGATGATGATGAAGTGATATTCATGTTGATGCTAATGTT GTTGTTGACGTTAACGTTTTCCTCAGGACCGGGAAGGTCGCTCTTGTCCT CGGAGCGATCGCGGGAGCTTCGATCGAGTGGTTTTGGACCGGACGGGCCA TGAAGAAGGGAAAGAAGGAGATCGAGAAAGCCTCCGAGGTGACAAACAGA CTCAAGAAATGATGAACGACCATGACAAAACTACGGAGTACAGATTGAAT GCTTCGCATGTAATTTATGACCAAAGAAGCACTTCGTTCACAGCAGTAGA AGAAAATGTACTTCGTTCTCAAACATACTAGAAGAAAATTGATATCACAT GATATGATACGACAAAGTAAACGTGTATTGACCCCTCTGGAACCTGGCCA TTTTGGGCCTTTTCACACGGATGGGCCCGACTCCAAACCAGAACCATCTG TTCTCCCGAGAAACAGACAAGAATTAGCAGCTGTGAGCACACCAGGAGAA AATTCACGTACGAGCACCTCACAGACAAATAGCCAGGGCCCCTAACGAGG TCTCACAATAGGCTGGTAACATCCCTGGAGAGACCAGAAGGGTTACCCCG TGATCGCGATTCTGCCTTCTGCTCTCAAATGTCGCGGAATGACGGCTGTT CAGCACAGGCCTCCCTTGCCCATACCCCTCTAAACCCAGCATAATTCAGG AATAGCGCGTTTTTTTAGCGCATTTGTTCCCACTGGAGCCCTCACCCCTG ATTTTGTCAATCTCGGAAGGGGATCCGTAGCAGCAGTAGCGGGCCTACAC CTCTTGGTGTCATCATAACGATAGGGCCGGTTGCTGCTGCTTGGTGGTGT GGTACGAATCATTGCTGCTGTGGTCATGGTATGTGGCATGTTTCCTAGAT GGACTCTGCGCTGCTGTGTGGTTGCTGCGCGTTGTGTCGAGCGAAGGAAA TGATATACTTTTCGCGTATCATACACAGCTCAGTGAGTAGTACCGGTACG ATACGCTTGTGTGAAGCATTGTTATTGCTGCCCCCTGCCGTGTGCGAGCC TGCCCATCACGTGCATACACCTAAAAAAATACTTCGAAGTACGACTGTAC GACGTTCACACAGCAGCAGTAGTAGCAGTGTAGGTAAACAAGCTTGCCTA CGCGAAGTCCTTGGCGTGTTCGGGCAATAGCCGGAATCGACCAGGCTTAA AAAAAAAAAATGGAAAAAATGAACAATTTTAGTAAACAAAAAATCCCACC CCAAGACACAGAAGAGTTGATGCAGTAGAAGCGAGATACATAAATACAAG AGAGGCAGCAGGCACGTAATCCAAATATTATTTCACTAAACATGATGAAA TATAAAGTCAAATATAGTCAGCACGAAGTGTACAACATATTCTTTTACAT GTAATAATAGTGTGTTGCCGTATTGCTGTCCCTCGTCAACTTCGATGCGG AGCTTGTGCGTCAGCTAGATGCCAACCTTGACTCTAGGATGAACGATTTT GGTGGATTCAAAGGAGTAGCAGCACCGCATCATGACCATATGCATAGCAA GTTAAGAATCCCCCCACTTTCTCTCTTTTATTTGTTGTCACGACTCTTGC TACGTCTGTTCCAGGAATTCATGGTCGAGTGGCAAAGGGAGCGCGAGACT TTGATGAACCGGCGAACCTACCCCGTCAAGCTCTTGGCGCACGAGGTTGA GGTGAGCGAGAGGGAGGAGGAGGGGGGAAGGGAGGGGGGGGGGGGGCACC GAGAATTGTCCGAGCGATGGATTGTTGAACACTACTGGGAAATACGGGAC GAGTGTAGGTGGAAATGCCACCGATAATCGCTGTCACGGGTGCAAAATCA TTTTGTAGTTGGAAGAGATATCACCACAGCAGCAGCAGAGGGACGTGAGG GAGGGAGGGAGAGAGAGAGAGAGAGAGAGATAACTGCGATATCGTGTATC ATATCATCGTTCATGAAAAATTGTGATGTGTGCTTTGTTGGTGTATGATG TGATATTCTGCTGTACCTGGTATTTAGGAAGCGGACGTGCAGCTCATGCA ACTGGTGGCAGCAGCAGAGGACGCCGGAGCGGCGGTGGACATTGGGGGCG GGGGGGGAGGGTCGACCAGGCAGCCGTACGCCCGCAGCATCCAGCAGGAC AACATCGAGTACGAGGAGTTTCGGCAGCCGGACGTGAACGGGGACAACGT CATCAGCAAGCCTGAGGTGAGCGTCGTGGCGACGACGATTGTGATGCTGG TGGTGATGATGATGGTGATGGTGATGGTGATGACGCTGATGATAGCGATG GTGATGTCGGTGGTGATGGTGATGGTGATGATGATGATGATGGTGATGGT GGTGATGACGCTGATTATAGTGATGATGATGTCGGTGGTGGTGATGATGA TGTCGGTGGTGATGGTGATGGTGATGGTGATGATGATGATGATGATGATG GTGATGGTGGTGATGACGCTGATGATAGTGATGATGATGTCGGTGGTGGT GATGATGATGATGACGATGATAGTGATGGTGATGGTGATGGTGGTGTACT CGATTTTCTCGTGTCTTCGTCTTGATCGGGGGTGACATTTTGTCTTTCTT TCTGTGCAAGTGTGTCGCATGTATTATCTGCAGTAGCAGTGCAGTCAAAG TGTTTGCACACAAATAGAAAGAACGTATTTCCTTATGGGAGGCGTAGCCA AATGTGGAGGAACAACGTCGTGAACAAACAATCAAGGACGTTTTCGTTTC CATGACAGCAGTGCGAGGTGCTTATTTTTTGGAGCGTTCAGGGGGGCACT CGTTTGTTGCTTACCTCCTTTTTTTGGTTCCACCATATTCCTTGGACGTG CTTTCACCACTCATCTCGGCTCTCGTGTTGACCTTCCTCCCGTGTAACCC CGGCTGGTGTCCCAGCCACACCCAAAGATTTAGACTGGCATCCAGAGTGG AGGGGATGACATGACACAAACATTCACGCATTTCGGCTGTGTGTATGTAC GCAGGAGCGCCGTTTCGCATTCATTTTATTGCCTCGGCTTGTAGTGGATT TGTGTCCAGTCATATATGCGCTTGTGACAGAGAACTCTTGACGATATGAC GTACCAGCATTATAAACACACGTTTTGTAACGACCCTTTCGCCCCCATCC CTATCCCTATTCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTGT CCTCCTTTCGTTTTCCCTTTTCTCTCTCATTTTCTTGCATGACACCCGTT TTTTTTTTCCAAATCGTGTCTTGTCTGTTCGGTGGCCTACTGCTGTTACG TTCCTCTTTTAGTTCGAGAAATACATCCTAAAATACCTCTCGCTGTACCC GGATACCGCCGACATGGACATCCCTCGCTTCGAGGACTTCGACCTCAACC ACGACGGGATGGTGACCTTCGACGAGTGGCAGATCTACCTCGATCAGCAC CGAGAGGTAATGAGCCGTTTTATACAGGTTATGAGCCGTTTCATGGAGTA CAAATTATACCGCTGTGTGTTGTTTACGTAGAGAGCTTTTTCGTAGGTCA TCATGTGGAGAGGAAAAAAGCAAACGGGGGGGAGGTTGTGGTGTAGTTGT CATAGTTGTGATGAGAGGAGAAAGAAGGAAACGGGGGGAAGTCGTGGCTA GTTGTCATACATAGCTGTGGCAGATCTACCTCGACCAGCACCGAGAGGTT ATGAGCCGTTTCATACATACAGTACTGTATGATATGACAGATGTCGTGTA TCATGTCGTTTATATGTTGAGAGCTTTTTCGTACTCTCGGGCAGCAGTTG CACTGGGTGAGTCAGTACATTGCGGTATCCCCCCGCGCGCGCGCGCGCTG ACCTCTTTAGTATCCCTGTCACCCCCACACACCCTTTTTCAGGTCGAAGA CTACGAGAGCGAATTGATGCGCGGAATGTACGACTCTTCGGCTAACTCGC AGGTATGATATGTGTGTACCACGGCATGGCAGGTGCCGTGAAGTGAAAGA AGCCCACTAGTTTCCCACTAGTTTCCGTTCGCGTCTCGGCGATTCTTCGT CGTAACGTTACAGCAGCACCATACAAGTACACCAAAAACCCATGCCAGGT ATGATGCAAGTCCACCAAAAGCCGCCGCTCTCACGAAGAAGCCCCGATCA TTGATCGCCTGATAGCCTGGGCCTCGTTTTCTGTCCCGCGCGCGGCGAGG CTCACGTCTTTCTGGAGAAGGAGGTTTGACGTCGAAAGGCGGTGGAGGGA ACGGCAACGTTGCTGCGGCTTTACTGCTCTAAACTCCCCTTGAACGGCGT TGCCTGTGGGTTTCATTCGCACTTCAGTTCATCTACTTTTCAAAAAGCCA CTTCCTCAATTTTTTCGTTTTTTTTTCATGCTATATTACTTGGCGAGTTC CCGCCGTTCCCGCCGTGAAACGGCGGCCGAAGGTGTCAACACTGCAGTGA CTCTGGGGGTGTTTCGAGCTCCTTACGAGCTCGCCACGTTTTGATCTCAA AGCGTGGTTGTTGATTCTGCCCGTTTATGTAGGCGAATCGCGTCGCCACA CAGACCGATTCCGCGGGATCCTCCGACACCACTCCAAGCAAGTAAAAATT GCCCATACAGCACGAAGCACCCGTTTCAAACGAAAACTTTCGAAAATGAC TGCTGTGCGGTCGTATCGTGGTGGCTGAATGTGGGTAAGTGGTGGGATGG TAGAAAGTTCGAGTGGCGGGTTGTGGATGGGATGGGAAGCAACTCCGGGT GATGGGATGGTATAGTCGATGGGATGGTATATGATATGCAGACATGCCAC CGGATGGCAATTGATGGGCTGCACAAACCACAGCAGTGATGGTGGTGGGA TGGGTGATGGGAATTAAATTCCTCGACCCATCCCATTACTGCCATCCCGT ATGTGATGGTAGTACCATCCCATCGCATTTGCCACTTTAAGCGAGCGAAA ATCGCCCACACCACAACAAACAACAAGTTTCGAACATGTATGAACGCTTG CCTTGGAGACGATTCGTCAGTCTTTCGGGGATCCGTTTTCAGTCACCACT TCTCTTTATACTAATAAATACGAAAGTAATTTAATTAATTAGTACAGTCC GAGTATTTTATTATTAATTCATTTGATTTATTTACGTATTAGTCGGAACG ATGTGTGTCATTTGGTGATACTCAAGATCCTTTCTATTTCCTCTCCCTCT TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGTTCTTTCGTTCTTTCGTT CTTTCGTTCTTTCGTTCTTTCGTTCTTTCGTTCTTTCGTTCTTTCGTTCT TTCGTTCTTTCTTTCTTTCGTTCTTTCGTTCTTTCTTTCTTTCTTTCTTT CGTTCTTTCGTTCTTTCGTTCTTTCTTTCTTTCGTTCTTTCGTTCTTTCT CTTTTTCTTTTTCTTCTTCCAACGTCGGAAAAAAAAACAGGGTTTCAACT CGTTGGCCCAGAACCTGCAACGCGCGCAAGGGCGGGGAGGGAGGCGATAC TAAAACCTGAGGAGGGGCACGGGGGGTGGGGGAGGGGAGGGGGGGGGGTA GCTTGCCCACCGCCCACACCCCCAAAGTTTTCGGCCTTCCGTACGTTGGT TGATATTGCGGGGGTGCGTGTGCGTGCGAACCATCGCAATTGAAGAGGCG GGGCCGAAAGGGGGTGGCATGGCGGTGGAATATGAAATGATGCGCTGTTT TTTTGTACCGTATGTTTTCTGTTTTCTGGGTGGCGTTTTTTTAGGGGGGA AGCGCGGAGGGATGGGTGACATTGACACGACTGGTGGGGTATCATATGGT GGGCCTGCCGCACCAGCAGGTGAAGAAGGCGAGGTGGAACGGTGCTGCGT CACGCTGTCCGGACGCTTGTGATAAATGCCCGTGACAACAGCACACGAGT GTCGTCTTTGGCCATGTTTTTTGTTGAGTTGGATAGGGCCTGGGGCTCTG GGGTTTGGATTTTTTGGGGACGTTGCGCGGGGGGGTCGGGGCAAGATTCG AGTACCATGCAGCACGTCGTGACGAAAAACGTGGCTGAAAAGAAGTTTGA AGGGACGATTAGGGCTGTCTGGATTATTTTTTTCAACATGGCGTGTCTCT CAAGAGTTGTTGCCTCGCGGGAGGATCGAAGAATTGAACCGGAGACGGTT GTGACGTGTATCATATCATGCTGCTGGCCGTTGACGCGATGCTATCATAA ATATGACGCCGTGAGGACCAGGGGGTTGGCGGGTGCTGAGGGACGCGAAT GCCCTGCATCTGGAAATGGTTTTCTCGTTGCTTATTTTTTTCAATATTTC GCAGCCTTCGTCTTTTATTCCCATTTGATTTCAGCAGGTCAGATATTTTT CGTTCGCTGTTTTTGTCTTGTTCTGTCCTTGTCTTGTTTGTCTGGCGGAT TACGGAACAAGACACGAGGTTTGATGGTTTTAGTCTGACTTTTCCCGCTG AGCTTGTAATGGGTGTAAGTCCCTGTGCTGCATGGATGCTTGTTTCGTAC ACCGCGGATGAGATAAGTGCTGTACCGTGTATCACCCCCCCCCCCTCCTC AAACTAAGCTGCAGCACCGGGAAGGAAGGGTCTCGTCAAAAGTCGAACAA CTTTTCCGGAAAGATGATGTTTCCCACCCCCCTCAACACTACTAGCTTGA TACGATAATGTATGACTTGATGCCCCTGATTACACAGCAGTAACGTGGCG CAAACGCGCCCGCCTGACCGCTGACAGATTTTTAATGGGGGTGCCCTAGA AAACAAAGAAAAAGAAAAAAAAGAAAACGTTCCCAGCAAATACGTTCCCA GCATAAACTTTCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig643:111873..124036-

>mRNA_P-littoralis_Contig643.23.1 ID=mRNA_P-littoralis_Contig643.23.1|Name=mRNA_P-littoralis_Contig643.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=807bp|location=Sequence derived from alignment at P-littoralis_Contig643:111873..124036- (Pylaiella littoralis U1_48)
ATGCTCGGACGATTGGTTGTACTGCTTTCTTTGGTGGCACCGGCGGCCAT
GGTGGCCGGATATGACGACAGACCAATGAACGAGGACGAGTACTTCGGAG
CCCGCATGCAGGAGCACCACCAAGGGGCGGGGTTGTACCAGGAGCCTCAA
GGGACCGGGAAGGTCGCTCTTGTCCTCGGAGCGATCGCGGGAGCTTCGAT
CGAGTGGTTTTGGACCGGACGGGCCATGAAGAAGGGAAAGAAGGAGATCG
AGAAAGCCTCCGAGGAATTCATGGTCGAGTGGCAAAGGGAGCGCGAGACT
TTGATGAACCGGCGAACCTACCCCGTCAAGCTCTTGGCGCACGAGGTTGA
GGAAGCGGACGTGCAGCTCATGCAACTGGTGGCAGCAGCAGAGGACGCCG
GAGCGGCGGTGGACATTGGGGGCGGGGGGGGAGGGTCGACCAGGCAGCCG
TACGCCCGCAGCATCCAGCAGGACAACATCGAGTACGAGGAGTTTCGGCA
GCCGGACGTGAACGGGGACAACGTCATCAGCAAGCCTGAGTTCGAGAAAT
ACATCCTAAAATACCTCTCGCTGTACCCGGATACCGCCGACATGGACATC
CCTCGCTTCGAGGACTTCGACCTCAACCACGACGGGATGGTGACCTTCGA
CGAGTGGCAGATCTACCTCGATCAGCACCGAGAGGTCGAAGACTACGAGA
GCGAATTGATGCGCGGAATGTACGACTCTTCGGCTAACTCGCAGGGTTTC
AACTCGTTGGCCCAGAACCTGCAACGCGCGCAAGGGCGGGGAGGGAGGCG
ATACTAA
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