prot_P-littoralis_Contig643.20.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig643.20.2
Unique Nameprot_P-littoralis_Contig643.20.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length596
Homology
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: D7FR69_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR69_ECTSI)

HSP 1 Score: 877 bits (2265), Expect = 2.680e-315
Identity = 462/540 (85.56%), Postives = 484/540 (89.63%), Query Frame = 0
Query:   56 GGEGKGFWTDDAG--GFEEPPS--FLESSGRGDAASRP---WEEPAAADAAEAGFLQEEDDEAEWMAGQEVDPEAEAIFFGDRVPFSDLGLSPALCGHLEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVTAAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKKYGPSRTFQG 588
            GGEGKGFWT+D    GFEEPPS       G G  ++ P   W+  AA DA EAGFLQEEDDE EWMAGQEVDPEAEAIFFGDRVPFSDLGLSPALCGHLEALGIG STAVQAAAVPGILSGED+IVGAETGSGKTLAYLLPIVERVLRG A+AK LP+ELLGNARGWPMFPDV+VLVPNKELC+QVHSVLKGILKAL+ADG T VTAAA YGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLV+DEADMLMEGSY+KQLDDILVAFRRADRV VEE  +VDG+ + RGIDKTQYVLAAATLPTYGLKSVDQYIKRAFP ARKIQQVHMHRHHPAIQ             Q FVEVGGQVFDKIQAVIDLLR++ S+ DTSRTMVFTNTAASCKRAYEAL+EEGFSVVPYHK+ VPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDD TKDLVNSI E GEGSRLDGSFSRQRGFR+KFKKYGPSR +QG
Sbjct:  137 GGEGKGFWTEDEEVVGFEEPPSSTLFRERGTGGTSAPPIAAWDGDAA-DAGEAGFLQEEDDETEWMAGQEVDPEAEAIFFGDRVPFSDLGLSPALCGHLEALGIGGSTAVQAAAVPGILSGEDMIVGAETGSGKTLAYLLPIVERVLRGQAVAKDLPDELLGNARGWPMFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPIVDGRGRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQ-------------QNFVEVGGQVFDKIQAVIDLLRDTVSDADTSRTMVFTNTAASCKRAYEALAEEGFSVVPYHKDIVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDLTKDLVNSITEVGEGSRLDGSFSRQRGFRRKFKKYGPSRRYQG 662          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A6H5KBP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP8_9PHAE)

HSP 1 Score: 828 bits (2139), Expect = 2.410e-299
Identity = 425/475 (89.47%), Postives = 443/475 (93.26%), Query Frame = 0
Query:  114 MAGQEVDPEAEAIFFGDRVPFSDLGLSPALCGHLEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVTAAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKKYGPSRTFQG 588
            MAGQEVDPEAEAIFFGDRVPFSDLGLSPALC HLEALGIG STAVQAAAVPGILSGED+IVGAETGSGKTLAYLLPIVERVLRG A+AK LP+ELLGNARGWPMFPDV+VLVPNKELC+QVHSVLKGILKAL+ADG T VTAAA YGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLV+DEADMLMEGSY+KQLDDILVAFRRADRV VEE S+VDG ++ RGIDKTQYVLAAATLPTYGLKSVDQYIKRAFP ARKIQQVHMHRHHPAIQ             Q FVEVGGQVFDKIQAVIDLLR++ SETDTSRTMVFTNTA+SCKRAYEAL+EEGFSVVPYHK+ VPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDD TKDLVNSI E GEGSRLDGSFSRQRGFR+KFKKYGPSR +QG
Sbjct:    1 MAGQEVDPEAEAIFFGDRVPFSDLGLSPALCSHLEALGIGDSTAVQAAAVPGILSGEDMIVGAETGSGKTLAYLLPIVERVLRGQAVAKDLPDELLGNARGWPMFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGSVVDGSVRRRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQ-------------QNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTASSCKRAYEALAEEGFSVVPYHKDIVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDLTKDLVNSITEVGEGSRLDGSFSRQRGFRRKFKKYGPSRRYQG 462          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A836CM84_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM84_9STRA)

HSP 1 Score: 335 bits (860), Expect = 5.980e-103
Identity = 221/566 (39.05%), Postives = 292/566 (51.59%), Query Frame = 0
Query:  147 LEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALD------------ADGNTDVTAAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLV-------------------------------------------DGQI---------------------------------------------KMRGIDKT-------------------QYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQ---AVIDLLR-----------ESGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKK 579
            + A G   STA+QA A+P IL+ +D+++GAETGSGKTLAYLLP++  ++    +    P ELLGNAR W MFPD I+L PN+ELCEQV  V   +L+ L             A  NT  +  A+YG+S++YP+S  +PAP +LVCTP+FL  Y  +++IPLF +A  LV+DEADMLM+G Y + L DIL  FRRA RV   + +L+                                           DG+                                                 G+ +T                   QY+LAAATLP+YGLKSV+  ++RAFP A +I   HMHR HPA+             RQE+V V G          A+++ LR           ++    +  R MVF NTAAS + A+ AL   G +  PYH +    +R A L+  R+GRA+ LVCTDLAARG+D+P V ++VQ E A+NVVQHLHRLGRAARAGR G AT  +D S   L  S+  AG+   +D SFSR+RGFRKK KK
Sbjct:    1 MAARGSPCSTAIQAMAIPEILARKDVVIGAETGSGKTLAYLLPLMHDLMT-RTLEDPSP-ELLGNARSWGMFPDAIILTPNRELCEQVRGVAAQLLEELGNPLRGEERAHEAAVLNTHTSIEALYGASFDYPYSEARPAPQLLVCTPAFLAGYGALRSIPLFVRARALVIDEADMLMDGDYARLLGDILTGFRRAARV---DAALLPPCRRKPAPAYDADARSGGSSGGATHAEXXXXXXXXXXXXXXGDGEAGGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAAGGXXXXXXXSGVRRTWRGPRAAAGASGGEVPAGAQYILAAATLPSYGLKSVEALVRRAFPRATRITADHMHRQHPAL-------------RQEWVRVEGPPGPSAARDVALLEALRAANTAAGIGDDDAAGAAEPLRAMVFCNTAASARAAHAALEAAGVAAAPYHGDVPAAQRAALLNEFRAGRARALVCTDLAARGLDIPGVDHVVQYEFASNVVQHLHRLGRAARAGRRGVATTLWDASCAALAESVRAAGDAGGVDASFSRKRGFRKKLKK 548          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A0G4ESI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESI9_VITBC)

HSP 1 Score: 323 bits (829), Expect = 1.920e-100
Identity = 195/471 (41.40%), Postives = 273/471 (57.96%), Query Frame = 0
Query:  127 FFGDRVPFSDLGLSPALCGHLEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLR-----GHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVTAAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTN---MKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVI-DLLRESGSET-DTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEA--------GEGSRLDGSFSRQRGFRKKFKK 579
            F+G+ VPFS L L P+L   L   G   +T +QA  +P IL+G+D+IVGAETGSGKTLAYL+P+++R+LR     G A A        GN     M+P  +V+VPN+ELC+QV+   + + + L       VT   ++G    +PF+P +PAP +L+CTP FL ++T    +K I LF    TLV+DEAD+L++G YKK L+ +L  FRR+ R               +G   TQ+++ AATLP  G  SVD +++R FPEA +++   MH+H P +QQ   P    A  R         + DK+  +  D     G E  D  +T++F NT  S K    AL + G  VVP H +    ER++NL A R G + ILVCTDLAARG+D+P +  ++Q + A NVV HLHR+GRAARAG  G A NFY   ++DLV+ I E+         +G  L+ +FSR R  RKK +K
Sbjct:   57 FYGEYVPFSSLRLHPSLVQQLSQTGKDTATLIQALGIPSILTGDDVIVGAETGSGKTLAYLVPLLDRLLRENEREGEAEASDGSG---GNTDRSRMYPRAVVMVPNRELCDQVYRWAQELARPLG------VTTEMVWGGYESWPFTPAQPAPDVLICTPLFLGRFTKGGCVKDISLFQSVDTLVVDEADLLLDGGYKKDLEAVLTVFRRSGR---------------QGAP-TQHIMVAATLPNRGSGSVDAFLERRFPEALRVRNSLMHQHLPGMQQDFIPIGYDASTRDRL----NMLVDKVTEMQRDRASRGGEEAVDVGKTIIFANTVNSAKAVANALFDVGIPVVPCHADLRAAERISNLDAFRRGISSILVCTDLAARGLDIPRIATVIQFDFAPNVVAHLHRVGRAARAGXAGHAINFYGKDSEDLVSMIQESLKVAEERGSDGGLLEQAFSRNRSLRKKLRK 498          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: W7TS57_9STRA (RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS57_9STRA)

HSP 1 Score: 324 bits (831), Expect = 5.890e-99
Identity = 210/503 (41.75%), Postives = 277/503 (55.07%), Query Frame = 0
Query:  128 FGDRVPFSDLGLSPALCGHLEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGN------------------------ARGWPM-FPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVTAAAMYGSSYEYPFSP-NKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQA---VIDLLRESGSE--------------------TDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKKYG 581
            FG+ +PF+ LGLSP L   L   G   ST +QA A+P IL+GE++++G+ETG+GKTLAYLLP++E   R HA    +  + L                          A  +P   P  IVLVPN +L EQV  +   +L     +G  +V   A+ GS   +P+   ++ AP +LVCTP+ L  +   + + LF +   LV+DEADML+EG Y + L+ ILVAF+RAD++              R    TQYVLAAATLP+YGLKSV++ +K+ FP A ++    MH+HHP + Q              FVE    +  KI     V++ LR  G E                    T   +TMVF NTA +  R   A+   GF  V +HKE    ER ANL   RS +  +LVCTDLAARG+D+P V  +VQ+E A NVVQHLHR+GRA RAGR G+A NFYD    DLV S+  A +   L+ SFSRQRGFRKK KKYG
Sbjct:  149 FGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLG--QGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFD--REVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHT-----------ARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQV-------------FVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEXXXXXEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLA-QADTLERSFSRQRGFRKKIKKYG 622          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A7S2XFB3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFB3_9EUKA)

HSP 1 Score: 244 bits (622), Expect = 6.460e-72
Identity = 143/328 (43.60%), Postives = 201/328 (61.28%), Query Frame = 0
Query:  258 MYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLME-GSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDTSRTMVFTNTAASCKRAYEALS---EEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKKYG 581
            + G   ++PF P  PAP ILVCTP  L ++  ++ + LF    TLV+DEADML++ GSY+  +++ILVAF+RA R              M     TQ+VL+AAT+P  GLKSVD+ I++ FP A  ++   MH+HHP+ Q             Q+FV+      DK+  V++ L +     D  +T+VF NTA   +R  +AL    E    + PYHK+    ER + L   R     +LVCTDL ARG+D+P V +++Q + ATNVVQHLHR+GRA RAG  G++TN YD++ +DLV++I+ AGEG+ LD SFSR+RGFRK  K+YG
Sbjct:    3 LIGVERDWPFRPRLPAPDILVCTPKMLRQF--VRDLDLFAGIETLVIDEADMLLDRGSYENDINEILVAFKRATRT-------------MATNVPTQFVLSAATIPNMGLKSVDRSIEKRFPNAEHVRAKLMHKHHPSTQ-------------QDFVKTTKDFDDKVSKVLESLEKHSK--DNPKTIVFANTAKDAQRFADALMDVYEHPDLIFPYHKDIPADERDSVLGLFRKTPNGVLVCTDLGARGLDIPDVRHVIQAQFATNVVQHLHRIGRATRAGXXGRSTNLYDEANEDLVDAILAAGEGN-LDHSFSRRRGFRKTVKRYG 299          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A7S3ZMN7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMN7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.800e-66
Identity = 167/432 (38.66%), Postives = 227/432 (52.55%), Query Frame = 0
Query:  157 AVQAAAVPGILSGED-LIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVT--------AAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGEGSRLDGSFSRQRGFRKKFKK 579
            AVQ AA+P +L  ED  +VGAETGSGKTLAYLLP  +R +               N R    +P  +VLVPN+EL  Q    L+ +   L AD     T         A   G+   +P++P K AP +LV TPSF   +   + + L+   +TLV+DEADML++G +KKQLD  LVA +R +R +   + LV+        ++ + V+ AATLP  GL+SVD  + + F  A +   + MH                     E V    Q  D+  A ++ L ES     T RTMVF  TA       E L+  G +  PY K+  P  RLA L    S +  +LVCTDLAARG+D+P V  +VQ + AT+ V HLHR+GRAARAG    A +F D S  DLV ++     G  ++ +FSR+RG RKK +K
Sbjct:   60 AVQRAALPALLKQEDDAVVGAETGSGKTLAYLLPAAQRAV--------------ANRRKHTPYPAALVLVPNRELGTQ----LRRVAARLGADTQPPFTDESKLFSLEARHGGALARWPYAPGK-APDVLVATPSFAAAFD--RDLDLWEGLSTLVLDEADMLLDGGFKKQLDRCLVALKRVERRREGNDDLVEDVP-----ERCRRVVVAATLPNQGLRSVDGLVTKYFANATRCADLPMH---------------GVVSTLEHVFESVQSDDERDAKLNDLLES-----TERTMVFCKTANRASAVSERLALGGIAAAPYTKDVDPERRLATLDLFASAKINVLVCTDLAARGLDLPEVKRVVQYDFATDAVSHLHRVGRAARAGAAASAVSFVDSSNTDLVAALER---GDTVEHAFSRRRGLRKKLRK 442          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A2C6LGE9_9APIC (Dead deah box helicase domain-containing protein (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6LGE9_9APIC)

HSP 1 Score: 236 bits (603), Expect = 8.380e-66
Identity = 157/465 (33.76%), Postives = 249/465 (53.55%), Query Frame = 0
Query:  130 DRVPFSDLGLSPALCGHLEALGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPM---FPDVIVLVPNKELCEQVHSVLKGILKALDADGNTDVTAAAMYGSSYEYPFSPNK--PAPSILVCTPSFLHKY---TNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQASTPGKACAGERQEFVEV--GGQVFDKIQAVIDLLRE-SGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVP--YHKETVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDLVNSIMEAGE---GSRLDGSFSRQRGFRKKFK 578
            + V F  +G+ P     L+ LG+  +T +Q  A+P IL G D ++GAETGSGKTL Y++ +V+ +L    I +   +  +      P+    P  +++VP +EL  QV + ++ + +       T +TA  M G+   +PF       +P ++VCTPS L  +   T  K++  F +   +V+DEADML++G Y++ +D I  AFR+AD+           Q+      +TQY+ AAAT+P  G KSV + I    P+A       +H+H   +              QEF+EV  G    D++  ++  LRE SG+E    + M+F NTA + +R  + L +E  +  P  +  +    +R  NL     G+ ++LVCTD A+RG+D+  VT +VQ + A + V HLHR+GR ARAG+ G+A NF+ +  K LV+ + EA      + +  +FSR+R FRKK K
Sbjct:  206 ENVSFPRIGIFPDFAEALQGLGVTRTTDIQQLAIPAILGGLDTVIGAETGSGKTLGYIIGVVQNILIQKMIHEKKEDAAMMEKEALPIPRHHPYAVIIVPTRELALQVVAWVRRLCR------KTTITAQLMLGTYTRWPFGTLALPTSPDLVVCTPSVLAPFARGTKTKSLGPFREIQVVVLDEADMLLDGGYRESMDAIFTAFRKADQ-----------QLAREKRRRTQYIFAAATIPDRGPKSVRKTITSLCPKATFFYTRSLHQHKEQL-------------AQEFIEVPPGASEEDRMALLLGKLRELSGNE----KVMIFCNTAQTAQRVLKTLEKEIPASRPKLFSSDIDQKDRAFNLGLFSRGKCRVLVCTDAASRGLDIVGVTLVVQYDFALSAVSHLHRVGRVARAGQPGRALNFFSEDQKLLVSIVQEAARDPHSTSVAAAFSRRRSFRKKIK 636          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A7S4AS34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AS34_9STRA)

HSP 1 Score: 235 bits (599), Expect = 6.900e-65
Identity = 187/553 (33.82%), Postives = 266/553 (48.10%), Query Frame = 0
Query:  124 EAIFFGDRVPFSDLGL-SPALCGHLEALGIGHSTAVQAAAVPGILSGE---------------DLIVGAETGSGKTLAYLLPIVERVL--RGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVH----------------------------SVLKGILKALDADGNTDVTAAAMYGSSYE----------YPFSPNKPAPSILVCTPSFLHKY-TNMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHR-HHPAIQQASTPGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDT---SRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLH-----------ALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAG-RTGKATNFYDDSTKDLVNSIMEAG--------EGSRLDG----------------SFSRQRGFRKKFKK 579
            +  F G  V F  +G+ SP L   L  LG+   T +QA     IL  +               D+ +GAETGSGKTLAYLLP+++ +L  +  +   GLP+     A         IVLVPNKEL +QV                             S L    KA + D +T V  A M G+  E            F  + P   ILV TP+ L       K I LF    TLV+DEADML++G Y + L+++L+ FRRADR+        D Q     I KTQ+V  AATLP  GLKSV+ Y+++ FP A++I+  +MH   H  + QA+         +   VE   +  +++  ++  + + G+  D     +TMVF N+    +  ++AL + G + VPYH +    ER  NL            A+++    +L+CTDLA+RG+DVP VT +VQ++ + NVV HLHR+GR  RAG RTG+   FYD+   +L+  + EA         EG  +D                 +FSR+RGF KK KK
Sbjct:  166 DGFFAGSDVTFESMGVQSPVLLKRLNNLGLTQPTQIQAKTFAKILGTDNDSLEAEGSSRLWANDVTIGAETGSGKTLAYLLPLLDSILQEKAESATNGLPSYDYARA---------IVLVPNKELVQQVLRMAVPLCGGSIEETVVWAQGGNALMEQLSPLAASQKAGETDPSTIVRMAVMPGALKEPMDFKPFRDSIGFGGDDPPVDILVSTPAALGPLGLPPKFIDLFADVKTLVVDEADMLLDGGYIRSLENVLIGFRRADRLVDPNADPDDDQT----IQKTQHVFCAATLPDVGLKSVNAYLEKRFPYAKRIETGNMHNAKHYGLSQAT---------KWYQVETKKERMERLAEMLLTVPDDGNSNDGLKGEKTMVFLNSVGDVEAVHQALVDRGVNAVPYHAKVSLNERSENLDRFRRYTEGGDDAVKNDAVPVLICTDLASRGLDVPGVTAVVQLQFSGNVVSHLHRMGRCGRAGQRTGRGIIFYDEKEAELIEVVQEAETQQEKMQLEGQEVDDRLDDDDGKAKKGKVQKAFSRKRGFTKKRKK 696          
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Match: A0A7S4UVP1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UVP1_9STRA)

HSP 1 Score: 227 bits (578), Expect = 4.360e-63
Identity = 185/533 (34.71%), Postives = 258/533 (48.41%), Query Frame = 0
Query:  127 FFGDRVP---FSDLGL-SPALCGHLEA--LGIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAIAKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDA--------------------DGNTD--------VTAAAMYGSSYEYPFSPNK------PAPSILVCTPSFLHKYT-NMKAIPLFCKATTLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMH--RHHPAIQQASTPGKACAGERQEFV----EVGGQVFDKIQAVIDLL---RESGSETDTSRTMVFTNTAASCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAK-------------------ILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAG-RTGKATNFYDDSTKDLVNSIMEAG--------EGSRLDGSFSRQRGFRKKFKKYG 581
            FF D      F  +G+ SP L   LE+  L +   +AVQA++   I  G D+ +GAETGSGKT AYLLPI++ +L+     K   ++  G   G       ++LVPNKEL  QV  +   +   LD                     DG  D        +    +       PF  ++      PAP I+V TP+ L     + K I LF    TL++DEADML++G Y +QL+++L+ FRRADR       L +   +  G  +TQ+V  AATLP  GLKSVD ++K+ FP A +I    MH  RH+              G R+  V    E GG   +++Q ++ LL   RE G   D  + MVF N+      A  A    G + VPYH +    ER +NL   R  +A+                   +LVCTDLAARG+DVP VT +VQ++ A NVV HLHR+GR  RAG R G+   FY  S ++LV  + EA         EG  +D   + + G +KK ++ G
Sbjct:   55 FFADESTHPTFQSVGITSPVLLSRLESPPLQLKRPSAVQASSFVSIAGGGDVTIGAETGSGKTFAYLLPILDDILQRK---KNSEDDYYGYDYG-----RAVILVPNKELANQVVRMASTLCGGLDKCLLSNDRFVPPSMMPSGSAEDGEVDESDIVRITIMPGGLKAPEDFRPFRSSRGLGGEDPAPDIIVTTPASLGPLALSPKNIDLFADIQTLIIDEADMLLDGGYIRQLENVLMGFRRADR-------LANSSAEF-GASRTQHVFVAATLPDMGLKSVDSFLKKRFPYAARITMAGMHNARHY--------------GLRERTVWIEDEDGGSNKERMQTLVKLLNTPREEGG-LDGEKVMVFLNSVEDVDGATNAFRRGGINAVPYHAKIQLAERSSNLDKFRRYKAEMDDGLFPTDENDEGNDAVPVLVCTDLAARGLDVPGVTAVVQLQFAGNVVAHLHRMGRCGRAGNRDGRGVIFYGQSERELVEVVREAEAQQERMTLEGDVMDEEETGEDGAKKKKRRRG 556          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig643.20.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR69_ECTSI2.680e-31585.56DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KBP8_9PHAE2.410e-29989.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM84_9STRA5.980e-10339.05P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0G4ESI9_VITBC1.920e-10041.40Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TS57_9STRA5.890e-9941.75RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae... [more]
A0A7S2XFB3_9EUKA6.460e-7243.60Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3ZMN7_9STRA1.800e-6638.66Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2C6LGE9_9APIC8.380e-6633.76Dead deah box helicase domain-containing protein (... [more]
A0A7S4AS34_9STRA6.900e-6533.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4UVP1_9STRA4.360e-6334.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 151..397
e-value: 4.7E-21
score: 85.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 163..379
score: 18.141987
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 453..534
e-value: 1.4E-22
score: 91.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 421..534
e-value: 2.1E-21
score: 76.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 422..574
score: 18.152309
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 156..362
e-value: 1.8E-26
score: 93.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 409..585
e-value: 3.0E-39
score: 137.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 106..380
e-value: 5.6E-45
score: 155.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 221..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 127..562
NoneNo IPR availablePANTHERPTHR47958:SF63DEAD-BOX ATP-DEPENDENT RNA HELICASE 22coord: 127..562
NoneNo IPR availableCDDcd00268DEADccoord: 143..384
e-value: 8.49206E-48
score: 163.767
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 409..543
e-value: 5.40812E-41
score: 143.032

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig643contigP-littoralis_Contig643:98173..110266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig643.20.2mRNA_P-littoralis_Contig643.20.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig643 97841..110266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig643.20.2 ID=prot_P-littoralis_Contig643.20.2|Name=mRNA_P-littoralis_Contig643.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp
MSSLCHASTARSISNSSSSSSSNESRRHHHQRRQQGLQQRGHSVSLRLKS
TAGESGGEGKGFWTDDAGGFEEPPSFLESSGRGDAASRPWEEPAAADAAE
AGFLQEEDDEAEWMAGQEVDPEAEAIFFGDRVPFSDLGLSPALCGHLEAL
GIGHSTAVQAAAVPGILSGEDLIVGAETGSGKTLAYLLPIVERVLRGHAI
AKGLPNELLGNARGWPMFPDVIVLVPNKELCEQVHSVLKGILKALDADGN
TDVTAAAMYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKAT
TLVMDEADMLMEGSYKKQLDDILVAFRRADRVQVEEESLVDGQIKMRGID
KTQYVLAAATLPTYGLKSVDQYIKRAFPEARKIQQVHMHRHHPAIQQAST
PGKACAGERQEFVEVGGQVFDKIQAVIDLLRESGSETDTSRTMVFTNTAA
SCKRAYEALSEEGFSVVPYHKETVPLERLANLHALRSGRAKILVCTDLAA
RGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDSTKDL
VNSIMEAGEGSRLDGSFSRQRGFRKKFKKYGPSRTFQGERSPRARR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase