mRNA_P-littoralis_Contig643.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE) HSP 1 Score: 473 bits (1218), Expect = 2.290e-155 Identity = 276/325 (84.92%), Postives = 295/325 (90.77%), Query Frame = 3
Query: 66 MGPFRSTPVAVVSALALAASSTPS-GVA-----FVVPPSASTIARSSQGAGIVSAQSPARGVTSWRSARRPSTTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGELTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQLTSSSPAVESELDQMKRDM 1022
MGPFRSTPVAV +ALALAASS+PS G+ FVVPPSASTIARS+ GAGIVSAQS R SWR++ PST +LQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRM+RQKQEADRLA NWYDRAQLALQNGDE+LAREALARRQQQLDTSGS+G QM Q ALDKLRDSMQQLE+KITEAKGQK+TLIARARTAKTTTQVNDMLGSITG+TSMDAFDRM EKVESLEA AEI+GEL+GSTSVSLEG+FKALEG N+VD+ELAKMKG LP K GPTPQL SSSPAVESELDQMKR+M
Sbjct: 1 MGPFRSTPVAVAAALALAASSSPSSGIVTLVGGFVVPPSASTIARSTPGAGIVSAQSHVRRSPSWRTSGGPST-ALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVESLEANAEIAGELSGSTSVSLEGQFKALEGSNAVDNELAKMKGLLPSKKGPTPQLPSSSPAVESELDQMKREM 324
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA) HSP 1 Score: 287 bits (734), Expect = 6.440e-85 Identity = 161/261 (61.69%), Postives = 211/261 (80.84%), Query Frame = 3
Query: 255 RPSTTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGELTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPM-----KGGPTPQLTSSSPAVESELDQMKRDM 1022
R T ++QMNLADRF RV KANLN++LQ EDPEKILEQAVEDMQKDL+KIRQSYAEVSATQKRM+RQK++A+ L++ WY RAQLAL GDE+LAREAL+RRQQQ++ S+G+QMT+Q GA+D+L +SMQQLE+KI+EAK +KD +IARARTAKT+ +VNDML S++G++SMDAF+RM+EKVE LE+ AE++G+L G + SLEGKFK L ++VDDEL+KMKG + G P + + V+SEL+ ++++M
Sbjct: 50 RTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAE--VDSELEALRKEM 308
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.770e-82 Identity = 157/264 (59.47%), Postives = 204/264 (77.27%), Query Frame = 3
Query: 231 VTSWRSARRPSTTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGELTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQLTSSSPAVESELDQMKRDM 1022
V ++R+A ++ QMNLADRF+RVAKANLN++LQ EDPEK+LEQAV+DMQ+DLVK+RQSYAEVSATQKRM+RQ+ EA+R+A WY RAQLAL+ GDE LAREALARRQ Q+D ++G QM Q ALD+LR MQ LE+KITEAKG+KD LIARAR+AKTT VNDML ++TGS+ M+AF+RMQ+KVE+LE+ AE+S +L+G+ SLE +F ALEG +VD ELA ++ LP + + ++ EL Q+KR++
Sbjct: 38 VVAYRAASPVHLSTTQMNLADRFMRVAKANLNSLLQKVEDPEKVLEQAVDDMQRDLVKVRQSYAEVSATQKRMERQRAEANRIAEEWYKRAQLALEKGDEGLAREALARRQTQVDIVATVGAQMDTQQQALDQLRSGMQALEAKITEAKGKKDALIARARSAKTTQNVNDMLNNVTGSSGMEAFERMQQKVEALESTAEVSAQLSGTAGGSLEQQFAALEGSTAVDKELAALRASLPGSSSSPSRALPEAGKLDDELAQLKREL 301
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A7S1D0V6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0V6_CYCTE) HSP 1 Score: 270 bits (689), Expect = 1.850e-78 Identity = 161/273 (58.97%), Postives = 203/273 (74.36%), Query Frame = 3
Query: 243 RSARRPSTTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGE--------LTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTP------QLTSSSPAVESELDQMKRD 1019
R A +TT+L MN+ DRF RVAKAN+NNIL+ EDPEKIL QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA +WY RAQLAL+ G+EDLAREAL+RRQQQLD S ++ QQ+ Q ++DKL + MQ LE+KI E+K +KD +IARARTAK+T QVNDMLG ITG TSMDAF RM++KVE+LEA AEIS E L GS+ SLE +F+ LE +SVDDEL+K+KG L GG T AV+ EL+++KRD
Sbjct: 46 RRAATATTTALNMNIFDRFSRVAKANINNILKNLEDPEKILNQALEDMQGDLVKVRQSYAEITATQRRLLKQKEQADSLAQDWYQRAQLALEKGNEDLAREALSRRQQQLDASANLQQQIDTQGASIDKLYEGMQALETKIIESKAKKDQMIARARTAKSTQQVNDMLGGITGKTSMDAFSRMEDKVEALEAAAEISSEMGTLDGRALPGSSESSLENQFRMLEASSSVDDELSKLKGLL---GGSTEGXXXXXXXXXXXXAVDDELERLKRD 315
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A8J2SJN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA) HSP 1 Score: 268 bits (686), Expect = 2.060e-78 Identity = 159/269 (59.11%), Postives = 201/269 (74.72%), Query Frame = 3
Query: 243 RSARRPSTT------SLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGELT-GSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGG-PTPQLTSSSPAVESELDQMKRDME 1025
++AR PSTT +LQMN DRF RVA+AN+NN+L EDPEK+L QAVED+QKDLV IRQSYAEV ATQKR RQK +AD+LA WY RAQLAL+ GD++LAREAL+R+QQQ+D S S+ +Q+ +Q +L KL DSM LESKI+EA+ KD IARARTAKT T+VNDML S++G+TSMDAF+RM+EKVE LE AE+SG+L G+ + +E +FK LE +SVDDEL+KMK QL P + PAVE EL ++K +M+
Sbjct: 21 KTARLPSTTRARPTTALQMNFFDRFKRVAEANINNVLGKMEDPEKVLNQAVEDLQKDLVTIRQSYAEVMATQKRQQRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQVDASTSLDEQIAIQSDSLSKLYDSMTALESKISEARSMKDQYIARARTAKTATKVNDMLSSVSGTTSMDAFERMKEKVEMLETQAEVSGQLQFGAGTADMESRFKELEAGSSVDDELSKMKRQLTAGSDEPAKPAAPADPAVEDELAKLKGEMK 289
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A7S3K4X7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4X7_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.180e-77 Identity = 155/254 (61.02%), Postives = 190/254 (74.80%), Query Frame = 3
Query: 273 LQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGELTGSTSVSL--EGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQLTSSSPAVESELDQMKRDMES 1028
+ MN+ DRF RVAKAN+NN+L WEDPEK+L QAVED+QKDLVKIRQSYAEV ATQKRM RQK +A+ LA WY RAQLAL++ DE+LAREAL+R+QQQ D S+ Q+ +Q +L+KL DSMQ LE+KI EAK KD IARARTAKT T+VNDML S+TGSTSMDAF+RM+EKVE LE AE++GELT T+ S+ E KF+ LE + VDDEL++MK L P+ + PAVE EL ++K S
Sbjct: 48 VSMNIFDRFSRVAKANINNVLNKWEDPEKVLNQAVEDLQKDLVKIRQSYAEVMATQKRMQRQKDQAENLANEWYRRAQLALESDDEELAREALSRKQQQDDQISSLDDQIRLQSESLNKLYDSMQTLENKIAEAKSTKDQYIARARTAKTATKVNDMLSSVTGSTSMDAFERMKEKVEMLETEAEVAGELTQGTASSIDSETKFRQLEMGSKVDDELSRMKRALNAGNENAPKALPADPAVEDELSKLKEKQAS 301
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A7S1TUY4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUY4_9STRA) HSP 1 Score: 263 bits (673), Expect = 9.150e-76 Identity = 151/251 (60.16%), Postives = 192/251 (76.49%), Query Frame = 3
Query: 267 TSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSI-TGSTSMDAFDRMQEKVESLEAGAEISGELTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQLTSSSPAVESELDQMKR 1016
T+++MNL RFLRVAKANLN+++ WEDPEK+L+Q VE+M +DLVK+RQSYAEVSATQKR+++Q+++A LA WY RAQLAL GDE+LAREAL RRQQQ+DT ++ Q+ Q ++ +L D+M LE++I EAK KD L+ARARTAKT +VNDMLG++ GS SM AFDRM EKV++LEA AEI+GEL G++ SLE KFKALEG N VDDELAK+KG L P + P VE EL++MKR
Sbjct: 101 TAVEMNLGGRFLRVAKANLNSLISRWEDPEKVLDQTVEEMNRDLVKVRQSYAEVSATQKRLEKQREQAGALAEEWYKRAQLALSKGDEELAREALTRRQQQVDTEEALAGQIEGQAESVARLYDAMGALEARINEAKATKDQLVARARTAKTANKVNDMLGAVGDGSNSMSAFDRMAEKVDALEAEAEITGELAGTSGGSLEQKFKALEGGNKVDDELAKLKGTLGGSADP-----KALPGVEDELEKMKR 346
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A7S1YG23_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YG23_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.080e-75 Identity = 148/257 (57.59%), Postives = 198/257 (77.04%), Query Frame = 3
Query: 261 STTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGE----LTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQLTSSSPAVESELDQMKRD 1019
ST SLQMNL DRF RVAK+N+NN+L+ EDPEKI+ QAVEDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA +WY RAQLAL+ G++ LA+EAL RRQ+ LD S + +Q+ VQ ++DKL + MQ LE+KI E+K +K+ ++ARARTA++T +VNDMLG ITG TSMDAF+RM+EKVESLEA AE+SGE L GS + +E +F+ LEG +V+DE K+K GP T++S AV+ EL+Q+K+D
Sbjct: 41 STVSLQMNLFDRFTRVAKSNINNLLKNLEDPEKIMNQAVEDMQSDLVKVRQSYAEITATQRRLLKQKEQADALAADWYKRAQLALEKGNDPLAKEALTRRQKSLDQSQGLQEQIDVQAASIDKLYEGMQTLEAKILESKAKKEQMVARARTAQSTQKVNDMLGGITGKTSMDAFNRMEEKVESLEAAAEVSGEMVEALPGSPAGLIEQEFRMLEGSAAVEDEFQKLKAL-----GPGKDTTTTSSAVDDELEQLKKD 292
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: B7FWP5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWP5_PHATC) HSP 1 Score: 260 bits (664), Expect = 6.150e-75 Identity = 154/267 (57.68%), Postives = 201/267 (75.28%), Query Frame = 3
Query: 261 STTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGE--------LTGSTSVSLEGKFKALEGKNSVDDELAKMKGQL--PMKGGPTPQLTSSS----PAVESELDQMKRD 1019
S+++L MNL DRF RVAK+NLNNILQ EDPEKI+ QAVEDMQ DLVK+RQSYAEV+ATQ+R+ +QK++A+ ++ +WY RAQLALQ G+E+LAREAL+RRQQ D + ++ QQ+ +Q ++DKL + MQ LE KI E+K +KD ++ARARTA++T +VNDMLG +TG TSMDAF RM+EKVE+LEA A++S E L GS + SLE +FKALE +SVDDEL KMKG L G + + SS PAV+ EL +MK+D
Sbjct: 50 SSSTLHMNLFDRFQRVAKSNLNNILQNLEDPEKIMNQAVEDMQADLVKVRQSYAEVTATQRRLLKQKEQAEAVSNDWYKRAQLALQAGNEELAREALSRRQQTADEASNLQQQIDLQAASIDKLYEGMQVLEKKILESKSKKDQMVARARTAQSTQKVNDMLGGVTGKTSMDAFSRMEEKVEALEAAADVSAEMGALGANALPGSAASSLEQQFKALESSSSVDDELKKMKGLLGGAKDSGDKKETSGSSAGADPAVDDELAKMKKD 316
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Match: A0A7S2UHG5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHG5_9STRA) HSP 1 Score: 258 bits (658), Expect = 3.510e-74 Identity = 150/268 (55.97%), Postives = 198/268 (73.88%), Query Frame = 3
Query: 261 STTSLQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLATNWYDRAQLALQNGDEDLAREALARRQQQLDTSGSIGQQMTVQDGALDKLRDSMQQLESKITEAKGQKDTLIARARTAKTTTQVNDMLGSITGSTSMDAFDRMQEKVESLEAGAEISGE------LTGSTSVSLEGKFKALEGKNSVDDELAKMKGQLPMKGGPTPQ---------LTSSSPAVESELDQMKRD 1019
+T +QMNL DRF RVAK+N+NN+L+ EDPEKI+ QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA +WY+RAQLALQ+G+E+LAREAL+RRQ Q +T+ + Q+ Q A+DKL + MQQLES+I E+K +KD ++ARARTA++T +VNDMLG ITG TSMDAF RM++KVE+LEA AE+S E L GS S+E +F LE +SVDDEL +MKG L GG T SS P ++ EL Q+K+D
Sbjct: 46 ATNMMQMNLFDRFSRVAKSNINNVLKNLEDPEKIMNQALEDMQGDLVKVRQSYAEITATQRRLLKQKEQADALAKDWYNRAQLALQSGNEELAREALSRRQAQTETADGLKSQIDQQGAAIDKLYEGMQQLESRILESKAKKDQMVARARTAQSTQKVNDMLGGITGKTSMDAFTRMEDKVEALEAAAEVSAEMGTGKALPGSAESSIEKQFAQLEASSSVDDELKRMKGLL---GGSTDSGSXXXXXXXXXSSDPGIDDELAQLKKD 310 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig643.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig643.8.1 >prot_P-littoralis_Contig643.8.1 ID=prot_P-littoralis_Contig643.8.1|Name=mRNA_P-littoralis_Contig643.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=326bp MGPFRSTPVAVVSALALAASSTPSGVAFVVPPSASTIARSSQGAGIVSAQback to top mRNA from alignment at P-littoralis_Contig643:41572..49482- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig643.8.1 ID=mRNA_P-littoralis_Contig643.8.1|Name=mRNA_P-littoralis_Contig643.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7911bp|location=Sequence derived from alignment at P-littoralis_Contig643:41572..49482- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig643:41572..49482- >mRNA_P-littoralis_Contig643.8.1 ID=mRNA_P-littoralis_Contig643.8.1|Name=mRNA_P-littoralis_Contig643.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=978bp|location=Sequence derived from alignment at P-littoralis_Contig643:41572..49482- (Pylaiella littoralis U1_48)back to top |