prot_P-littoralis_Contig643.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig643.7.1
Unique Nameprot_P-littoralis_Contig643.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length514
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig643.7.1 vs. uniprot
Match: A0A6H5KEE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.470e-7
Identity = 155/270 (57.41%), Postives = 172/270 (63.70%), Query Frame = 0 
Query:    1 MPRSKCPHEGCGKEPSFGQPGSRTAQFCALHAEDGMVNVRGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGGTAEKNTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTRNREFCARHAPPGMIILGKAGKPKEVPADRKRKSSPVSDXXXXXXXXXXXRK-----------SSNETPMDWSVLQSAAAAAYIGKMIP 259
            MPR+KCP +GCGKEPSFG  G+R+A++C +HA+   VNVR  R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  XX      +  T  XXXXXXXXXXXXXXXXXXXXXXX        GV G R+ XXXXXXXXXXXXXXXXXXXXXXXXX         GTR  E+CA+HA PGMI L  +   KE              XXXXXXXXXXX             +++  PMDWS LQSAAAAAYI KM+P
Sbjct:    1 MPRTKCPVQGCGKEPSFGVAGTRSAKWCRVHADPSHVNVRANRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVDVSIRTCAQEGCPKRAXXXXXXMDDSKTAPXXXXXXXXXXXXXXXXXXXXXXXTVRNPRF-GVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXXPKQPSFGVPGTRKAEYCAKHAAPGMICLRTSKSKKEAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAASAVPMDWSALQSAAAAAYISKMVP 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig643.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KEE1_9PHAE1.470e-757.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 165..197
e-value: 1.2E-7
score: 32.2
coord: 44..77
e-value: 1.2E-6
score: 29.0
coord: 6..40
e-value: 7.3E-9
score: 36.0
coord: 126..160
e-value: 3.3E-6
score: 27.6
coord: 82..122
e-value: 2.6E-7
score: 31.1
NoneNo IPR availableGENE3D6.10.140.110coord: 21..63
e-value: 1.9E-6
score: 30.0
coord: 142..198
e-value: 5.8E-10
score: 41.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig643contigP-littoralis_Contig643:33947..38876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig643.7.1mRNA_P-littoralis_Contig643.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig643 33826..40542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig643.7.1 ID=prot_P-littoralis_Contig643.7.1|Name=mRNA_P-littoralis_Contig643.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp
MPRSKCPHEGCGKEPSFGQPGSRTAQFCALHAEDGMVNVRGKRCEHPDCN
TRPAFGVPFTKKVQFCRPHATEGMVDVSTKSCGHHGCFKRPTFGPVGGTA
EKNTKNGQFCAQHALEGMIDVVSKRCIHPGCPTKRSFGVGGHRKNAQYCG
KHATAGMVDVISKKCAHPGCAKHPSFGLEGTRNREFCARHAPPGMIILGK
AGKPKEVPADRKRKSSPVSDDGGGTSTRRPRRKSSNETPMDWSVLQSAAA
AAYIGKMIPPVPAAVVPPTIPTPEVAMVSAATPVMPPPMPMGAPTSPTGN
GTSLQQREQSQTQQHQLAQPQRQPQSEPMPKPQAQPQPQPQAQAQAQAQP
PPQPQPQAQPQPHPQVQPQVQPQSQPQPQSQPQPQQRTAQPQPQSQPQPR
PQPQPQPQPKQQPAKPQPQPQPQPQQRPAQPQPRPQPQPQPQPQPQSQQQ
PAKPQVQPQVQPQVQPQPQPQQQPEQPQPKHRPQQQPEQPQAQPKLEMSP
QPQPQPQPKSTPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys