mRNA_P-littoralis_Contig642.5.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig642.5.2
Unique Name	mRNA_P-littoralis_Contig642.5.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 5.040e-23
Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 1

Query:  637 MDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCARENDYPWDGMTC 936
            +++ +  NV + +YL EFV D Q+L+FASVSRGWRD WG KRP VT A+  DTSV QL  S  CGL RT AVC  ++ LG+LDLLQ AR    PW+  TC
Sbjct:   17 VEDLVTANVYLLSYLAEFVDDNQHLFFASVSRGWRDVWG-KRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMGCPWNENTC 115

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.520e-22
Identity = 58/100 (58.00%), Postives = 68/100 (68.00%), Query Frame = 1

Query:  637 MDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCARENDYPWDGMTC 936
            M+  L   VDI + + EFV D QYL+FASVSRGWRD WG KRP VT A+  DTSVSQL  S  CGL RT AVC  ++ LG+LDLL+ AR    PW+  TC
Sbjct:    1 MEKQLFAAVDIVSTVGEFVDDNQYLFFASVSRGWRDVWG-KRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNENTC 99

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.490e-21
Identity = 54/92 (58.70%), Postives = 63/92 (68.48%), Query Frame = 1

Query:  661 VDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCARENDYPWDGMTC 936
            VDI + + EFV D QYL+FASVSRGWRD WG KRP VT A+  DTSV QL  S  CGL RT AVC  ++ LG+LDLL+ AR     W+  TC
Sbjct:    7 VDIVSTVAEFVDDNQYLFFASVSRGWRDVWG-KRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNENTC 97

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.050e-20
Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 1

Query:  637 MDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRT-TAVCAAISALGKLDLLQCARENDYPWDGMTCSTAA 948
            M NP     D+ ++  EFVHD Q+L+FASVSR WR AW + RP  T A+  DTS SQL  S+ CGL    TAVC AI++LG+LDLL+ AR   + WD MTC  AA
Sbjct:    1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAW-RGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMTCWKAA 104

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.210e-17
Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 1

Query:  637 MDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCARE-NDYPWDGMTCSTAA 948
            M NPL    DI   L+EFV  +QY++FA VSR WRDAW + RP  T A   DT V QL  S  CGL   + VC  I+ALG+LDLL  ARE ++ PWD  TCS A+
Sbjct:    1 MPNPLM-QPDIVFRLMEFVGGEQYIFFAGVSRTWRDAW-EGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCAS 103

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.060e-17
Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 1

Query:  601 GGAQGSLRRYCGMDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTA-VCAAISALGKLDLLQCARENDYPWDGMTCSTAA 948
            GG  G+   + G    LA NVD+   +V FV +KQ+L+FA VSR WR+AWG  RPAVT+ V  D+SVSQL  S   GL R    +CAAI+ LG L+LL+ AR +   W+G+T S AA
Sbjct:   41 GGGDGATDLWRGSGLILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGC-RPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEAA 156

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-16
Identity = 51/90 (56.67%), Postives = 60/90 (66.67%), Query Frame = 1

Query:  682 VEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCAREN-DYPWDGMTCSTAA 948
            +EFV  +QYL+FA VSR WRDAW + RP  T AV  DT V QL  S  CGL R + VC  I+ALG+LDLL  ARE  + PWD  TCS A+
Sbjct:    1 MEFVGGEQYLFFAGVSRTWRDAW-EGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYAS 89

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: D7FWU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU0_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-16
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 1

Query:  637 MDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCARENDYP 918
            M NPL +N  +  +L+E+V   QYL+FA+V RGW  AWG+ RPAVT A    TSVSQL  S  CGL RT  +C   + LG+LDLLQCA  N  P
Sbjct:    5 MLNPLTSNKTVVNHLMEYVDHNQYLFFATVCRGWSRAWGE-RPAVTRAATNGTSVSQLSFSFHCGLRRTKGICETAAKLGRLDLLQCAVLNGCP 97

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BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 5.290e-12
Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 1

Query:  640 DNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQKRPAVTTAVIVDTSVSQLLCSIACGLGRTTAV-CAAISALGKLDLLQCARENDYPWDGMTCSTAA 948
            +N   TN+DI   L +FV DKQ+L+FA+VSR WRDAWG+ R  VT+ V   T+  QL  S ACGL R     C   +  G LDLL+ A E   PW     + AA
Sbjct:   16 ENVAMTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGE-RATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPWTRSLSAAAA 118

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig642.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9


Match Name	E-value	Identity	Description
A0A6H5L0K8_9PHAE	5.040e-23	56.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FMS7_ECTSI	1.520e-22	58.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0J7_9PHAE	1.490e-21	58.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDD9_ECTSI	2.050e-20	53.33	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JM75_9PHAE	1.210e-17	52.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPZ6_9PHAE	2.060e-17	49.57	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7G8W5_ECTSI	1.020e-16	56.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FWU0_ECTSI	1.150e-16	53.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FH49_ECTSI	5.290e-12	46.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig642	contig	P-littoralis_Contig642:8772..20710 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FJY0
PFAMs	Ank_2,Ank_4
Model size	3196
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K06052
KEGG Pathway	ko01522,ko04330,ko04371,ko04658,ko04668,ko05165,ko05200,ko05224,map01522,map04330,map04371,map04658,map04668,map05165,map05200,map05224
Hectar predicted targeting category	signal peptide
Exons	2
Evalue	6.56e-12
EggNOG OGs	2AMK4@1\|root,2RZCC@2759\|Eukaryota
Cds size	1626
BRITE	ko00000,ko00001,ko04090

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791341.1371984-UTR-P-littoralis_Contig642:8771..9882	1680791341.1371984-UTR-P-littoralis_Contig642:8771..9882	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig642 8772..9882 -
1680791341.1698704-UTR-P-littoralis_Contig642:20251..20710	1680791341.1698704-UTR-P-littoralis_Contig642:20251..20710	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig642 20252..20710 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791341.148232-CDS-P-littoralis_Contig642:9882..11355	1680791341.148232-CDS-P-littoralis_Contig642:9882..11355	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig642 9883..11355 -
1680791341.1581137-CDS-P-littoralis_Contig642:20098..20251	1680791341.1581137-CDS-P-littoralis_Contig642:20098..20251	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig642 20099..20251 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig642.5.2	prot_P-littoralis_Contig642.5.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig642 9883..20251 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig642:8772..20710-
coding sequence from alignment at P-littoralis_Contig642:8772..20710-

protein sequence of mRNA_P-littoralis_Contig642.5.2

>prot_P-littoralis_Contig642.5.2 ID=prot_P-littoralis_Contig642.5.2|Name=mRNA_P-littoralis_Contig642.5.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=542bp
MIRRFIFSLYATSPGSGHPPPLLSRGQETPIGADADGKWVRAGDISGGGA
QGSLRRYCGMDNPLATNVDITAYLVEFVHDKQYLYFASVSRGWRDAWGQK
RPAVTTAVIVDTSVSQLLCSIACGLGRTTAVCAAISALGKLDLLQCAREN
DYPWDGMTCSTAAKGGHIDVLQWARSNGCLWDKRTCSSAADGGHLSVLQW
ARSKGCPWSASTCSCAALGGHIGVLQWARSSGCPWDAETCYSAALGGHLG
VLQWARSNGCPWNIYTPYSAALGGHIGILRWLRSNDCEWGQTLYGAALGG
NLGILQWARANGCPWDTWACYGAAEGGHFGILQWARSNGCPWDSSTCSGA
AREGHLGILQWARSNGCPWDESTCSSAAGGGHLGILQWARSNGCPWDSFI
SNSAAQGGHLGVLQWARSNGCIWGPQTCSSAARLGHLGVLQWARSNSCLW
DETTCSAAARGGHLGVLQWARSNGCPWDEGTCSAAAIGGHLGVLRWARSN
GCPWDETTCSAAANGGHLSVLQWAQSNGCPWDEGTCSAAAI*

mRNA from alignment at P-littoralis_Contig642:8772..20710-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig642.5.2 ID=mRNA_P-littoralis_Contig642.5.2|Name=mRNA_P-littoralis_Contig642.5.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11939bp|location=Sequence derived from alignment at P-littoralis_Contig642:8772..20710- (Pylaiella littoralis U1_48)
ACACCCAGACACCGAGCATGAAGACGCGCAGGCAAGACGGAGCTACCCTG
GACAGTACAGCTGCCGATGGCTCAATCGATGAGGTGAGGTAGGATCAGGT
AGCATCAGACAGCGTTCAACGTCCAGGCACGCCGCGGTTTGGAGCTGACC
GAGCAACCCTCAAGCAGTGTCGTACAAAGCAGCAGTTATGTCAGGAGGTC
AGGAGCTACAATACTGCTGTACCTCAGAGATGAACACAGCGCTAATGTTT
CCTCTACAACAGTAGCATGTACGGCTGACGACTGCATCCCACCCGATCGA
TAGTTGGCAAGGTGATTGACCTGGCTGCGTTCCGTATCATATGATCCGTC
GTTTGGTTTCCGTTCATTGCCTTCAAACTTCAAACCCCAAGAGTATCCTC
TTATTTCTCTTTGTTGAATTTTGAAAATAAAGTGTTGGCCGCTACCAAAG
CAGCATGTCATGATCCGTCGGTTTATTTTTTCATTATATGCCACATCGCC
GGGATCGGGTCACCCTCCTCCTCTCTTGTCGAGGGGACAGGAAACTCCGA
TCGGGGCTGATGCTGACGGCAAATGGGTTCGTGCCGGGGACATCAGCGGC
GGTGGTGCACAGGTGAGATGTTTGCAAAAATGTTTCTTTGATTTCCCGCG
ACAGATGCAACGAAGTTAAAAACGAAAGTATTTTTAAGGCTCCAGGGACG
ATGGAATGTTGACAGGCACAGATTTTCAAGAACAGCGAAGGGTCCCTGAC
AATCACACACTGGGTACCTCACACCAGTAGGGAGGCGTTAGGAAAGACAG
AAACTGTTGGTCATCGCACACAGCAGCAGTGGGGGCTTCTCTCCACATGC
TTATCACATGTCTACCTCCAATCTCCCTCATAAATATCAAGATACATTTT
TAACAAGTTTAAAATCAAGTCAAAGTAGCTTATTTTGGTAAGGCTCTTAA
CAAGCTCAGTTGTGCTAGGAGTATTCCCTTAAGATTTTCAATCAGTAAAG
GATACGATGGAGCAGCTACGTGCGTGTCGGCACGTTCAGACATGCTGCTG
GGGCCGAGATATCGAAGGCTGCAGCAGTGTGGGTCAAAAAGTCGGCAAAC
TGCGGCCGAACTGGACCGACACCAAAAGCTTGCCACTGCTATCATCGCCG
CCACACACCCCAACCACCTGAACCGCGGGTCTACAGCAATAGTTGGGGCT
CTAGCTGTCTCGGATGACCTGTAGATTAGGTGGCTGGGGTCCATGGCGGC
GAGCGCAGCAGTGACAAACCTTTGGTGTCGGTCCAGTTCAGGCCCAGTTT
GCGGACATTTTTAGTTTTTGCTCCAGCCTTTGATATCTCAGCCCCAGCAG
CATGTCTGAACCTGCTGACACACACATAGCTGACACACACGTAGCTGCTC
CATAGTACCCTCTGCTGATAGAAGTACATCAGGTAAATACTCCTTGCACA
GCTGACAGGGTGAGAGGTTAAGCCGATTAAGCTCTTTTGACTTGATTAAA
GACTGAAATCTATCCTCTGGATCCAAAATAAGATTTTTCGGTAAGGATTT
TTTTACCGCCCTTGTCAGTGGTTCCTTAATAGAACCTATTCAGCATGTTT
GTCTGCCAGTTGGTCTCTCATGGGCATAGAGCGACTTTTTTTTTGGTTTG
ACACCGCCGTTTTTTTTTTTTTCGATTTTTCGCCTGCGCCTGCGGCAAGA
GCTCGATCTGTGCTGCTGCCCTGTCGAATTTCGCGGTTTATCGTGCCGTT
TGTCTCGAGCTGCGGTCTCAGCCCCGTGCACCGTCGCCCCGAGACGGCAG
TTATGCCGCATCCTGCCGCCCCGAGGCGCCCGTCGTGCCGCATATTGCTT
ACGATCGTCGCTTTTGTCAACCACCGCTTGATTTATTGCTTTTGTTTTAC
CGTTCCCGCCTATTCGCTGTGAGTGTACCGACTGATCGGCGACGGATTCT
TCTCTGTGATGATGTGCATCTGTTGCTCGCCTGTTTTTCTTCGTTGTCTC
CCTTTTCTTTTTCGCTTCACGTCCTCGGAAAACACATGTGATTTTTAAAG
CGGGCGCTACAGCGTAGTACGTACGTGCTCGGCTCTCACCGCCGCTGCTG
AAGAGCTGGGGTCTAGTTCCTTTGTCGCTTCACCTCCTCACAAAACATAT
GTACATACGTACATCACAAGTATTTAGGGCAGTGTGCTGTAAAAGGTGTA
TAGCTATGTATCATGTACTGAGAGACGCGACTGACGAAGAGCTGGAGTCT
GCTGCTCTCTGTCTCTTCACAAAATGCATATTACTTCGAAGTACGAACAC
AAAAACTTTCCGATATTCAGGTCGTTCAATGTTCAGGCCAGTTGCTGTGA
GAGCTGACTGTGAGAGAGCTGCGTGTCTGACACTGGACAGGCTGTTCATC
ATCCTGAACAGTATCCAAAAACGCCATTCAATACAAACACGCCCGGTTGG
ACGCCGCTGCAGTAAAGACCGGCCGCCAGAACGAAAGCCAAGACAGCTGT
GGTGGCCTTTTTCCTTTTATACTGCCGTAACAGATTCATTTGCGGCTGGA
CTGTTTTCTGCTCAGGCAGCTGTTTAGTAGTCAGTGCACATTTGTTTGAG
CTGCCACGCGAGCCCGTGTCGGCACGCAATGTGATTGGTCGAATCAGCCC
GTCATCATCCGATGGGCGCTAAGTAAACACACCTGTTCGCCTGTTGCTTT
CGTGTGGCTTCCGACAAATGGCAACCCACGGCTGGCTCCCTCCACGCAGT
CACTGCAATCAGTCAGAGCAGCGCAGGCGCAGAGCAACATACACCACACG
CCCAATGCCACCATTAAGTTCGTTGAAGAAGAGCCAAAACACATCATACA
CACAGCATACCCATTCACTGCTGCTGTACATGAACCAACCCAAGATGTTT
TAGTTCCTCTAGCAGCAGCCATAGCTGTTTGTGAGTGTTTGCGTGTCTTA
GCTCGTCCATTAACACAGCTGTGGGTGTCTTGTGCGTGTGGTGTGTTTTG
GTTCTTCTACGTGTAACGGCAGCAGCAGCAGCTGACGTTTTTTTGTTGTT
TGTCTTCTCTGTTGCTCTATGTGACAGCAGTCCGCAGCTCCTTCGCCTGA
TCCGGCACGCTTCACCAATTCTACAGCAATGAACAACCGAGATAATCGTG
TTGGCTCTTCTACAGCAGCAGTGTGTGCACTGTGTGTCTAGGTGTGTGTT
GTCTGACAGCACCAGCAGTCAAGTGTGGGTGATGATGCGAACTATCTGAA
GGTATGATACCTTCGTCTTTTCAACATTCGGCACCCAGACTACAATCCCT
TTTGCGCAAACTCTTGTTGTTTTTTTTCAAACAATTTCGTGTGAAAATAA
TGTTTTTTCACAAGAAAATCGAAGGAAATAAATAATTTTGCGCAAATCTC
CGCTTTCGCTGTACTTCGTATATTGTTGCTTGTCTGTGGTATCTGGGATG
AATGGCAAGGTCTGGATATAATTTCCCTTTAGACTCGCGTGCAGTAGAGA
ACCGTGACCGGTGTTTACATTTGTCTTGAATCACTTGCTCCCTCTGGCCA
AGTTCACGCATTTACCTTCTCCGTAGAGGGCTTTTGCATAATATCAGACT
TTCCTCACTACTATGCGACAACCACTGTACATTGCATGTTGCTATCTTCT
GCCGGGTGTGCTGTATGTTCACAGTAGCAGCAATAACTGCACTGCCGAAG
AGGGTCGGCTGCTCTCAATCAACCTCAGATCTGTTTTCGCAGACATGCAT
CAAGACACGCTTGCGAATTTTGTCAACGTTTGTTTTGTTTGCCCACTCAC
AATCCTAATCCGCTCCAGATTTGTATTTAGCTCAGCGGTGGTGTAAACTT
TGTCTCATGCTGAGTGGCGCCGTTGCCTCACTGCTGTGTGGCGACATACT
AAAGTCAGAGCAGTGTTTGACTTCTGAGTGAATACACTTTGTGTTTAGTT
CCAGGTCACCGCTGCAAACAAATCACATTCCAATGTTTTTATTCGTGCCC
CGGGCGAGCAAATATTTTCCACTTTGTTTTTATTCGTGCCCCGGGCGAGC
AAATATTTTCCAGCCCGACGCGCCTGTCGCGTGCTCGATTCTCGACGTGC
GAGCCGAGTTACAGCCCCGTGAAAGCATGTGCCAAAATTCCCGGCGCTAA
GACTGGACGCGTGCGTGCGTGTGTTATCGCTTTGGTCTCTGAAGGTTTGC
CGGCTTTTGTTTCTTGTTTCCCCGGCGCTGAAACCAGATGCGTTACCTCC
AATGAGCAATGAAGTATCTGGATCTTGTCTTTTCCCTCTCTCCGGAGGCA
AGTTGATTATGAAAATATGTGTACTTATACGAGTGTTATTTGAACGCTTT
GAGATCTCTTTTTTATATTTCTTTTGTCGTGATGCATGTATGCATGCATG
TATGCCGGCTCTAAATCCAGTTTGAGTTGCTGATTCGTCCCAAATCAAAT
TTGCTCCGCAGGTCCTTCATGTTGCTTCGTCTGCACATGCTGTGCACCCT
TTGGTGTGCAGTTTTACACCTTTCGCCTTTAACCCAAACTATTCTTCCCG
CCCTCCTTAGAGGACGGGAGATCCGTCAGGCCCTCTCGTTCGGAACCCTG
GAATTATATACTTCCAAGTAGGCCCTAATACTCCGTATGATACTTCGTAT
GTAATGTGTACTTTGTGGCAATGGAAAAGGTCAACACAGGGAATTTGTCG
GTCACTTCTTTTCTCCACCTTCCTTCTACGGTGCTTGCCTTCGATTGTAC
TGCGAGAAAGATTTTACTGGCCCTTTCTACGTTGAGTTTGGAGTCGAGCT
TTGTTTTCCAGCGGAATGGTCGCTGTCTGCCCCGAGGGTTTCTGCGAGGA
TGACAATCAGTTCAACGGGTTCAACTTCAAGCCCTTGCCACAGGCTGCTT
CAGATTGAGCGCATCAGCAGCGATTTTTCACGCGGTTTTTACGAGTCAGA
TCCTCCAATTTTACTGCATATCCTGCTGTATGTGCGTACGCAACTGTGGA
TGATGACTGTTTGTTTCTTTTGCCGAAAGATTTCCAGAAATCGACGTTTT
TCGGGGCGGTCTGGGTCGACTGGGACCCCAGATGTCTGGTGAACAATACA
CCAACAACCGACAGAGCTCAAACGTCCAAAGCTACTCTTTGACCTATAGT
ATTCGCGTGCATATTTCAGGGTCTAATTCGAAAAAAACGCGTGAAAAACT
ACAGGTGAGTACGGGTATGGGGAAGCACTACACACCCCTGACTTCTCGGC
GTTCGTGTTGAATTAGCTCTTCTCGGGCTTTTAAACGCTACAATTTGCCA
TAAAATTCGTAGATTTGAAAAGATGAAAATTGTGAACATCTTCCTTGGGT
CCCACAGTGACCATTCAGGATTAAAAATTGATGCACCTCGATTTACCACC
GTAGCAGCAAAGTCGCCACTTCAAACTGCAGCAGCAGCAGCAGCAGTAAC
AGCACTGATAGCACTTACGCCATGCCATGATCTCAGGGGTTTTAGCGTCA
GAGCTTGGATTTGTGTTTGCTCAACAAGTTTGGATGGAAACGAGGAGACA
GGGAGACACCGAACGCAGAAAAAAAACGCCCAACATCCAAACTGCATGAG
TCGGATCGCTGCTTTTCTTTTGAGCTCACGATACCTTTCTTGTCGGGCCA
ACCCGATTTGTACTACACACAATTTTCCAAACCATATTACCCACACTTTC
TGAAATATGATGGGAACATGTGTGGTTGATACTCAATTTATCGTATCCCT
AATGATGCCCCCTTGCTTGAACGAGGGGGTGGATGGGTGCGAAAAGTCGA
TCAATTGGAAGGAATATTGTAGAATGCTACTGCAGTGCTGCGATGTCTTT
AGAGGCGACGCAATAGTCTCTCAGAGGAATCTGTGAGACACAATGATATG
ACGGCCACTCTTGACTCGCATGTCCCCGCTTTTCTGATTCCGTCATCGCT
CTATTAAAGAGCTTCCAAGACGCCTCACAAACCACACATTTGTAAATACT
CCGAACCCTGGTTTATTGTTTTGCTCAAGAAATTGGGCTGATGAACGAAA
ACGACCAGGCGCCGAAAACAATAAAATACCTCATTTAATCTAACATACAT
GAGTCGAGTCATTGACCTCCCCTTGAAGTCACGATTCGTTACTTGTCAGG
CCAACCCGACTCGTACTGCATATCGTATTCTTTTGGGCGGCCCGCTACTC
GGCGGTCTTGTCTTCCACAGCAAGCCTAGTTTCTACTCGCGAGGGCCTTT
GACACCTTACTGGAGCCCTTACCTCCGGCCCCACAAAGGTCACAGGCGAT
GCCGACTTCCTCCTCCGTGCCCTCTTTTTCTGAAGCTCTCTCTGCTGCCT
GGTGGTGTGCCATTGCAGCATTTTAGGAGATCGGGAAGATTCGGTGTGCA
GGGTTGGAGTTGGGAGGCAGGTCCGTCATGATGAAATACTGCCGGTTACC
ATTGTATGTCCACCGTCGGAAAATCTGTACTTGTGATTTGCCCGCAAGAA
CGGGAAGCCAACCCTGCGGGAGAAATTTGGTGGGAGGGCCTAATGCACAA
CAGGGTACATCTCCAAAAACATGACTAACTCTTGAGAAAAGGGGCATCCG
CTGGATATACCCCGCCCCTTTTCCGGTACAGTACCGCATTTCACTACATG
ACCAGGGTATATATATATACCCTGTGGTGCCCTCCCGAAAAAAATACGCT
GCTGCACTAACACGACGACACACGAGTAAATGCCTCTTTGTCCTCTTGAG
CAGAGACAAAAAGCGGGCAAACTGTATGCGAGTCGGTACGATTTTCGGGT
CGGTGGAACGTGCGCTTTCCGAATTGAGAACAGCAGCAGCAGCAGCAGCA
GCAGCAGGCTCCCGTAGAAAGCAGCTGGGCGGGTAGGACTAGGGCGCCCT
ACAAAACTACAAGACACAGTAGTGCACTGGTTCCGGCAGTCATTCTTCCA
ATGTTGAGAATACCGCTCAAGTAGAATCTGAAATATAAAGAGGGGGCGAT
AGATACACGTTGCGTGGAATAATTTCGAACATGGCGGCAGCTGCGCCGCT
GTGCGGAACGTCACTGAAGTTGGACTTTTTGTTATTTGACGCATGCAGTA
TAACGTGAGCTCAGGCTCTTTCAAAGCTCATGTCCGCTGCAGTTTGCAAC
CGGTCAGAAGGCAGAGGCGCCCGTCGATGCCCGTGAGAACCATCACAAGT
CTGTCCTACACCAGCGAGAGAGGGCGGGATAATACATGCACCGACGACGC
CCCTGTCGCCACAATCGCTTGTAAAACAGAAGCGCGAGCAGCACACACAC
ACATTCATGTTCAAACAAACCACGACCATTTCACCGAGTGTATCCTCAGG
CCCAAACACTCGCGGTACATGCTCTTCTTTACATGTACGACTGTAACGAA
ACCACCCCTTTTAAGATATCTGTGTGCTTCATGCACCGTTTTTCTACATG
ACTACCGGCAGTATTTTTACATTTTAACAAGAGCAGCAACAGTAGAGAAA
GCGTGGGAGCATTTACCAACCTATCAGCGTTCAGAAGAAGAGTGGGTGCT
CAGCTTTTACCGTGCTGCAGGATGGCACAGGTTTAACTTTGCGTACGTTG
CCATCCTCCGCATCGACATCCGTATGGTATGAGAGCAAACAATTTGCTCG
TAGGTTCCGCAAGCGACGACCGGGCCGCTAGCCCCTTCTCCCTTATGACA
CACAAGCACGTCTACCCTAACCTCACGCGGGCTCTGTTTGAAGCCGGGTT
TACAACTGCAGCTCTTCAGAGGAATCGCTACATCTGCCGTAAATCCAGCA
CGCATCCGAGGCCATCTCAATGCTCGCCTGAAAGGGTTTGCTATTTCATC
GAGAACGAAACAAAATCACAGCAAAGCCCGGCAAAACAATGCAGCGATGG
AAAGTTCAAAACACTCATGTAGCGAAATTTCTGATCGGTATGTGCACAGC
AAGGATGAGCGTGTCTGTTAACACCTGTAATCACATATCGTACGCCGTAT
TTTAATTGAAAACACACAAGCCTGAGGACAAAAAACAGCGCTTCCAGCCC
CAGGCGTTGACCACCTTGACATATTCTCAGACCTTAGCTTGGTCGTCATC
AATTGCTCCGCTGCCCGACAGACCTCCATCCCTGCGTCTCCGTCCTTGTT
GTGCACGACTACCCCCTTCCAGCTCTTTTCTTCCGATCTTCTCCCCGTCC
GCTGGCGAGGAGGGTGGAGCAGGGCCTTTTCGATGCTCTACGAGCCTGAA
TGACGTAACCTGCCATGAACTTGTCCCAAAATGCGTCCGGGAAATGTAAA
AGCTGCTGCTGGCGCGGGCGCTCTGTTGGAATATCCAGTGCTAATCAAAG
TATGTTTCTCCCAGAAACTGCCTTGAACCTACAGCAAGTCAAGTAGGACG
CAGGATCTTTCCCAGACCAGTTGACCAGTTCATTGCATTAGTCACCGGGT
CGTTGAAAATACCGTTGAACGAAGCGTAGAGTTGTAGAACGACGTAGACT
ACAAACGCATAGGCCATGAGTATTTGTAGAACGGACAAGGGTCCCGTAGG
AACCAAACCGTTCATCTATATCTTCTAGCACCGCTTCAGCACCGTTGCTA
TTGATGAACAGGTGATGACTCGCCCTCGTGATGATCGCCCCCTCTCCCAA
CTCACCCAAGTTTTCCTGCCTTCTTGGCCGCATAAGCGCCACTTTTAAAC
TGCTTCTGTCTCTCTGCACAGGCGTACTTTACATGCACTCTGTGAGTCTT
TGCACACTGGCCACAAGACAGTCGCCATGTACTGGATTTCACTAAGGTCC
ACCCTTGGTATTGCAAAAGTCTCAACCTCCGGCAGATCCTTCTCCTATTT
CGGCTTTACCCGACTTGGTCCCGGGAGTGTTGCATATGGTGTCGACAACC
TATTGTTACCATTGTCCTTCGTTGTCGGATAAATAGTCTACCGCGGTCCT
CTGCGCGGTCTTGTTCCAAAACAGACCTCATTGCCCGGCTATCAAGGGCA
GGAGGGCCGTACCTCCTCGCCCGTTGAGTGGACGGGGCGCCGGGCTTGGG
ATGTAACCCAACCGCAATACAGCACTCGGCATTTTTTTCTTATCCGGCGT
ACAGAACACAGAGCATGTATTGCAGTTCTTTCATCAGTGCATTTCCGTAT
TTACACCCCCTCTTGGTGTTCATACCATATCGACGTGGCCAATGATGTGT
ACAAACGTTGTTTGGCTTCACCAAAGGTGTTCTACGCGATACCTTCGTAC
GCCATCATTCGACATTGATGCGCATGTTACCTATCGCCAAGCTTTTGCCC
GTGTTTCCATTACATGAGTCCCTTTCACTGTTGTGGCCTAATTGATTGAA
CGCAGGGTTCGCTTCGGAGATATTGCGGCATGGACAACCCTCTCGCAACT
AACGTCGATATCACCGCATACCTGGTGGAGTTCGTGCACGACAAGCAGTA
CTTGTATTTTGCGTCGGTGTCGAGGGGCTGGAGGGATGCCTGGGGCCAGA
AACGCCCCGCGGTCACCACAGCCGTCATAGTTGACACGTCGGTGTCTCAG
CTGCTGTGCAGCATTGCTTGCGGCTTGGGTCGGACTACCGCTGTGTGCGC
TGCCATATCGGCGCTAGGTAAGCTTGATCTCCTCCAGTGCGCACGAGAGA
ACGATTACCCGTGGGACGGGATGACATGTTCGACCGCGGCGAAAGGCGGC
CACATTGATGTTCTCCAATGGGCACGGTCAAACGGGTGTCTTTGGGATAA
GCGGACCTGTTCAAGTGCTGCCGACGGAGGGCATCTTAGTGTACTTCAAT
GGGCGCGGTCCAAAGGTTGTCCGTGGAGTGCATCCACGTGTTCCTGTGCT
GCCCTCGGAGGGCATATCGGCGTTCTCCAGTGGGCGCGGTCGAGCGGCTG
TCCATGGGATGCGGAAACCTGCTATTCTGCTGCCCTCGGGGGGCATCTCG
GCGTTCTCCAGTGGGCGCGGTCCAACGGTTGTCCTTGGAACATATACACA
CCCTACAGTGCTGCCCTAGGGGGGCACATCGGTATTCTTCGTTGGCTGCG
GTCCAACGATTGCGAATGGGGTCAAACGCTCTACGGCGCTGCCCTAGGGG
GGAACCTTGGCATTCTCCAGTGGGCACGGGCCAATGGTTGTCCGTGGGAC
ACGTGGGCATGCTACGGTGCTGCTGAAGGCGGGCATTTCGGCATTCTCCA
GTGGGCGCGGTCCAACGGATGTCCATGGGACAGCAGCACGTGCTCCGGTG
CTGCCAGGGAGGGGCATCTCGGCATTCTCCAGTGGGCGCGGTCTAACGGT
TGTCCTTGGGATGAAAGTACGTGTTCCAGCGCAGCCGGAGGAGGCCATCT
CGGCATTCTCCAGTGGGCGCGGTCCAACGGTTGTCCATGGGACAGTTTCA
TTAGCAACAGTGCCGCCCAAGGGGGGCATCTCGGCGTTCTGCAGTGGGCG
CGGTCCAACGGCTGCATTTGGGGTCCTCAGACGTGCTCCAGTGCGGCCAG
GCTGGGGCATCTCGGCGTTCTGCAGTGGGCGCGGTCCAACAGCTGTCTTT
GGGATGAAACGACGTGCTCAGCGGCTGCCAGAGGAGGGCATCTGGGCGTT
CTGCAGTGGGCGCGGTCCAACGGCTGTCCTTGGGATGAAGGAACATGCTC
AGCGGCTGCCATAGGGGGGCATCTCGGCGTTCTGCGATGGGCGCGGTCTA
ACGGCTGTCCTTGGGATGAAACGACGTGCTCAGCGGCTGCCAATGGAGGG
CATCTGAGCGTTCTCCAGTGGGCGCAGTCCAACGGTTGTCCTTGGGATGA
AGGAACGTGCTCAGCGGCTGCCATATAGGGGTATCTTGGCGTTCTGCAGT
GAGCGCGGTCCAACAACTGCCCTTGGGATGAAACGATGTGCTCAAATGCT
GCAAGAGAGGGGCATCTCGGCGTTGTGGAGTGGGCGCAGTCCAACGGCTG
CCCATAGCACGTACCATGCATGCACTACTGGTTTAGTGCTGACAAAGGGG
CGTGCCTCAGCGTCCCCCAGTGGGCGCGATCTAAGGGCGGCTTGTCTTTG
GAATGCGAGCACGCGCTCCAGCGGTGTCGCAGAGGGCATCTTGGCGTTGT
TCAGTGGGCGCGTCCAAAAGATCGTCCGTGAGATGTGCGCAGGTGCTTGG
CTGCCGCCACAGGAGGACCCCTGGCGCTCCCCGGTGGGTGCGGTCCAACG
GCTGCCCTTGGAATACATCAGCTACTTAGGTCTGCGAAGGCGCAGGCTAC
CAAGTGGTGGTAGCATGCGCCGTCTTTCACGGGTACCCCGTCCGCGGTCC
CGATGTCGTTTACTGAACCGTACCGCTTCAGAAGTAATACTATCTGTAGG
CTGATGTGCGCTGTTGACTTAGATTGGTGGTTGATGGTATCGCATTTGAA
TTATCGCAGGCGGAGACGTGACTTTATGCTTTTTCATCGGGCGATAGACA
ACCATCCTAGAGTACCGAGGAAGAACAGACGAACACATGAGGGCGTTGTG
CCTTGCTCTGCGTTTCCTGAGGCGAGACGCACGGCAAACACGATTGAAGT
TGTTCTGCCGACGACTGTTGTGGCGTTTAAGCCGCCGCAAAGGGCTCACT
TTTGACCCGCGGTAACTTGCATCAAGACGAGCTTCCTGCCGAAAGGCTCT
AGCGGAGGTCTCCATTCTCATGTTGGTTGAAGGCGCAGGTCCAAGAGGTA
GAGCGAAGGTTCATGGGCAGACCCGACGGCCGTAGACGAGCAGTCAGCCT
CATGTAGCCGAAATATTTGTTCAATCTTCAACGAAGACCAGAGTCGACGC
TTATCCACTCCACGCACGGCCGTTGAAATTTCTGGTGAATGACCCAAATA
ATGGTTTGAAGGTTTCTAGAGGATGTTGCGTTCGAGGTTCGCGAAACAGA
GGTACGGTGCGCTCAAATTACCCCATTCTTTATTTCTTG

Coding sequence (CDS) from alignment at P-littoralis_Contig642:8772..20710-

>mRNA_P-littoralis_Contig642.5.2 ID=mRNA_P-littoralis_Contig642.5.2|Name=mRNA_P-littoralis_Contig642.5.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1626bp|location=Sequence derived from alignment at P-littoralis_Contig642:8772..20710- (Pylaiella littoralis U1_48)
ATGATCCGTCGGTTTATTTTTTCATTATATGCCACATCGCCGGGATCGGG
TCACCCTCCTCCTCTCTTGTCGAGGGGACAGGAAACTCCGATCGGGGCTG
ATGCTGACGGCAAATGGGTTCGTGCCGGGGACATCAGCGGCGGTGGTGCA
CAGGGTTCGCTTCGGAGATATTGCGGCATGGACAACCCTCTCGCAACTAA
CGTCGATATCACCGCATACCTGGTGGAGTTCGTGCACGACAAGCAGTACT
TGTATTTTGCGTCGGTGTCGAGGGGCTGGAGGGATGCCTGGGGCCAGAAA
CGCCCCGCGGTCACCACAGCCGTCATAGTTGACACGTCGGTGTCTCAGCT
GCTGTGCAGCATTGCTTGCGGCTTGGGTCGGACTACCGCTGTGTGCGCTG
CCATATCGGCGCTAGGTAAGCTTGATCTCCTCCAGTGCGCACGAGAGAAC
GATTACCCGTGGGACGGGATGACATGTTCGACCGCGGCGAAAGGCGGCCA
CATTGATGTTCTCCAATGGGCACGGTCAAACGGGTGTCTTTGGGATAAGC
GGACCTGTTCAAGTGCTGCCGACGGAGGGCATCTTAGTGTACTTCAATGG
GCGCGGTCCAAAGGTTGTCCGTGGAGTGCATCCACGTGTTCCTGTGCTGC
CCTCGGAGGGCATATCGGCGTTCTCCAGTGGGCGCGGTCGAGCGGCTGTC
CATGGGATGCGGAAACCTGCTATTCTGCTGCCCTCGGGGGGCATCTCGGC
GTTCTCCAGTGGGCGCGGTCCAACGGTTGTCCTTGGAACATATACACACC
CTACAGTGCTGCCCTAGGGGGGCACATCGGTATTCTTCGTTGGCTGCGGT
CCAACGATTGCGAATGGGGTCAAACGCTCTACGGCGCTGCCCTAGGGGGG
AACCTTGGCATTCTCCAGTGGGCACGGGCCAATGGTTGTCCGTGGGACAC
GTGGGCATGCTACGGTGCTGCTGAAGGCGGGCATTTCGGCATTCTCCAGT
GGGCGCGGTCCAACGGATGTCCATGGGACAGCAGCACGTGCTCCGGTGCT
GCCAGGGAGGGGCATCTCGGCATTCTCCAGTGGGCGCGGTCTAACGGTTG
TCCTTGGGATGAAAGTACGTGTTCCAGCGCAGCCGGAGGAGGCCATCTCG
GCATTCTCCAGTGGGCGCGGTCCAACGGTTGTCCATGGGACAGTTTCATT
AGCAACAGTGCCGCCCAAGGGGGGCATCTCGGCGTTCTGCAGTGGGCGCG
GTCCAACGGCTGCATTTGGGGTCCTCAGACGTGCTCCAGTGCGGCCAGGC
TGGGGCATCTCGGCGTTCTGCAGTGGGCGCGGTCCAACAGCTGTCTTTGG
GATGAAACGACGTGCTCAGCGGCTGCCAGAGGAGGGCATCTGGGCGTTCT
GCAGTGGGCGCGGTCCAACGGCTGTCCTTGGGATGAAGGAACATGCTCAG
CGGCTGCCATAGGGGGGCATCTCGGCGTTCTGCGATGGGCGCGGTCTAAC
GGCTGTCCTTGGGATGAAACGACGTGCTCAGCGGCTGCCAATGGAGGGCA
TCTGAGCGTTCTCCAGTGGGCGCAGTCCAACGGTTGTCCTTGGGATGAAG
GAACGTGCTCAGCGGCTGCCATATAG