prot_P-littoralis_Contig641.35.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig641.35.1
Unique Nameprot_P-littoralis_Contig641.35.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length190
Homology
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.750e-41
Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVL 166
            QL   F M+D G A L+LGMEI Q  G I +SQ  YV ++L+++  +   PA TPG+G  +  +PE A +L + + K YQ  VGSL +L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +  + L   L
Sbjct: 1107 QLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKLQHQL 1271          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 6.340e-41
Identity = 77/156 (49.36%), Postives = 102/156 (65.38%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDD 157
            QL   F M+D G A L+LGMEI Q  G I +SQ  YV ++L+++  +   PA TPG+G  +  +PE A +L + + K YQ  VGSL +L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +
Sbjct:  407 QLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSE 562          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.150e-39
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRK 139
            QL   F+M+D G A L+LGMEI Q+ G I +SQ  YV ++L ++  +   PA TPG+G  +  +PE A +L   + K YQ  VGSL +L +TTRW+I YAVM+L RGM  PTDQHMV AKRVLRYL G PD+P   R+
Sbjct:  123 QLSDKFNMTDGGPAELLLGMEIYQRDGDITVSQHKYVTNILNKYQMVDCKPAATPGSGPEIEQEPENAIYLSDEDKKPYQGIVGSLLFLTHTTRWEIGYAVMVLCRGMNKPTDQHMVGAKRVLRYLRGCPDMPLKFRR 260          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.230e-39
Identity = 78/169 (46.15%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    4 MSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 170
            M +F M+D+G    V+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   E + +Q   GSL YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 169          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JN29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN29_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.890e-38
Identity = 78/170 (45.88%), Postives = 99/170 (58.24%), Query Frame = 0
Query:    3 LMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 170
            LM +F M D+G   LV+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   +R+D+SYAV  LTR  A P   HM AAK VL YL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  230 LMDSFDMIDMGEVKLVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQTITGSLLYLAQCSRYDLSYAVHQLTRACANPAQVHMAAAKHVLWYLGGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 399          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.990e-37
Identity = 78/171 (45.61%), Postives = 101/171 (59.06%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 170
            +LM +F M+D+G    V+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct: 1215 ELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 1385          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.850e-37
Identity = 78/171 (45.61%), Postives = 101/171 (59.06%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 170
            +LM +F M+D+G    V+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  436 ELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLG 606          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.900e-36
Identity = 75/171 (43.86%), Postives = 98/171 (57.31%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 170
            +LM +F M+D+G    V+G+ +  D + G + ISQ  Y R + +R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D SYAV  L R  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS+   L  +G
Sbjct:  125 ELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSITGYLFFLG 295          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.080e-36
Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRS 161
            +L   F M+D+G    +LG+++  D + G + ISQ HYV ++LERFG  +ANP  TPG G  +S        L   + K YQ   GS+ YL   TR+D+SYA + L++  + P   +M AAK VLRYL G P LP V+++G   L +FTDS F A+ D  RS
Sbjct:   76 ELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRS 237          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 9.390e-36
Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 0
Query:    2 QLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVGWW 172
            +L   F M+D+G    +LG+++  D + G + ISQ HYV ++LERFG  +ANP  TPG G  +S        L   + K YQ   GS+ YL   TR+D+SYA + L++  + P   +M AAK VLRYL G P LP V+++G   L +FTDS F A+ D  RS    +  +  W
Sbjct:  151 ELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYISLLSGW 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE2.750e-4147.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J897_9PHAE6.340e-4149.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFG1_9PHAE1.150e-3952.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE1.230e-3946.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN29_9PHAE8.890e-3845.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KHG5_9PHAE2.990e-3745.61Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JF46_9PHAE3.850e-3745.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JW03_9PHAE2.900e-3643.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAK0_9PHAE3.080e-3642.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGS8_9PHAE9.390e-3640.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..56
e-value: 3.5E-9
score: 36.6
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 67..161
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 67..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig641contigP-littoralis_Contig641:129474..130043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig641.35.1mRNA_P-littoralis_Contig641.35.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig641 129167..130115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig641.35.1 ID=prot_P-littoralis_Contig641.35.1|Name=mRNA_P-littoralis_Contig641.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp
MQLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQA
NPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISY
AVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDS
DFAADDDTRRSLHRVLVHVGWWCNFVCCCTAKGCFAKYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2