mRNA_P-littoralis_Contig641.35.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig641.35.1
Unique NamemRNA_P-littoralis_Contig641.35.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 4.930e-44
Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVL 570
            +L VYVDD  L G   + V+ ++ QL   F M+D G A L+LGMEI Q  G I +SQ  YV ++L+++  +   PA TPG+G  +  +PE A +L + + K YQ  VGSL +L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +  + L   L
Sbjct: 1083 ILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKLQHQL 1271          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JN29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN29_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 9.210e-42
Identity = 86/195 (44.10%), Postives = 114/195 (58.46%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 582
            +L++YVDD+L+ G     V + +  LM +F M D+G   LV+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   +R+D+SYAV  LTR  A P   HM AAK VL YL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  205 ILAIYVDDILITGGNKEIVSRKKKDLMDSFDMIDMGEVKLVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQTITGSLLYLAQCSRYDLSYAVHQLTRACANPAQVHMAAAKHVLWYLGGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 399          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.510e-41
Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRK 489
            +L VYVD+  L G   + V+  + QL   F+M+D G A L+LGMEI Q+ G I +SQ  YV ++L ++  +   PA TPG+G  +  +PE A +L   + K YQ  VGSL +L +TTRW+I YAVM+L RGM  PTDQHMV AKRVLRYL G PD+P   R+
Sbjct:   99 ILCVYVDNCTLAGRTPSVVQDWKKQLSDKFNMTDGGPAELLLGMEIYQRDGDITVSQHKYVTNILNKYQMVDCKPAATPGSGPEIEQEPENAIYLSDEDKKPYQGIVGSLLFLTHTTRWEIGYAVMVLCRGMNKPTDQHMVGAKRVLRYLRGCPDMPLKFRR 260          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 9.080e-41
Identity = 86/195 (44.10%), Postives = 116/195 (59.49%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 582
            +L++YVDD+L+ G     V + + +LM +F M+D+G    V+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct:  412 ILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLG 606          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.640e-40
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 1
Query:    1 IVLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRS 555
            ++L+VYVDD+L+ G     V + + +L   F M+D+G    +LG+++  D + G + ISQ HYV ++LERFG  +ANP  TPG G  +S        L   + K YQ   GS+ YL   TR+D+SYA + L++  + P   +M AAK VLRYL G P LP V+++G   L +FTDS F A+ D  RS
Sbjct:   51 VILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRS 237          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.000e-40
Identity = 86/195 (44.10%), Postives = 115/195 (58.97%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 582
            +L++YVDD+L+ G     V   + +LM +F M+D+G    V+G+E+  D + G + ISQ  Y R +L+R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D+SYAV  LTR  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS    L  +G
Sbjct: 1191 ILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLG 1385          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 4.980e-40
Identity = 83/195 (42.56%), Postives = 112/195 (57.44%), Query Frame = 1
Query:    4 VLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVG 582
            +L++YVDD+L+ G     V   + +LM +F M+D+G    V+G+ +  D + G + ISQ  Y R + +R+G  QANP  TPG G  LS +      L   + + +Q   GSL YL   TR+D SYAV  L R  A P   HM AAK +LRYL GTPDLP V++KG   L  FTDS F A+ D  RS+   L  +G
Sbjct:  101 ILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSITGYLFFLG 295          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 5.700e-40
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 1
Query:    1 IVLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRSLHRVLVHVGWW 588
            ++L+VYVDD+L+ G     V + + +L   F M+D+G    +LG+++  D + G + ISQ HYV ++LERFG  +ANP  TPG G  +S        L   + K YQ   GS+ YL   TR+D+SYA + L++  + P   +M AAK VLRYL G P LP V+++G   L +FTDS F A+ D  RS    +  +  W
Sbjct:  126 VILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYISLLSGW 323          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 7.060e-40
Identity = 79/168 (47.02%), Postives = 108/168 (64.29%), Query Frame = 1
Query:   40 GVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDD 543
            G   + V+ ++ QL   F M+D G A L+LGMEI Q  G I +SQ  YV ++L+++  +   PA TPG+G  +  +PE A +L + + K YQ  VGSL +L NTTRW+I YAVM+L RGM  PT+QHMV AKRVLRYL G PD+P   R+G   L+ + D+ FA   +
Sbjct:  395 GKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSE 562          
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.060e-39
Identity = 79/187 (42.25%), Postives = 111/187 (59.36%), Query Frame = 1
Query:    1 IVLSVYVDDVLLLGVQSAEVKKVRMQLMSTFSMSDLGTASLVLGMEI--DQQPGCIEISQAHYVRSVLERFGFLQANPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISYAVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDSDFAADDDTRRS 555
            ++L+VYVDD+L+ G     V + + +L   F M+D+G    +LG+ +  D + G + ISQ HYV ++LERFG  +ANP  TPG G  +S        L   E K YQ   GS+ YL   TR+D+SYA + L++  + P   +M AAK VLRYL G P LP V+++G   L +FTDS F A+ D  RS
Sbjct:   51 VILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRS 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig641.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE4.930e-4446.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JN29_9PHAE9.210e-4244.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KFG1_9PHAE1.510e-4149.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE9.080e-4144.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAK0_9PHAE1.640e-4041.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE2.000e-4044.10Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JW03_9PHAE4.980e-4042.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGS8_9PHAE5.700e-4039.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J897_9PHAE7.060e-4047.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUJ3_9PHAE1.060e-3942.25Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig641contigP-littoralis_Contig641:129167..130115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog15368.BRADI2G31610.1
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size949
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.69e-27
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37THH@33090|Viridiplantae,3GG2K@35493|Streptophyta,3M5VU@4447|Liliopsida,3IIIB@38820|Poales
Descriptiongag-polypeptide of LTR copia-type
Cds size570
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791340.5496533-UTR-P-littoralis_Contig641:129166..1294731680791340.5496533-UTR-P-littoralis_Contig641:129166..129473Pylaiella littoralis U1_48UTRP-littoralis_Contig641 129167..129473 -
1680791340.5703275-UTR-P-littoralis_Contig641:130043..1301151680791340.5703275-UTR-P-littoralis_Contig641:130043..130115Pylaiella littoralis U1_48UTRP-littoralis_Contig641 130044..130115 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791340.5607734-CDS-P-littoralis_Contig641:129473..1300431680791340.5607734-CDS-P-littoralis_Contig641:129473..130043Pylaiella littoralis U1_48CDSP-littoralis_Contig641 129474..130043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig641.35.1prot_P-littoralis_Contig641.35.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig641 129474..130043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig641.35.1

>prot_P-littoralis_Contig641.35.1 ID=prot_P-littoralis_Contig641.35.1|Name=mRNA_P-littoralis_Contig641.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp
MQLMSTFSMSDLGTASLVLGMEIDQQPGCIEISQAHYVRSVLERFGFLQA
NPAHTPGAGKPLSNKPEGAHFLDKAETKTYQEGVGSLTYLVNTTRWDISY
AVMILTRGMAAPTDQHMVAAKRVLRYLWGTPDLPTVHRKGDMTLQSFTDS
DFAADDDTRRSLHRVLVHVGWWCNFVCCCTAKGCFAKYY*
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mRNA from alignment at P-littoralis_Contig641:129167..130115-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig641.35.1 ID=mRNA_P-littoralis_Contig641.35.1|Name=mRNA_P-littoralis_Contig641.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=949bp|location=Sequence derived from alignment at P-littoralis_Contig641:129167..130115- (Pylaiella littoralis U1_48)
ATTGTACTTAGTGTCTACGTTGACGATGTGCTTCTGCTTGGAGTACAATC AGCTGAGGTCAAGAAGGTTCGCATGCAGCTGATGAGCACATTCTCCATGT CCGACCTTGGCACTGCTTCACTGGTGCTTGGAATGGAAATCGACCAACAG CCGGGATGCATCGAAATTTCGCAAGCCCACTACGTTCGGTCGGTACTGGA ACGTTTTGGTTTCCTTCAAGCTAATCCTGCTCATACCCCGGGGGCCGGTA AACCCCTCTCCAATAAACCAGAAGGAGCACACTTTCTCGATAAAGCTGAA ACAAAGACTTATCAAGAAGGTGTAGGCTCACTCACGTATTTAGTGAACAC TACTCGATGGGATATTAGCTATGCCGTGATGATACTCACACGCGGCATGG CAGCTCCCACCGATCAGCATATGGTTGCTGCCAAGCGTGTTCTACGCTAT CTTTGGGGAACACCGGATCTTCCTACTGTGCATCGCAAAGGAGACATGAC CCTGCAGAGCTTCACGGATAGCGACTTCGCGGCAGATGACGATACGCGCC GCTCCTTGCACCGGGTTCTTGTTCATGTTGGGTGGTGGTGTAATTTCGTC TGCTGCTGTACTGCAAAAGGTTGTTTCGCAAAGTACTACTGAGGCGGAAC TGACTGCCCTGCACGCTGCTTCACGGGAAGGTGTGTACCTTCTCAACTTT CTTAAATAACTGGGCGTTAGTATTACGACCTTTCATCTTTTCTCGGATTC TCAATCTGCTCTGAGTCTGGGTTCGCAATCCATGTTCTCTTCGCGGACGA AACATATTGCGACAAAGTCTCATCTGCTTCGTCAACTGGTGGACGAATCA ACCATCGTTGTTAATCATATACCAACGAGTCTTCAGCTCAGCGACTGCTT GACGAAAACCGTACCGAAACCAGCCTTTCTTCGTCTGCGGGAAATCATA
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Coding sequence (CDS) from alignment at P-littoralis_Contig641:129167..130115-

>mRNA_P-littoralis_Contig641.35.1 ID=mRNA_P-littoralis_Contig641.35.1|Name=mRNA_P-littoralis_Contig641.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=570bp|location=Sequence derived from alignment at P-littoralis_Contig641:129167..130115- (Pylaiella littoralis U1_48)
ATGCAGCTGATGAGCACATTCTCCATGTCCGACCTTGGCACTGCTTCACT
GGTGCTTGGAATGGAAATCGACCAACAGCCGGGATGCATCGAAATTTCGC
AAGCCCACTACGTTCGGTCGGTACTGGAACGTTTTGGTTTCCTTCAAGCT
AATCCTGCTCATACCCCGGGGGCCGGTAAACCCCTCTCCAATAAACCAGA
AGGAGCACACTTTCTCGATAAAGCTGAAACAAAGACTTATCAAGAAGGTG
TAGGCTCACTCACGTATTTAGTGAACACTACTCGATGGGATATTAGCTAT
GCCGTGATGATACTCACACGCGGCATGGCAGCTCCCACCGATCAGCATAT
GGTTGCTGCCAAGCGTGTTCTACGCTATCTTTGGGGAACACCGGATCTTC
CTACTGTGCATCGCAAAGGAGACATGACCCTGCAGAGCTTCACGGATAGC
GACTTCGCGGCAGATGACGATACGCGCCGCTCCTTGCACCGGGTTCTTGT
TCATGTTGGGTGGTGGTGTAATTTCGTCTGCTGCTGTACTGCAAAAGGTT
GTTTCGCAAAGTACTACTGA
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