mRNA_P-littoralis_Contig641.8.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig641.8.4
Unique NamemRNA_P-littoralis_Contig641.8.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 926 bits (2393), Expect = 0.000e+0
Identity = 612/677 (90.40%), Postives = 623/677 (92.02%), Query Frame = 1 
Query:   79 MANRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTGMETARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWK-KKGAGEDALGVFKLG 2106
            M+NRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNW+KYSTWEESQMEFERA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAEL+DSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIM+NRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTRE        VYERAIANVPPV+EKR+WRRYIYLWINYALFEELQAEDAQRTREVYRACLDV+PHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWK                    RLLERTQHVKVWISYAQYEAK  ++TAR VFRRGYD LRRQGLKEERVKLLEAWRAAEKA+GKGKT+GLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQ WK KKGAGED L  FKLG
Sbjct:    1 MSNRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELSDSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTRE--------VYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXXRLLERTQHVKVWISYAQYEAKAELDTARVVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTRGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWKQKKGAGEDGLAGFKLG 669
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 610 bits (1574), Expect = 1.280e-203
Identity = 457/663 (68.93%), Postives = 513/663 (77.38%), Query Frame = 1 
Query:   85 NRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTGMETARG----VFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWK 2061
            +RN+Q KNRAPA IQI+AEQILREA+DRQ+DVEVKAPRQQITD EEL VFRMRKRKE+ED+IR QR+HIG W+KY+ WEESQ EF RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM+WEP+DNA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAL+EL +  +TEKL+ +FA FEERCKE+DRARVIYKYALDQMPR+ VP+LYR+F GFEKR G+  GIE+ ++  RRLQYEE  +A P  YD WFDY RLEESTGD +R RE        VYERA+A VPPV +KR+WRRY++LWINYALFEEL A+D  R R V +ACL V+PH+SFTFAKIWLMLA  EVR +DL AARKVLG AIG CPK KLFKGY+ LE  LGEI+RCR +YS+ L   P DC  W +FA LE ++GE ER+RAVFELAI QP LDMPE L                         ERTQHVKVW SY  +E              VF RGY  LR+  L+EERV LLEAWR  EKA   G    L+ VE++MPR+ KK+RM+ G  GE +GWEEYYDY+FPDDE  PANLKILEMAQ WK
Sbjct:    2 SRNIQVKNRAPAPIQISAEQILREARDRQIDVEVKAPRQQITDAEELTVFRMRKRKEYEDSIRMQRQHIGTWIKYAAWEESQAEFARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMDWEPDDNAWGAYIKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALSELDEESRTEKLYISFAQFEERCKEYDRARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVRE--------VYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRCPKGKLFKGYIALELQLGEIERCRTLYSRYLAWSPGDCAAWTRFAELERTLGEDERARAVFELAIAQPALDMPEALXXXXXXXXXXXXXXXXXXXXXXXXXERTQHVKVWASYGAFEXXXXXXXXXXXXXXVFERGYAALRQMDLREERVILLEAWRDMEKARSGGDAAALRAVEARMPRRLKKKRMLLGDQGEEVGWEEYYDYRFPDDEQAPANLKILEMAQKWK 656
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A4D9CYM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA)

HSP 1 Score: 549 bits (1415), Expect = 6.440e-180
Identity = 377/700 (53.86%), Postives = 437/700 (62.43%), Query Frame = 1 
Query:   85 NRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------FERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCP-KEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEA---------------ELARQLFERLLERTQHVKVWISYAQYEA--KTGMETARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKKGAGEDALGVFKLG 2106
            +R V  KNRAPA+IQITAEQILREA DR +  E KAPR  ITD EELR +R+ KRKEFED IR+QR  +G +MKY+ WEESQ EFERA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     F ++ +WE  +                                                         RAL EL ++EK E+L+ AFA FEER KE++R+RVIYKYALD +PRE++PELY+ F+ FEK+HG    IE+V++S RR QYEE  SA PLDYD WFDY RLEE  G+L   RE        VYERAIAN+PPV EKR+WRRYIYLWINYALFEELQA + +R REVY+ACL VIPHK FTFAKIW++ A  EVR KDL AARK++GQAIG CP KE LFK Y+QLE  LGE++RCR +Y+K LEA+PS C  W   A LE  VGE ER RAV ELAI QP LDMPE LWK YIDFE E  +                            RT+HVKVWISYA YE   + GME AR VF RGY  L+ Q LKEER+ LLEAWRA EK  G      L  VE+K+P++ KK+RM+ G +G   GWEEYYDY FPDDE +P+ L IL+ AQ WK      DAL   K G
Sbjct:    2 SRKVLVKNRAPAAIQITAEQILREANDRVVQ-EDKAPRVHITDPEELREYRVMKRKEFEDQIRRQRMFLGTYMKYAAWEESQHEFERARSVYERCLDVDYRNTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMLGNITAGAYVVCHPTMRAFLKYAKWEERNQFQPALARVVYE---------------------------------------------RALQELPEAEKGERLYVAFARFEERQKEYERSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVRE--------VYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAREVYKACLRVIPHKVFTFAKIWVLAAHLEVRCKDLGAARKLMGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWXXXXXXXXXXXXXXXXXXXXXXXXXXRTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGD--RASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWK------DALAKAKAG 639
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A8C8FYG3_ONCTS (Crooked neck-like protein 1 n=2 Tax=Salmoninae TaxID=504568 RepID=A0A8C8FYG3_ONCTS)

HSP 1 Score: 546 bits (1408), Expect = 6.110e-177
Identity = 405/661 (61.27%), Postives = 487/661 (73.68%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYE----AKTGMETARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKK 2067
            + KN+APA +QITAEQ+LREAK+R+L++    P+Q+ITDEEEL  ++++KRK FED IRK R  I NW+KY+ WEES  E +RA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           FERW EWEPE+ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++    +    E LF AFA FEE+ KEF+R RVIYKYALD++P+ Q  EL++ +  FEK+ G  +GIE+VI+S RR QYEE   ASP +YD WFDYLRL ES  D D  RE        VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD+IPHK FTFAKIWL+  +FE+R K+LQAAR+ LG AIG CPK KLFKGY++LE  L E DRCRK+Y K LE  P +C  W +F+ LE  +G+TER+RA+FELAI QP LDMPE LWK+YIDFE E  E +  R L++RLL+RTQHVKVWISYAQYE    A   ++  RG+F  G   LR    KEER+ LLE+W+  E+  G   T+  + V+  +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WK++
Sbjct:   16 KVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELNDYKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGNIAGCRQVFERWTEWEPEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEFFGEEHVNENLFVAFARFEEKQKEFERVRVIYKYALDRIPKHQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTARE--------VYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLFGQFEIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFAPENCTTWIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRGLYQRLLQRTQHVKVWISYAQYELSIDASDRLQRCRGIFEEGNKGLRSCEEKEERLMLLESWKEFEQEFGSDTTR--ERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKRQ 666
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A3S2LKX8_ORYJA (Uncharacterized protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A3S2LKX8_ORYJA)

HSP 1 Score: 544 bits (1401), Expect = 7.520e-177
Identity = 411/667 (61.62%), Postives = 494/667 (74.06%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTG----METARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKE-VESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKKGAGED 2082
            + KN+APA +QITAEQ+LREAK+R+L++    P+Q+IT+ EEL  +++RKRK FED IRK R  I NW+KY+ WEESQ E +RA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            FERWMEWEP++ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+    +    E LF AFA FEE  KEF+R RVIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VI+S RR QYEE   A+P +YD WFDYLRL ES GD D  R+        VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +DA+RTR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQAARK++G AIG CPK KL KGY++LE  L E DRCRK+Y K LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE E  E E  R L++RLL+RTQHVKVWISYA++E        +   R +F      +R    KEER+ LLE+WR  EK  G   + G +E V+  +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WK++    D
Sbjct:   16 KVKNKAPADVQITAEQLLREAKERELELLPPPPKQKITNAEELNDYKLRKRKAFEDNIRKNRTIISNWIKYAQWEESQKEVQRARSIYERALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLGNVAGCRQAFERWMEWEPDEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFYGEDHVNESLFVAFAKFEEIQKEFERVRVIYKYALDKIPKHQAQELFKNYTMFEKKFGDRRGIEDVIISKRRFQYEEEVKANPHNYDAWFDYLRLVESDGDPDTVRD--------VYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDAERTRQVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFENTRNLYKRLLQRTQHVKVWISYAKFELSVEGPDRLAKCRQIFEEANKSMRNCEEKEERLMLLESWRDFEKEFG---SDGSRERVQKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKRQQINTD 671
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A3Q1IAV8_ANATE (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1IAV8_ANATE)

HSP 1 Score: 542 bits (1397), Expect = 7.610e-177
Identity = 415/671 (61.85%), Postives = 496/671 (73.92%), Query Frame = 1 
Query:   91 NVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTG----METARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKK---GAGED 2082
            +   KN+APA +QITAEQ+LREAK+R+L++    P+Q+ITDEEEL  +++RKRK FED IRK R  I NW+KY+ WEES  E +RA               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FERWMEWEPE+ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRA+    +    E LF AFA FEE  KEF+R RVIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VI+S RR QYEE   A+P +YD WFDYLRL ES  D D  RE        +YERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD+IPHK FTFAKIWL+  +FE+R K+LQ ARKV+G AIG CPK KL KGY++LE  L E DRCRK+Y K LE  P +C  W +FA LE  +G+ ER+RA+FELAI QP LDMPE LWK+YIDFE E  E    R L++RLL+RTQHVKVWISYA++E        ++  R ++      +R    KEER+ LLE+WR  EK  G   T+  + V   +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WKK+   G GE+
Sbjct:    4 STSVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELNDYKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVFERWMEWEPEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVEFFGEEHVDENLFVAFAKFEETQKEFERVRVIYKYALDRIPKSQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADSDTVRE--------IYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQFEIREKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDIERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRLLQRTQHVKVWISYAKFELSIDSPERLQKCRQIYEEANKSMRNCEEKEERLMLLESWRDFEKEFGSDSTR--ERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKKQQVDGNGEN 664
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BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A3B3IGK4_ORYLA (Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Oryzias TaxID=8089 RepID=A0A3B3IGK4_ORYLA)

HSP 1 Score: 543 bits (1399), Expect = 1.540e-176
Identity = 408/666 (61.26%), Postives = 491/666 (73.72%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTG----METARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKKGAGED 2082
            + KN+APA +QITAEQ+LREAK+R+L++    P+Q+IT+ EEL  +++RKRK FED IRK R  I NW+KY+ WEESQ E +RA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            FERWMEWEP++ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A     +    E LF AFA FEE  KEF+R RVIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VI++ RR QYEE   A+PL+YD WFDYLRL ES GD D  R+        VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQAARK++G AIG CPK KL KGY++LE  L E DRCRK+Y K LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE E  E E  R L++RLL+RTQHVKVWISYA++E        +   R +F      +R    KEER+ LLE+WR  EK  G   ++  + V   +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WK++    D
Sbjct:   16 KVKNKAPADVQITAEQLLREAKERELELLPPPPKQKITNAEELNDYKLRKRKAFEDNIRKNRTIISNWIKYAQWEESQKEVQRARSIYERALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLGNVAGCRQAFERWMEWEPDEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEFYGEDHVNENLFVAFAKFEEMQKEFERVRVIYKYALDKIPKNQAQELFKNYTMFEKKFGDRRGIEDVIINKRRFQYEEEVKANPLNYDAWFDYLRLVESDGDPDTVRD--------VYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFENTRNLYKRLLQRTQHVKVWISYAKFELSVDGPDRLAKCRQIFEEANKSMRNCEEKEERLMLLESWRDYEKEFGSDSSR--ERVSKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKRQQINTD 671
[Close]
BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A7RRV5_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RRV5_NEMVE)

HSP 1 Score: 539 bits (1389), Expect = 4.090e-176
Identity = 426/661 (64.45%), Postives = 506/661 (76.55%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTGME----TARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKK 2067
            + KN+APA +QITAEQ+LREAK+RQL++ +  P+Q+I+D +EL  +++RKRK FED IRK R  + NW+KY+ WEESQ E +RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWMEWEPE+ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+    +    EKLF AF  FEE CKE DR R IYKYALD +P+EQ  ELY+ F   EK++G   GIE VI+S R+ QYEE   A+P +YD WFDYLRL E+  D+   RE        +YER+IANVP   EK  WRRYIYLWINYAL+EEL A+D +RTR VYRACLDVIPH  FTFAKIWL+ A+FE+R K+L  ARK LG AIG CPK+KLF+ Y+ LE  L E DRCRK+Y K L   P++C  W ++A LE  +G+ +R+RA+FELA+ QP+LDMPE LWKAYIDFE    E +  R L+ERLL+RT HVKVWISYAQ+E  TG+E     ARG+++R    LR    KEERV LLE+W+  E  D  G      E++++MPR+ K+RR +   +G   GWEEYYDY FPDD+T   N K+L+MA+ WK+K
Sbjct:   18 KVKNKAPAPVQITAEQLLREAKERQLELSLPPPKQKISDPDELAEYKLRKRKAFEDNIRKNRSVVANWLKYAQWEESQQEIQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFYGEEHMDEKLFLAFGKFEEGCKEHDRVRTIYKYALDNLPKEQCQELYKSFTQHEKKYGDKGGIENVIVSKRKFQYEEEVKANPNNYDAWFDYLRLMEAEADVSTVRE--------LYERSIANVPLAAEKTLWRRYIYLWINYALYEELMAKDIERTRLVYRACLDVIPHGKFTFAKIWLLYAQFEIRQKNLADARKALGTAIGKCPKDKLFREYIGLELQLREFDRCRKIYEKFLTFNPANCTTWVKYAELESVLGDVDRARALFELAVAQPLLDMPEVLWKAYIDFEINQEEFDHTRDLYERLLKRTNHVKVWISYAQFELTTGVEGCTDQARGIYKRADKQLRSAENKEERVLLLESWKELE--DSYGDESSQTEMKNRMPRRVKRRRKLQADDGSDAGWEEYYDYIFPDDDTSMPNFKLLQMAKMWKEK 668
[Close]
BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A8B9KJ01_ASTMX (Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Teleostei TaxID=32443 RepID=A0A8B9KJ01_ASTMX)

HSP 1 Score: 539 bits (1388), Expect = 9.060e-176
Identity = 373/661 (56.43%), Postives = 458/661 (69.29%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYE----AKTGMETARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKK 2067
            + KN+APA +QITAEQ+LREAK+R+L++    P+Q+ITDEEEL  +++RKRK FED IRK R  I NW+KY+ WEES  E +RA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FERWMEWEPE+ A                                     XXXXXXXXXXXXXXX   RA+    +    E LF AFA FEE+ KEF+R RVIYKYALD++P++Q  EL++++  FEK+ G  +GIE+VI+S RR QYEE   A+P +YD WFDYLRL ES  D+D  RE        VYERAIAN+PP+ EKR+WRRYIYLWINYAL+EEL+ +D +RTR+VY+ACL++IPHK FTFAKIWL+  +FE+R K+LQ AR+ +G AIG CPK KLFKGY++LE  L E DRCRK+Y K LE  P +C  W +FA LE  +G+TER+RA+FELAI QP LDMPE LWK++IDFE E  E +  R+L++RLL+RTQHVKVWISYAQ+E    ++  ++  R V+      LR    KEER+ LLE+WR  E+  G    K    V   +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WKK+
Sbjct:   16 KVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELNDYKLRKRKGFEDHIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFERWMEWEPEEQAWHSYINFELRYKEVDKARTIYERYILLYILNWIKYARXXXXXXXXXXXXXXXE--RAVEFFGEEHIDENLFVAFARFEEKQKEFERVRVIYKYALDKIPKQQAQELFKNYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADVDTVRE--------VYERAIANMPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGMGSAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFGPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSFIDFEIEQEEYDKTRELYKRLLQRTQHVKVWISYAQFELSVDSEDRLQRCRQVYEESNKSLRNCEEKEERLMLLESWRDFEQEFGTFANKDR--VRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKKQ 664
[Close]
BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Match: A0A3Q2WG00_HAPBU (Crooked neck pre-mRNA splicing factor 1 n=10 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3Q2WG00_HAPBU)

HSP 1 Score: 541 bits (1395), Expect = 1.030e-175
Identity = 402/661 (60.82%), Postives = 485/661 (73.37%), Query Frame = 1 
Query:   97 QAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELADSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQVYERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWISYAQYEAKTG----METARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGKGKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQNWKKK 2067
            + KN+APA +QITAEQ+LREAK+R+L++    P+Q+ITD+EEL  +++RKRK FED IRK R  I NW+KY+ WEES  E +RA              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           FERWMEWEPE+ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+    +    E LF AFA FEE  KEF+R RVIYKYALD++P+ Q  EL++++  FEK+ G  +GIE+VI+S RR QYEE   A+P +YD WFDYLRL ES  D D  R+        VYERAIAN+PP+ EKR+WRRYIYLWINY L+EEL+ +D +RTR+VY+ACL++IPHK FTFAKIWL+ A+FE+R K+LQAARK++G AIG CPK KL KGY++LE  L E DRCRK+Y K LE  P +C  W +FA LE  +G+ ER+RA+FELAI QP LDMPE LWK+YIDFE E  E E  R L++RLL+RTQHVKVWISYA++E        ++  R ++      +R    KEER+ LLE+WR  EK  G   T+  + V   +P K KKRR +T  +G   GWEEYYDY FP+D     NLK+L MA+ WKK+
Sbjct:   25 RVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDQEELNDYKLRKRKSFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGNIAGCRQVFERWMEWEPEEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFFGEEHVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVRD--------VYERAIANIPPIQEKRHWRRYIYLWINYGLYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFTPENCTTWIKFAELETILGDVERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFENTRNLYKRLLQRTQHVKVWISYAKFELSVDGPDRLQKCRQIYEEANRSMRNCEEKEERLMLLESWRDFEKEFGTDSTR--ERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKMWKKQ 675
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig641.8.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI0.000e+090.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA95_9STRA1.280e-20368.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CYM6_9STRA6.440e-18053.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8C8FYG3_ONCTS6.110e-17761.27Crooked neck-like protein 1 n=2 Tax=Salmoninae Tax... [more]
A0A3S2LKX8_ORYJA7.520e-17761.62Uncharacterized protein n=1 Tax=Oryzias javanicus ... [more]
A0A3Q1IAV8_ANATE7.610e-17761.85Crooked neck pre-mRNA splicing factor 1 n=1 Tax=An... [more]
A0A3B3IGK4_ORYLA1.540e-17661.26Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Or... [more]
A7RRV5_NEMVE4.090e-17664.45Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A8B9KJ01_ASTMX9.060e-17656.43Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Te... [more]
A0A3Q2WG00_HAPBU1.030e-17560.82Crooked neck pre-mRNA splicing factor 1 n=10 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig641contigP-littoralis_Contig641:18913..32141 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLC4
Preferred nameCRNKL1
PFAMsHAT,Suf,TPR_8
Model size3170
Max annot lvl2759|Eukaryota
KEGG koko:K12869
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071007,GO:0071010,GO:0071011,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons16
Evalue0.0
EggNOG OGsKOG1915@1|root,KOG1915@2759|Eukaryota
Ec32 ortholog descriptionHAT (Half-A-TPR) repeat
Ec32 orthologEc-27_002100.1
Descriptionspliceosomal complex assembly
Cds size2331
COG categoryS
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791339.4129052-UTR-P-littoralis_Contig641:18912..196731680791339.4129052-UTR-P-littoralis_Contig641:18912..19673Pylaiella littoralis U1_48UTRP-littoralis_Contig641 18913..19673 -
1680791339.6503642-UTR-P-littoralis_Contig641:32063..321411680791339.6503642-UTR-P-littoralis_Contig641:32063..32141Pylaiella littoralis U1_48UTRP-littoralis_Contig641 32064..32141 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791339.4441798-CDS-P-littoralis_Contig641:19673..201831680791339.4441798-CDS-P-littoralis_Contig641:19673..20183Pylaiella littoralis U1_48CDSP-littoralis_Contig641 19674..20183 -
1680791339.4569461-CDS-P-littoralis_Contig641:20775..208451680791339.4569461-CDS-P-littoralis_Contig641:20775..20845Pylaiella littoralis U1_48CDSP-littoralis_Contig641 20776..20845 -
1680791339.4732368-CDS-P-littoralis_Contig641:21233..213431680791339.4732368-CDS-P-littoralis_Contig641:21233..21343Pylaiella littoralis U1_48CDSP-littoralis_Contig641 21234..21343 -
1680791339.488402-CDS-P-littoralis_Contig641:22110..221821680791339.488402-CDS-P-littoralis_Contig641:22110..22182Pylaiella littoralis U1_48CDSP-littoralis_Contig641 22111..22182 -
1680791339.501212-CDS-P-littoralis_Contig641:22919..230881680791339.501212-CDS-P-littoralis_Contig641:22919..23088Pylaiella littoralis U1_48CDSP-littoralis_Contig641 22920..23088 -
1680791339.5153162-CDS-P-littoralis_Contig641:23420..235151680791339.5153162-CDS-P-littoralis_Contig641:23420..23515Pylaiella littoralis U1_48CDSP-littoralis_Contig641 23421..23515 -
1680791339.5276475-CDS-P-littoralis_Contig641:24126..242561680791339.5276475-CDS-P-littoralis_Contig641:24126..24256Pylaiella littoralis U1_48CDSP-littoralis_Contig641 24127..24256 -
1680791339.5434115-CDS-P-littoralis_Contig641:24740..248841680791339.5434115-CDS-P-littoralis_Contig641:24740..24884Pylaiella littoralis U1_48CDSP-littoralis_Contig641 24741..24884 -
1680791339.5548146-CDS-P-littoralis_Contig641:25183..253171680791339.5548146-CDS-P-littoralis_Contig641:25183..25317Pylaiella littoralis U1_48CDSP-littoralis_Contig641 25184..25317 -
1680791339.5663543-CDS-P-littoralis_Contig641:25878..259901680791339.5663543-CDS-P-littoralis_Contig641:25878..25990Pylaiella littoralis U1_48CDSP-littoralis_Contig641 25879..25990 -
1680791339.5761945-CDS-P-littoralis_Contig641:26900..270111680791339.5761945-CDS-P-littoralis_Contig641:26900..27011Pylaiella littoralis U1_48CDSP-littoralis_Contig641 26901..27011 -
1680791339.5868647-CDS-P-littoralis_Contig641:27992..280911680791339.5868647-CDS-P-littoralis_Contig641:27992..28091Pylaiella littoralis U1_48CDSP-littoralis_Contig641 27993..28091 -
1680791339.6036956-CDS-P-littoralis_Contig641:28843..289711680791339.6036956-CDS-P-littoralis_Contig641:28843..28971Pylaiella littoralis U1_48CDSP-littoralis_Contig641 28844..28971 -
1680791339.613312-CDS-P-littoralis_Contig641:29568..297001680791339.613312-CDS-P-littoralis_Contig641:29568..29700Pylaiella littoralis U1_48CDSP-littoralis_Contig641 29569..29700 -
1680791339.6249568-CDS-P-littoralis_Contig641:30676..308141680791339.6249568-CDS-P-littoralis_Contig641:30676..30814Pylaiella littoralis U1_48CDSP-littoralis_Contig641 30677..30814 -
1680791339.6376784-CDS-P-littoralis_Contig641:31886..320631680791339.6376784-CDS-P-littoralis_Contig641:31886..32063Pylaiella littoralis U1_48CDSP-littoralis_Contig641 31887..32063 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig641.8.4prot_P-littoralis_Contig641.8.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig641 19674..32063 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig641.8.4

>prot_P-littoralis_Contig641.8.4 ID=prot_P-littoralis_Contig641.8.4|Name=mRNA_P-littoralis_Contig641.8.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=777bp
MANRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELR
VFRMRKRKEFEDAIRKQREHIGNWMKYSTWEESQMEFERARSVYERALEV
DYRNQTIWLRYAEFEMRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEE
MLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPGKARAVFQRYVE
AHPHSRAFLKWARWEDKQSQYALARGVYERALAELADSEKTEKLFSAFAH
FEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEV
IMSNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREASCLRFFQV
YERAIANVPPVVEKRYWRRYIYLWINYALFEELQAEDAQRTREVYRACLD
VIPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYV
QLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVF
ELAIRQPVLDMPETLWKAYIDFEAENGEAELARQLFERLLERTQHVKVWI
SYAQYEAKTGMETARGVFRRGYDLLRRQGLKEERVKLLEAWRAAEKADGK
GKTKGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPAN
LKILEMAQNWKKKGAGEDALGVFKLGSGSGSGSGGGGGGEGEEGNSGGGI
KRKQDELAGSGAVDNEEIQLEEDEEEEGGGDARGAGKEPELSKRKIHRGE
EEEEDEEEEKAENERRDGAGVEAENL*
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mRNA from alignment at P-littoralis_Contig641:18913..32141-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig641.8.4 ID=mRNA_P-littoralis_Contig641.8.4|Name=mRNA_P-littoralis_Contig641.8.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=13229bp|location=Sequence derived from alignment at P-littoralis_Contig641:18913..32141- (Pylaiella littoralis U1_48)
GCTGTCCCCAGCTCAAACCCAAGCGTATCCCACGCCCAACGACACCGCGT
GGCGTGTGCCACCGACACCCCAGTCATCATGGCGAACCGAAATGTGCAGG
CGAAAAATCGCGCGCCGGCCTCAATCCAGATCACCGCGGAGCAGATTCTG
CGGGAGGCCAAGGACAGGCAGCTGGATGTCGAGGTCAAGGCGCCGCGGCA
GCAGATCACGGATGAGGAAGAGCTTCGCGTGTTCCGCATGCGAAAGCGTA
AGGAGGTGCGTGTGGTTTGATTACTGTTGTTGCGCTGCGTTGCAGCTGTT
ATGGCCACTGAGGGATACTCGGGCAGGGCGGGGCGGGGTGGCCTAGGTGT
GGCGTTTGACGTGCTGTAGAGGAGAGAGGGGGGGGTGATTCCAGCGGAAC
ACAAGGTGCGGCTCCAAGCTCGTGGACTGCTCTTTTTTATCTGAGTAATG
CTGGTTCCACGTAAATGCATTCAGCAGGACCGGCGGCTTATGTCGCAACG
AAGCATGTGATATGTGCCCTCTTCTATCCTGGGTGCGGCGAAACAAGAGC
ACTCGGTGACTGATGCCCTCGTGACTGCTGTCATTAATTCTTGCTTGCTT
TTCGTTGCTGTAGGTCCGTTTTCAAGAAGTTATGGCAGGTAGGGTAGAGA
GGGGTGTTATCTCGCGTGTACACCCATATTCCCCAACAGCACAGCAGAGA
GGCAGGGAGGGAGAGAGGGAGAGAGGGAGAGAGCGCGCGAGAGAGAGCTG
CAAAATGACGAGGCAGCAGCAGCTGCAGCAGCAGAGCATGTGTACCGCCA
CAGCCGCGGCATCTGTTTCAATTCTGGCTTTAGATGCCTTCGGTACAAGT
CGTGCTCACGGGTCTACATAAATAACCTTCTACCTATGTTCCAAGTACTT
CGTACGAAATTTGCTCGGGGAGGACAACTGCCGTACCCACCTCAATTGTA
ACCTCGCGAGGTCTTGCCACCCACACGAGTGCTGTCAATATCCTACCCTA
CATGATACCTGTAGGAAGCTTCGATAGCCTAGAATGCACTACATGTACCC
GCAGAGAGAAATACTGATAATTAATGTAAGTCTTTGAGGAGTTCCAACCC
TTGTAAAGCCTGTTGATCGCAGTGAGGAACATGACGTTTGCTACTTTGCC
ACAGACCAGACCTGAAGTTATCAGACCATTCCACCGCGTATGATATGGAG
ATAGCCCGTACAGCAGTAGTCATCCAGCTTTCTCCGTCTTTCACTTTCCT
TATTTATCAACTCTCGTGCATGCCGATTTCCCTCGATACATACCCTACCT
TCGACGTTTCCCCCCTTTCGCGAACAGTTCGAAGACGCGATTCGAAAGCA
GCGGGAGCACATCGGCAACTGGATGAAGTACTCCACATGGGAGGAATCTC
AGATGGAGTTCGAGCGTGCCAGGAGCGTCTACGAGCGCGCCCTGGAGGTT
GACTACCGTAATCAGGTAAGCAGTGTGGTTTCACTCGCAAGTCAGATTCG
CTGCTGTTCATGTTATTGTTTCTGCAATCACGTAACGGATTGTAAGTGAC
TCGCATTTACACTAGCAGTCGAGGCCACAAATAGATCAAGTGATTCCGCA
GTTATGTTATTACTGATGAATACATGAACTTGTACTGCTGCTTCCTGTAG
TGGTGACCAACAAGATTGCTGCCGCTGTTGAATCTGCTGCTGATGTAGTG
TTCGCTGTCCATCGCGAGGCGTGTGTGCGCGTTGACCAAGACAAGCACGT
GGCCATTCCCGTAGCCTTCCCATCTGTCTCCGAACATGCAGCCAGCGACC
GTTTTACTCGTCTGTCATATTCCACTGCTGTTTTTTTGATCGCCGTCGCT
GTTGCGTTTCTGTGTGCAGCTTCTCCTGGTGTGATAGAACTGTTGCACTA
TCGTCGATGGTCGTGTACCAATACAATGTTCACGGCAGGAAGTACTAGAC
CCTTCTGCTTGTGGTCAGTCATGCCGCATGTTGAACCCCTGACACACTTA
CACTACCGCTAAGTAAACATGCACACAGATACACGCACGGACGCACACAC
AGACACACGAACCTGCCAGGAAAATCGCACGAATATGTCTCCGGGCCATT
TTTTTTTTTGTTGGCGGGCAGCGGGGGCAGGGAGGTGTGAAGCAACAGCT
GGTGTCAGATTCGAGCCCTGATTTTTTTATATCCTACTCGAACAGAAGAT
CTGCACTACAGCCCGGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTTTTGCGTCTCGCGCCTCTCGTTGATGC
TTCTGTTCGTTGATATCACCTTCGTTGTTCTCGTCTTTCATCCGCTGTTT
CGATCCCGATACCATGTGATACCATACGATGTCAATAACAGACGATCTGG
CTGCGGTACGCCGAGTTCGAGATGAGGAGCAAGTTTCCCAACCACGCCCG
CAACGTGTGGGACCGGGCGGTCGCGCTGCTGCCGCGCGTGGATCAGTTCT
GGTACAAGTACAGCTACATGGAGGTGAGCAAGTGAGGGCGAGCGGCGGTT
GGTTGGTACTGCCGCTCCTGTGTTTCTTGCATGAATACTGACAGTTGTAG
TGTGGTCGTGGTAGTCCAATGCGTGGAGTTTATTTAGGTCCCGATCTGAA
ATATGGGGGGAGGGGTAGGGTTACGTGCAAAACAGATTCGGCGATGATGC
TATGTTTGGCGTCAAGTTTATCACAACTGGGGTCTACCCAGAGGATAAAT
ATAGCATTGGTGCAAGTGTCAAATTTCATATACTGTTTATTGCAGTGCAG
CCTCAACTCTTTGGCCAACACTAGTACATCTGTGTAGTAGCGCCGGCTCG
ATTATGATCCCGACCTCCTGCACCACCACCGTTGCATCCACAAATGGGTT
TTCAAAGCGGCAACAGCAAAACAGTAGCATCGTCGCCCGACCTTACGTAT
CATACCTCCACCCCCAGCCTTGCTTATTATTTTTGTGCCTGGAGGTGGAG
AAAACAGTACCCCGTTCTTGAGCAGACACGATTGTACCAAATGTATGGAT
TACGCGAAATTGTTCGCGTGACTCAATTGTTCTTCCGCACGACCCGCTTT
TTTTTGCGATAATCTCGCAGGAAATGCTGGGGAACCCCGCGAAGGCCCGA
GCTATTTTCGAGAGGTGGATGGAATGGGAGCCGGAGGACAACGCCTGGAG
CGCCTACGTCAAGTTCGAGATGCGGCAGGAAGAGCCGGGAAAAGCCAGGT
AGGGCCCCTTGAAACTTGGACACTTTGCTTTGCTGGCTGAAGGACGGGGA
CGGAAAGGAGGGCAAGAGGAGGAGAAAGTTGGAGGAGGGACAGGGGATTG
CCGGAACTGGGGAGTAGTAAAGAGAGCAAGCAGGAGAAAGTGATGCCGCG
AGAGCGGCGCGGGAATGGAGGGCAAGAGGAGGAGCAGGGAGGGCGAGGAA
GGGCCGGAGATTGTTTGATAGAAGCTGTACGGAGAGGAGGGCATGGAGAG
GAAGCGTTTGATAGGGCGGCTGAGGAAGGCAGGGCAAGAGGAAGAGGAGG
AGGAAGAGGAAGAGGAGAGGTCGTGGGGCGGGTCCCGGTGCCGCGTGTGG
CGAAAGTAGTCATGCTGCTGCGCTGCTACTTTGCTTCTTTGTTTTGAAGC
GCTGCCTGCGCCGCGACGATAATTTTTGCTGGCACTGGATTGGTCCGTAG
CTCTGCTGCACGGACGGGGTCGATTTTCTTTTTAACGAATGTCATTGTTG
TTGTTGTCGACGGTGTTGTTCGCACTATCAGGCTTCTGTCCGGGGGGGGG
GCTGTTGTGTTCTCGGGCCTTTCCAGAAACAAAACGCGTGCTTGCATCAA
CAGAACCGTGAGGTCAATGTCTTGTGTGTATGTACATCTGTGAGGACAAT
GTCGTGTGTGTATATACTCTGTTTTACATTCATAACCGTGACCACATGAT
GCTATCGCGCGTGTGCGTCACGTTCACGCTCTGTTTTACGTGTTCGTCAG
GGCTGTGTTCCAGCGCTACGTCGAGGCCCACCCGCACTCGCGTGCGTTCC
TGAAGTGGGCCAGATGGGAGGACAAGCAGTCGCAGTACGCCCTCGCACGG
TGAGTGAGCAACCAAGCACTTTGTGCCGCAAGTGATGAACAATTGCCGAG
CAGCAACAGGGGGCGGGGAGAGAGGCGAGAAAGAGGGACGAACCGAGGGC
CACACACAGCGTGACCCTCAGTTTTGTTTAAGCATCTATATTCGAAGGTA
GTATATATGGCGTACCTCGAAGTCAATATTAATATGTAAAAAGTACAGCT
GGGTTTTCCGGACTCGCAACTAAGAATATAATTCGTAGTACATGCATACA
GGACGAGGAACGAATGAGCCTTCACATTCCTTGTCGAGTTGTGCCGCCTA
GTTCCTTACCCTTGTCTGGTCTCAGCCGGAGCTCTGGTAGCTTCTGACGG
TATACATGTACTTCGTACTTTGCATATGCTTGTGTTCGCGTCCTACGTGT
ATTTAAGTGTGCCCGTCTATGTCCGTCTGGCTGTCGGGCGTTTTCAAGTT
CCGGTTACGTATTCAGCACACGTCTGGTGATTGTTGTATCCGCTCGCTCC
ATCTGTGTCGTATGGTCCGTTTTAACACTCTGCTATACTGCTGTAGCCCG
CACGTTCATGAAGTAGGCGTCTGTTCTTGCGTTACCACCGATTTTTGTGG
GGTACACGCAGCTTCCTCCACGTATGCCCTCCTTTCTACTTGCCTCCCTC
TTCTCCTCCAGTGCACGAACGGTCCAAAGTGATTCATCAGCACAGCAGTC
AGCAAAGGAAGGAAGTCTTGCTTAATAACTCTCGCCTCCATGTGCTCAAC
TCAACATCTACCCCCCCCCCCCCCCATTGTATTTGTCCGTTTTATTCCGT
TGCTGTGCCGTGTGGTATGTCATACTGGCGATGAATTGTAGTGCAATATG
CACGCGGCGCTGGCTGTGTCATGCGTCGCTCTGTTTGTTATGCTGCTGCT
GCTGCTGCTGCTGCTGTGCGATCGATCTGACGTCATGGCGATGATGATGG
CGTTTGCGACGGCGGTGTGGTTGGTGCCAGGGGCGTGTACGAGCGAGCGC
TGGCGGAGCTGGCGGACTCGGAGAAAACCGAGAAGCTCTTCAGCGCCTTC
GCACACTTCGAGGAGCGCTGCAAGGAGTTCGACCGCGCCCGGTGAGGACA
ATCATTCAAACATACAACCAACAGCTCACGACACGCATGACTCGATCGCA
TAACTTGATCGCATGGATGGGTACGGTACGGTACGGTACGGTACGGTACG
GTACCACCACCTGATCAGGATTTTACTTGCGCGCGCGCGCGTGTGTGTGT
GAATAGTTCCGTGTGGGGCTTTTTGTGGGGCAGGAGGAGAGCGAAGGGAG
GAGTCCTCAGTCTGTCTGGTTGCTCAGGTTCATCGCCTTGTTTTCTTTGG
CAACAGCCAGCCGTTTTTGGCATTGGTGCATGAAGACCGAGTTGGAGTAT
ATGACCCGACCCGACCCAACCCGACCCGTCAGATCTGATCCGCATTGTTG
CTGTTGTCGTTGGCGGGGGTGATGGTGGTGGTGGTGGGGGTGGTGGGGGT
CACTTTCTACGACAGTTCCGAGTTATGACGATGGTGTGTGCGTATCGCAC
AGCAAACACGTAAACTCTCATCGCCGTAATATCGTGTTGTGTTTGTGGGG
AGCGAGAGAGGCTGCACGGTTCCACGCACAGGCGAACCGGTCATGCAGCA
CTATGTGAGAGGCCCCAGCCAGTTGGACCTGCCCGAGAGGACAAGAGAAA
ATGCGATGTTGAAGTTGACCCCGCCACCATTTTTGCGTGTAGTACACATG
ACCGGCCGTCTGCATTAAGAAAGCCTTGGCCTTGTTGAAACCCTTGTGGG
CTGGCCCCCAATATCCTGGTGGCGAAACACTCAACAATCGTGACTCGACT
CCTAGGCTCCGCTTCGTTTTTTTCGGCAATCAGGGGGGTACTAACGCTTC
CCTCCCCCCCCCCCTGCCATTGCTGCACCGTCCGCCCACACACCGTTTCC
CCCCCCCGACTATTGACTTCGTGTATGTTCTCCTTGCGGTTGCATGATAA
GTGTCATATACAAGTACGCCTTGGACCAGATGCCTCGGGAGCAGGTCCCC
GAGCTGTACCGGGACTTTATCGGTTTCGAGAAGCGCCACGGCTCCGTTCA
GGGCATCGAGGAGGTCAGTCAGGAGAAGGAGACTCAAAACATCATAACAC
GAGCAGCGCGTTTACTGTTATTTGCAGTTACTTTAATACGGAGTGCTCAC
CTTTCGTGAAGGCAGTGTTAGAGAAGAAAAACGCATGGTGCTGGCAATTC
ATCCATCGCACTTTTACGACGTAGCACTATTGCTTTACCACGCAGGTGGG
AAAAATTGTCATGACTGAGCAAAACGAAACTTTTTCAGAGCGCTTTTCCA
ATCTTCTCCGCTATACCAACAAGCGGCTGAGAGAAGGCGCACTTGGTATT
TTTTTGTTGGGGAAGATAAGATGAAACCCCAACGCTCTTCCCGGCGATCA
CCCCAAAACATCGCAGGCGACTTGCCCCCATGTTCTCTGGCAGTGGCAAC
CTCGTGGAAGTTTTTCCTGTCTGTACAGTGCTCCCCACTCCCTCTCTTCT
CCCTTCGCTCCGAAGCTGCTGTCGAATGATAATAAATACGAAGTATACGC
GAAGTAGAAGTTCATATATGCACGTGCTCCTTGTCTATCCGCATGTGTTT
TTCTGCTTGACGTACATATGATAGGTGATCATGAGCAACCGGCGACTGCA
GTACGAGGAGCGCGCTTCGGCGTCCCCCCTGGACTACGACAACTGGTTCG
ACTACCTCAGGCTGGAGGAGTCCACCGGAGACCTGGATCGCACGAGAGAG
GCGAGTTGGTTTTTGTGGCTGGGCTCTTGTTTTGTTTCGCTGTGTACGAA
CTTCGTTTGTTTTTGTCTTGCTTTCGCAACCAACGAGCCGAGAGGGTTGG
GTTGGAACACGCACGTGTCGCATCTATGATACGGTTGTGTTGCTGTTGCT
GTTGCTGCTGCTGTTGCTACTGCTGCCGCCACCGCCCCCTTCGTCCTGCT
CTGTTTTTGTCCAGCACAAGCGGGGGAGTCTAGGGTAGATGGAGCGTGGT
GGCTGATGTACCCAGAGATTTTGTGATGCCTTTGTCTTTCTGTTTTGACA
GTTTTAGTTTGCGTTTTTTTCAGGTTTACGAGCGTGCAATTGCGAACGTC
CCTCCGGTGGTCGAAAAGCGTTACTGGAGGCGCTACATTTACCTCTGGAT
CAACTACGCCCTTTTCGAGGAGCTTCAGGCCGAGGATGCACAGCGAACTC
GGTGAGTTCCTCTTTGCCGTCTCTCTCTGCTCTCTCTCTCTCTCTCTCTC
TCTCTCTAGCAGCAGAAGTTGCGCCCGAAGTTTCTGTTTCATGTCTCTAG
CCCGTAGACGTGGGTGCAGTTTTCACGAGACAGAGAAAGAGGGCGTCAGT
GAGTATTGCTTGCATACGTACCTTTCAGCGTGGTGCTTGCCCCGGGATGT
GTTTTGGCTATGCTTTTGTGTGGTGCCTCTGCTGTCACTCGAGCGGGTGT
ATGGGTGGGTGGGTGGGTGCCCCTCGATCTTCCCTCTCGTGCTTGATTAA
TCGACAACAGCCTTTACGATACACTCTAAAGACAATCACCCAACTCTCGG
TCGTCTCCCTCCAAACCACCGCTGTTACGGCGTCTAAGTTTCCAACACGC
GCCCATGAATGAACGCTCGTGTTGGCTGATCGATGAAAATGATCGACTCG
TGCTGCTGCTTCTGCTTCTGCTACCGTATGCACAGCGAGGTGTACCGGGC
GTGCCTGGACGTTATCCCTCACAAGTCGTTCACCTTCGCCAAGATCTGGC
TCATGCTGGCAAAGTTTGAGGTCCGCCACAAAGACCTCCAGGCGGCGCGG
AAGGTTCTGGGCCAGGTGGGAGAACAAACCGAAGAGGGGTTCGGTAGAGG
TGGAGGGCGCTGGGGAGGCAATGGCGAAACAGGTTTACAGAGAAGGAGGA
AGGGAGGGAGGGAGGGAGGGAGCCCATGGTAGTGTACGGTCGATGTTGAG
GGCGCCGGTGGGTGGTTGTCGAAAGGGCACTTTTGTGTGAGCATGCATCT
AGTGGTGGATGGTGTCGGTGAAAGGAGTATGTTCGCTTGGCTGTAGCAGA
ACCGCTGTGTGTTCGCGCTTGCTTGCTCTTGCTCTTGCTCTTGAACAGCT
TTGTGCGCGCATGTACGCGCTGCCCACTCCAGACCGTTTGGTGCATCAGG
ATCGCCAAGAATACCTCTCGCCGCTTTGCGATTGGCGCGGTCCTCGGTTC
TTTGTATTTTATACTCGTACAACTAACACATGACATCGCGCCCTGCGTCC
CAGAGAACATTCATGAGTGCAGGGGTCGCCGATTATGCTTTGCACTCCTG
GTCGAGGTTCTACACACTAAAATTTTACACTTTCGACGCATGAGTTTGAT
ATCCGAGCCGTGCTTTCGTTTTGCTTTCATTCATGAGCATATCCTGCACC
CCCCCCGTCCCTTCCATGATTTCCAGGCCATCGGCATGTGCCCGAAGGAG
AAACTGTTCAAGGGATACGTGCAGCTGGAGAGGGATTTGGGAGAAATCGA
CCGCTGCCGCAAGGTTTATAGGCGAGTTGTTAGGAGACGTTTCGCGCCGG
CTTTGCGTGCTCCGTTTTCATAGCTTGTCAGGCGAGAGTTTGTTAGACGA
GACGTTTCGTGTGAGCGGCCTCGCCTCGTTTTGGCGTGGAATTCTAGTAC
TCGAGCGAAACATCTGGCGTGTTTGTCGACGTGTGGCTACTGCTGGGACC
TGGGCATGACGATGGGTTTTTGATGGTTATTGCACGGATCTTTTTCTTTT
GTTTTTTTTCTGTATTTCCCCCCCCCCAAAAGAAATTGTTGCGTTTTTTT
GGTAACTTTCTTGTATGTTGTTAAAATGCATTTGTACTCCTGACTTTGTT
CAGCAAATGCTTGGAGGCGTTTCCTAGCGACTGCGGGGTGTGGGCGCAGT
TCGCCGCTCTGGAGGGATCCGTGGGGGAGACGGAGCGATCCCGTGCCGTG
TTCGAGCTGGCCATCCGACAACCGGTGCTGGACATGCCGGAAACCCTATG
GAAGGCGTATATCGACTTCGAGGTGTGTTTGTGTGGGCCGTAGTAAAAGG
CGAGAACTGTGGCTACAATCAAAGGAGGTACAGGCTCGTATCATATACCC
TGGCACGGAGTACTTGGTACAAAACGTTCGTGAGTTCTAGGAGTATCACA
AGCAAGCAGACAACCGATTCACAACTTCGCTTCAATATTCGTCGAGATCC
TCGTCGAAGCAACGGCAAAGTCGATACACGTATCACATGTACAAGTTCGA
TAAAATGTCATATGATACAAAGTACTTCGAAGTACCATGTACGACTGGAG
AATAAAACACGAAATAGATGTTGAACTACTTCATTCCCCTCCAAACTTGT
GCTGAAGGCGCGGAGCGCGGAAGGAAGGGATTGTTTTATGTCGTGAAGTG
ACATGGATCACCAAGCCGAGGTGTTATTTCGCGCTACGGATCGACTGGGC
GAAGACAAACGGTTAAAGAAGGCCGGGGCGGGGTGGGGTTGATTATGACC
GTTTGTTTTTTTAATTTTTACAGTCGGCACACGTCACCCACGGGATTTGC
TTCAGCCCGAGTTTTTTACTCTCAGAAGTTGTTTTTAGCAGGATGAAGGG
TATGTCTCCGCCACAGCCATGCACTTTTCATTTCTACTGCTGAGTTCTCG
AAGCTTGGTTACAACAGTACATTTAGTACCGCAATACGGAGTCTTAGTTT
TTTTTTTATCATCGCCCAAAGTCGATGCGCTCTCGTCTGGTGATACACCG
CCGTGGCAGGCGGAGAACGGGGAGGCGGAGCTGGCGCGGCAGTTGTTCGA
GAGGCTGCTCGAGCGCACTCAGCACGTCAAGGTGCGTTGGTTGAAAAAAT
ATTGTTTTGAGGAGAGGCAGAGCATTCATCTTCAGTTTTTTTATTTGCAG
AGAATTACTGCTCTCGTCACCAGACGCCATTTTTTTGCACCCGCGGTCTG
AAAATGAAAACGGCAGTTAATAGGAAGAATATGCTCGTTTCATACCTGCG
TTTACCGGTATGTGCGTAGGCATGTTTGCTTGAATGCATCGGTACCATGT
GTATTGCGTATGTTGCCACGGTCGGCCACTTTTTTGTTCCGCTAGTTCCG
CTAGTTCTTTGGTCCACGCCTGTGACGGGTCGCTTGTGTGTTCCCCACTG
CTACATACTTGCATTCCTCTTTCCTCCTTCCCGGTTAGAGGTCTGGTAGA
ACTTGACTGACATGATGACCGAGTCAAACGGTTTTTGTTTCGTCTTTTCT
TTCGAATTTGTAATTCGGCTTTTTTTTTTCGCAACCATTTTGTTCACTCA
TTAAAACTTCGATGACCGTCATTAGGCATATGATACGATGTACTTCGTAT
CAAATAGTTTTTTCGACCAATGATATCAAACATAGTTCTGTGCTTTCTCT
CCTTGTGCCCCTTAAACCATATCTTCTCGCGCCGTGTTCGATATGCCTGC
TTCTTCGCGCTCGCTCCTCTTGTTGTTATTGAGAAAAAACACACACACAC
ATTTGTGCTTGCTTTTCCACCAACCACGGGCTTTGTGATTTTGACCACCA
ACTAATGTGAGATTTAACAACACAACACAACAACACTTCCACACACAGGT
CTGGATTAGCTACGCGCAGTACGAGGCGAAGACAGGCATGGAGACCGCTA
GAGGCGTTTTCCGTCGCGGTTACGACCTCCTCCGAAGGCAGGGCCTCAAG
GAGGAGAGGTGAGCGTTTTGTGCTGTATTGCGTCGCGTCGTGTTGTGTCG
AGCCAACCAACGCAGGCCTTTCTTCGCGGGAGGGGAAACGCAGTCCACGG
ATTGATTGTGGTTCATGCAGGCCGCACGTTCAGCAGTAGCATTTCGTGTG
CTTTTGTTGCGTTCTTGTCTACAACGGTGGTATGGTGAGCAAGGCCAGGG
GGAGTATCATATGTGGGGCAGGCAAAGAGTCCTTTCTTCTCGTCCATTTT
TTGTGAAGGGGCTGTTTCCATTTGTAGATAAGTACACTTTTTCTCGGCCG
AAGTACATTTGGCCTCTATGTTGGAATAGACTTGAGCACTTCTGAAGGTA
AGCAATACATTTTATTGCCTGTTTGTCCGTGCATGTGATGGAACAGAGTG
AAGCTTCTGGAGGCGTGGCGTGCGGCCGAAAAGGCCGATGGCAAGGGCAA
GACCAAGGGGCTCAAGGTGCGTTTGACACGGACTTACACTCGGACACGCC
GCTTCCCGCAGCGTTTTGTTGGTTGTTCATTGATGCGCGCAAAGTCACCG
ACACTTCTCGAAGCATTTGCTGAGCCATGTCGCTACGTCTTGGTGCTTTG
CACGCCTGCCATGAATCGTGGGTTATGTACGTGGCTTTCGTTAGCAGAGA
CCGCACTACCTGGCGGACTGATGAAAACACATAAGTTCCAGAGGTTCAAA
ACGCACAATGCTTGCTTCAACCGGGGTCCCTGTATGGAGGAATGCTTGTT
TTTGTGCGAGTTTGTGTTCCTACCCTTTGACTGTCGTAGAGTACATAGTG
GGCGGTCGCCAAAACGTTTGCGCAGTCGTGTGAACAGAGCGCTTTGTCGA
CCTATTCTGCGCCAGCAGCCAGCAGCCCTTCCCCCCCTCCCTCCCACCTC
AAACCCCGCCAAAACCCCTTCTCTTCCAATTCACGCGTTTACCCGTATGT
ACAGCACGATAGGGCCCAATGGTATTTGTCTACAACTAAACCAATGAGCC
GAATTGTTTGTCTGTTTGTTTCGTCGGTATGTTGGGTACCCTGTATGTGT
GAGCGCAGGAAGTGGAGAGCAAGATGCCCCGCAAGTTCAAGAAGCGGCGC
ATGATGACCGGCACGAACGGGGAGGGGATGGGGTGGGAGGAGTACTACGA
CTACCAGTTCCCCGACGACGAGACGAAGCCGGCAAACCTCAAGATTCTTG
AGATGGCCCAGAATTGGAAGAAGAAGGGCGCCGGGGAGGATGCCCTCGGG
GTTTTCAAGCTTGGCAGTGGCAGTGGCAGTGGCAGTGGGGGGGGTGGGGG
CGGGGAAGGGGAGGAGGGAAACAGCGGCGGCGGAATTAAGCGCAAGCAGG
ACGAGTTGGCGGGGTCTGGGGCGGTTGATAACGAGGAGATTCAACTCGAA
GAGGATGAGGAAGAGGAGGGGGGAGGGGATGCGAGGGGGGCAGGGAAAGA
GCCTGAGCTGAGTAAGCGGAAAATTCACAGAGGCGAGGAAGAGGAGGAAG
ATGAGGAGGAGGAGAAGGCGGAGAATGAGAGAAGGGATGGGGCCGGGGTG
GAGGCGGAGAATTTATAATCAAGGTTCGGGAGTGGATGCAGAGGAGCTAT
TTGGGTGGCATCATGGTCGGTTGTCACCAAAACACTGTTCGGGAAAGGTT
TCGGGTAGGGGCGACACAAGGCGGAAGAACGCTGCAGGATAGCTTCTGCG
CGACATGGTTTTCTTTTCTTTTTTTGCCCTCTGCGGTTCGGTTTGACAGG
ACCTTCCTTCCCATGGAAGGGGCTGGATGGACAAAGACCGAGCTAAATGA
GGATGATCAATATGGTTGAGTTGGCGGCGGTTTGTGTGAGCTCCTACAGA
TGCGTCCACCACTCCTCGAGAGACTCATTTTTGCGCAGGCTCAAGGCGGT
TCTCTGTAGACGTAGCCAATAGCGGCTAAACAGGTTACAATGTAGGATTG
AACTGAGCTGAGCACCTGTTTTTGCGGTCAAATTCTTGTTTTTCAGAAAA
ATTGAAGGAGAAATTCTGAACCCTGAACCCCCAGTTGAGTAGGTCATGGC
CGCATCTGTTTGATGTGAACGACCGTGGGCGGGCAGCAGGAAGGAAGGAA
GGTGTTGTGCTGGTACTCCTCCCGCCGAAAACGAAATGTGTTCTTTGTGT
CCTTCACTCTTTGGTAACCTTATCCGGTCGAACAGTTAGGGTAATCACCA
CATACCTGTAAATGTTTCGTATCAGACGTAATGCAAACGTTCATTCTGAA
GGCCGTTCAAGATTTTTAGTTCACCTTACCGGCAGAAAACGAGCTTGCAT
TTCCCGGCCGGCTACTCGTACACATGCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig641:18913..32141-

>mRNA_P-littoralis_Contig641.8.4 ID=mRNA_P-littoralis_Contig641.8.4|Name=mRNA_P-littoralis_Contig641.8.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2331bp|location=Sequence derived from alignment at P-littoralis_Contig641:18913..32141- (Pylaiella littoralis U1_48)
ATGGCGAACCGAAATGTGCAGGCGAAAAATCGCGCGCCGGCCTCAATCCA
GATCACCGCGGAGCAGATTCTGCGGGAGGCCAAGGACAGGCAGCTGGATG
TCGAGGTCAAGGCGCCGCGGCAGCAGATCACGGATGAGGAAGAGCTTCGC
GTGTTCCGCATGCGAAAGCGTAAGGAGTTCGAAGACGCGATTCGAAAGCA
GCGGGAGCACATCGGCAACTGGATGAAGTACTCCACATGGGAGGAATCTC
AGATGGAGTTCGAGCGTGCCAGGAGCGTCTACGAGCGCGCCCTGGAGGTT
GACTACCGTAATCAGACGATCTGGCTGCGGTACGCCGAGTTCGAGATGAG
GAGCAAGTTTCCCAACCACGCCCGCAACGTGTGGGACCGGGCGGTCGCGC
TGCTGCCGCGCGTGGATCAGTTCTGGTACAAGTACAGCTACATGGAGGAA
ATGCTGGGGAACCCCGCGAAGGCCCGAGCTATTTTCGAGAGGTGGATGGA
ATGGGAGCCGGAGGACAACGCCTGGAGCGCCTACGTCAAGTTCGAGATGC
GGCAGGAAGAGCCGGGAAAAGCCAGGGCTGTGTTCCAGCGCTACGTCGAG
GCCCACCCGCACTCGCGTGCGTTCCTGAAGTGGGCCAGATGGGAGGACAA
GCAGTCGCAGTACGCCCTCGCACGGGGCGTGTACGAGCGAGCGCTGGCGG
AGCTGGCGGACTCGGAGAAAACCGAGAAGCTCTTCAGCGCCTTCGCACAC
TTCGAGGAGCGCTGCAAGGAGTTCGACCGCGCCCGTGTCATATACAAGTA
CGCCTTGGACCAGATGCCTCGGGAGCAGGTCCCCGAGCTGTACCGGGACT
TTATCGGTTTCGAGAAGCGCCACGGCTCCGTTCAGGGCATCGAGGAGGTG
ATCATGAGCAACCGGCGACTGCAGTACGAGGAGCGCGCTTCGGCGTCCCC
CCTGGACTACGACAACTGGTTCGACTACCTCAGGCTGGAGGAGTCCACCG
GAGACCTGGATCGCACGAGAGAGGCGAGTTGTTTGCGTTTTTTTCAGGTT
TACGAGCGTGCAATTGCGAACGTCCCTCCGGTGGTCGAAAAGCGTTACTG
GAGGCGCTACATTTACCTCTGGATCAACTACGCCCTTTTCGAGGAGCTTC
AGGCCGAGGATGCACAGCGAACTCGCGAGGTGTACCGGGCGTGCCTGGAC
GTTATCCCTCACAAGTCGTTCACCTTCGCCAAGATCTGGCTCATGCTGGC
AAAGTTTGAGGTCCGCCACAAAGACCTCCAGGCGGCGCGGAAGGTTCTGG
GCCAGGCCATCGGCATGTGCCCGAAGGAGAAACTGTTCAAGGGATACGTG
CAGCTGGAGAGGGATTTGGGAGAAATCGACCGCTGCCGCAAGGTTTATAG
CAAATGCTTGGAGGCGTTTCCTAGCGACTGCGGGGTGTGGGCGCAGTTCG
CCGCTCTGGAGGGATCCGTGGGGGAGACGGAGCGATCCCGTGCCGTGTTC
GAGCTGGCCATCCGACAACCGGTGCTGGACATGCCGGAAACCCTATGGAA
GGCGTATATCGACTTCGAGGCGGAGAACGGGGAGGCGGAGCTGGCGCGGC
AGTTGTTCGAGAGGCTGCTCGAGCGCACTCAGCACGTCAAGGTCTGGATT
AGCTACGCGCAGTACGAGGCGAAGACAGGCATGGAGACCGCTAGAGGCGT
TTTCCGTCGCGGTTACGACCTCCTCCGAAGGCAGGGCCTCAAGGAGGAGA
GAGTGAAGCTTCTGGAGGCGTGGCGTGCGGCCGAAAAGGCCGATGGCAAG
GGCAAGACCAAGGGGCTCAAGGAAGTGGAGAGCAAGATGCCCCGCAAGTT
CAAGAAGCGGCGCATGATGACCGGCACGAACGGGGAGGGGATGGGGTGGG
AGGAGTACTACGACTACCAGTTCCCCGACGACGAGACGAAGCCGGCAAAC
CTCAAGATTCTTGAGATGGCCCAGAATTGGAAGAAGAAGGGCGCCGGGGA
GGATGCCCTCGGGGTTTTCAAGCTTGGCAGTGGCAGTGGCAGTGGCAGTG
GGGGGGGTGGGGGCGGGGAAGGGGAGGAGGGAAACAGCGGCGGCGGAATT
AAGCGCAAGCAGGACGAGTTGGCGGGGTCTGGGGCGGTTGATAACGAGGA
GATTCAACTCGAAGAGGATGAGGAAGAGGAGGGGGGAGGGGATGCGAGGG
GGGCAGGGAAAGAGCCTGAGCTGAGTAAGCGGAAAATTCACAGAGGCGAG
GAAGAGGAGGAAGATGAGGAGGAGGAGAAGGCGGAGAATGAGAGAAGGGA
TGGGGCCGGGGTGGAGGCGGAGAATTTATAA
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