prot_P-littoralis_Contig640.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig640.16.1
Unique Nameprot_P-littoralis_Contig640.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
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BLAST of mRNA_P-littoralis_Contig640.16.1 vs. uniprot
Match: D8LHR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR7_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 7.940e-71
Identity = 109/124 (87.90%), Postives = 119/124 (95.97%), Query Frame = 0 
Query:    1 MSVHRSHGEPSASTRAATDVLVKGLGGLLRAQLTVANGDVTKAAAVTDAVAGELECMRKDVGSINVYCSDCEKKISGTGGDPSLSTALSAVDSCHQETLLLEEIMGQLEGQMAQLEERWGRLKR 124
            MS  R+HGEPSAST+AA DVLVKGLG +LRAQLTVANGDVTKAAAVTDAVAGEL+CMRKDVGSIN+YCSDCEKKI+GTGGDPSLSTAL+A+DSCHQET LLEE++GQLEGQMAQLEERWGRLKR
Sbjct:    1 MSAGRAHGEPSASTKAAADVLVKGLGDMLRAQLTVANGDVTKAAAVTDAVAGELDCMRKDVGSINLYCSDCEKKIAGTGGDPSLSTALAAIDSCHQETALLEEVLGQLEGQMAQLEERWGRLKR 124
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig640.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHR7_ECTSI7.940e-7187.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig640contigP-littoralis_Contig640:49793..59403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig640.16.1mRNA_P-littoralis_Contig640.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig640 49496..61197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig640.16.1 ID=prot_P-littoralis_Contig640.16.1|Name=mRNA_P-littoralis_Contig640.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MSVHRSHGEPSASTRAATDVLVKGLGGLLRAQLTVANGDVTKAAAVTDAV
AGELECMRKDVGSINVYCSDCEKKISGTGGDPSLSTALSAVDSCHQETLL
LEEIMGQLEGQMAQLEERWGRLKR*
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