mRNA_P-littoralis_Contig64.159.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.159.3
Unique NamemRNA_P-littoralis_Contig64.159.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A6H5KU10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU10_9PHAE)

HSP 1 Score: 655 bits (1690), Expect = 1.120e-223
Identity = 396/699 (56.65%), Postives = 468/699 (66.95%), Query Frame = 1
Query:  112 MDAVIAAHNDTSVLEQCDRLFRQLV--RVD--FSRQTRIGSEIAL----NGVVLVPRERKIAFVQRLVACDGPLGCHAIQGCLHRYVRVCAATISREGASHEGELEDWFAVVLEAIVDCLG--GEVVGERTSTQRLRCSVFLLQLLSTILKSQRGASHPERSKHAPAPLVADITADCTKDKFAASDETHCEWEKEAARLCAKVANTYIDRMIRATTALTVGRRNVDPFKDYVSESLGVADIGFWVFALSSDVLKHLRNSKWSYAHSISLMRCKRQRDGEMRVLVPDSEAAGANDDGCASHRKVVSDVLDIPGLAEAVSAFPVGRSAGTMDAALKWLEVTQLLMEAAETRWKGVLVDIFRSVPPALWRLASHKGSLLLQAEPPRSPGSAFVENGGADGALAQAMLTLVFRIVLCGGKRGSAVVPGVAGTGLCDNSKGYTTK-EGKDGGGQERESPIIRPWSTAVEALVVTATASADGATESCLGFAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSD--PLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEE-----ELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
            MD VI A NDT+VLEQC RL  +LV  RV   FS+Q   G    L    N VV  PR  KI+FVQRL  CDGPL CHAIQ CL RY+ VCA  ISR   S +GELE+W A +LE  + CL   G+   ER   +RLRC++FLLQLLST+LK++RGASHPERS H  A  +  +  D  K   AA++     WEK AA+ CA  A  Y+  M+ A TAL +  RN     + V  SLG AD GFWV +L SD LK+LR   W +    S++RCKR+RDG       D+       D   S   VVS+ LD+PGLAE V A PVG    +MD  LKW+E   LL+EAAETRW+ V+V + RSVPP LWRLA++ GSLLLQ E  RSPGSAFVE  GADGALAQAML LVFRIV    +RG   V  +    +  N +  T + + +D GG    +P  +PW+TAVEALV TATASAD   ESCLGFAG LVRLF+DQDDALVDMLL NL IFHNT       + E +A  +R  SD  P  LR LYH  LHPGVLFAALL +VRFDSGVLLDWL SPET FLQYLTM+LR A+AEWS+FA RVSCA+ VALE+  DA       EDE+   EE     EL+LSEEEA RLG+A+SCLSGLVASAR L++NGL PYN+APLLRRIDQVVSLYE+CGDA++GE
Sbjct:    1 MDMVILADNDTAVLEQCGRLLTRLVLPRVPRIFSQQAAAGGAGRLERDSNDVVSAPRNSKISFVQRLTLCDGPLACHAIQRCLQRYIYVCAEAISRGDVSRKGELEEWLAAILETTMFCLSRHGKFC-ERPLAKRLRCAIFLLQLLSTVLKNERGASHPERSSHPTANHLPGLPGDAPKAAIAANNG----WEKIAAQACAGEAANYLVGMVEAATALMLAGRNGAASSEDVEGSLGGADAGFWVLSLVSDSLKYLRKCSWRFGDPSSIVRCKRKRDG-------DAGGPETASDLPPSTTAVVSEQLDVPGLAEEVPAVPVGSGMDSMDIVLKWVE---LLVEAAETRWRSVMVGLLRSVPPTLWRLANN-GSLLLQEESSRSPGSAFVEVRGADGALAQAMLGLVFRIVQLADERGPFDVAALVDARVVPNDEDRTKELDKRDRGG----APQNQPWTTAVEALVATATASADD-QESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTA------KAELDAGSDRPGSDLPPPALRTLYHGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTMLLRFAVAEWSDFAARVSCARVVALEDGVDA---VQNTEDEKDMGEEXXXXXELVLSEEEANRLGRAMSCLSGLVASARALDRNGLMPYNIAPLLRRIDQVVSLYEECGDAEQGE 669          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: D8LQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ32_ECTSI)

HSP 1 Score: 563 bits (1451), Expect = 3.110e-189
Identity = 332/577 (57.54%), Postives = 403/577 (69.84%), Query Frame = 1
Query:  457 VVGERTSTQRLRCSVFLLQLLSTILKSQRGASHPERSKHAPAPLVADITADCTKDKFAASDETHCEWEKEAARLCAKVANTYIDRMIRATTALTVGRRNVDPFKDYVSESLGVADIGFWVFALSSDVLKHLRNSKWSYAHSISLMRCKRQRDGEMRVLVPDSEAAGANDDGCASHRKVVSDVLDIPGLAEAVSAFPVGRSAGTMDAALKWLEVTQLLMEAAETRWKGVLVDIFRSVPPALWRLASHKGSLLLQAEPPRSPGSAFVENGGADGALAQAMLTLVFRIVLCGGKRGSAVVPGVAGTGLCDNSKGYTTK-EGKDGGGQERESPIIRPWSTAVEALVVTATASADGATESCLGFAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSD--PLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEE--------LILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
            V GER   +RLRC++FLLQLLST+LK++RGASHPERS H PA  +  +  D     FAASD     WE  AA+ CA+ A TY+  M+ A TAL +G RN     + V  SLG AD GFWV +L SD+LK LR   W +   IS +RCKR+RD +     P++ A+G      +S   VVS+ LD+PGL+EAV A PVG    +MD ALKW+EVTQLL+EAAETRW+ VLV++ RSVPP LWRLA++ GSLLLQ EP RSPGSAFVE  GADGALAQAML LVFRIV  G +RG   V  +   G+  N++  T   + +D GG    +P  +PW+TAVEALV TATA  D   ESCLGFAG LVRLF+DQDDALVDMLL NL IFHNT       + E +   +R +SD  P  LR LY   LHPGVLFAALL +VRFDSGVLLDWL SPET FLQYLT++LR A+AEWS+FATRVSCAK V LE+  DA      +++ + ++E          L+LSEEEA RLG+A+SCL GLVASAR L++NGL PYN+APLLRRIDQVVSLYE+CGDA++ E
Sbjct:   11 VEGERPLAKRLRCAIFLLQLLSTVLKNERGASHPERSSHPPANQLPGLPGDAPNPAFAASDG----WETIAAQACAREATTYLVGMVEAATALMLGGRNGATSSEDVEGSLGGADAGFWVLSLVSDILKCLRKRNWRFGDPISFVRCKRKRDSDTGG--PET-ASGLP----SSTTAVVSEQLDVPGLSEAVPAVPVGSGMDSMDIALKWVEVTQLLVEAAETRWRSVLVELLRSVPPTLWRLANN-GSLLLQEEPSRSPGSAFVEVRGADGALAQAMLGLVFRIVRLGDERGPFHVAALVDVGVVPNNEDRTEDLDKRDRGG----APQNQPWTTAVEALVATATARDDD-QESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTT------KAELDTGSDRPASDFPPPALRTLYRGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTLLLRFAVAEWSDFATRVSCAKGVVLEDGVDA------VQNTQHEKETXXXXXXXXXLVLSEEEANRLGRAMSCLGGLVASARALDRNGLVPYNIAPLLRRIDQVVSLYEECGDAEQEE 558          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A1Y1K534_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K534_PHOPY)

HSP 1 Score: 67.8 bits (164), Expect = 4.030e-8
Identity = 64/200 (32.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
            FA LL+ LFSDQDD +++ ++  L I      T G        I  RN+  P    DL ++ L+P   F   L  V  DS VLLD+L+S ET FL YL   L+     WS+F +  SC               AG                    G LG  ++ L  L      L    L PYN++P+LR ++   +LYE
Sbjct:  262 FAKLLIHLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVYAFVEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWSKFVS--SCES-------------AG-------------------TGELGNTMTVLIRLNMQINRLVSKDLFPYNISPVLRLLEVCENLYE 408          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A5N4A424_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4A424_PHOPY)

HSP 1 Score: 67.8 bits (164), Expect = 7.070e-8
Identity = 64/200 (32.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
            FA LL+ LFSDQDD +++ ++  L I      T G        I  RN+  P    DL ++ L+P   F   L  V  DS VLLD+L+S ET FL YL   L+     WS+F +  SC               AG                    G LG  ++ L  L      L    L PYN++P+LR ++   +LYE
Sbjct:  525 FAKLLIHLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVYAFVEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWSKFVS--SCES-------------AG-------------------TGELGNTMTVLIRLNMQINRLVSKDLFPYNISPVLRLLEVCENLYE 671          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI00083C06BF (protein lines n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C06BF)

HSP 1 Score: 63.9 bits (154), Expect = 1.000e-6
Identity = 61/200 (30.50%), Postives = 84/200 (42.00%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
            F  +L+ LFSDQDD L++ ++  L I      T G        I  RN+  P    DL ++ L+P   F   L  V  DSGVLLD+L+S ET FL YL   L+     WS+F +  S    V   NE D                                ++ L  L      L    L PYN++P+L+ ++    LYE
Sbjct:  434 FPKILIHLFSDQDDYLIESMVCTLDI------TIG--------ISYRNAVFP----DLINM-LNPIFSFIEFLKIVSHDSGVLLDYLVSNETCFLLYLLRFLKYTRRNWSKFVSSCSECSTVTRINEMD------------------------------NTMTVLIRLKYQITRLVSKDLFPYNISPVLKLLEVCEGLYE 584          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI000A2A9437 (uncharacterized protein LOC110241604 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9437)

HSP 1 Score: 63.2 bits (152), Expect = 1.940e-6
Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRV 1875
            +  +L+ +F+DQDD +++M+L  L +  + + T         AI   N                P VLF   LS + FD  VLLD+L+S ET FL+Y+T  L+L L +W  F   +
Sbjct:  456 YINMLLDMFADQDDEMLEMMLFLLKLHISLIKTNEIGPDXQSAIDNFN----------------PHVLFVEFLSTIHFDHSVLLDFLVSSETMFLEYITCYLQLVLCDWKGFCNDI 555          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI001CF196E7 (uncharacterized protein LOC114953806 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF196E7)

HSP 1 Score: 63.2 bits (152), Expect = 2.120e-6
Identity = 41/116 (35.34%), Postives = 55/116 (47.41%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRV 1875
            F  LL+ LFSDQDD LVD LL  L ++          R  P +    N  + L+          P  LF   +  + FD  VLLD LIS ET FL+Y+ + L   + +W  F+  V
Sbjct:  519 FCSLLIALFSDQDDELVDALLFLLLLYQEIC------RAFPFSESLTNIQEKLI----------PHSLFMEFMQSIDFDHSVLLDLLISSETRFLEYIVIYLHFVVNDWKSFSLSV 618          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A4C1ZNZ2_EUMVA (Protein lines n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZNZ2_EUMVA)

HSP 1 Score: 61.2 bits (147), Expect = 5.550e-6
Identity = 62/209 (29.67%), Postives = 85/209 (40.67%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
            F  +L+ LFS+QDD LV+ ++  L I      T G        I  RNS  P ++      +L+P   F   L  V  DS VLLD+L+S ET FL YL   L+     WS F    +C    A  + G                             L   +  L  L      L    L PYN++P+LR ++   SLYE+     +GE
Sbjct:  235 FTKMLIHLFSEQDDYLVESMVCTLDI------TVG--------IVYRNSMYPDLIP-----MLNPIASFVEFLKVVTHDSDVLLDYLVSNETCFLLYLLRFLKYVRRNWSRFLE--TCQMSDAGGSRG-----------------------------LDDTMRVLLRLRMQISRLVSRSLFPYNISPVLRLLEVCESLYEELHRHLKGE 393          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A7J7ARZ2_9COLE (Uncharacterized protein n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7ARZ2_9COLE)

HSP 1 Score: 60.1 bits (144), Expect = 1.660e-5
Identity = 60/200 (30.00%), Postives = 83/200 (41.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
            FA LL+ LFSDQDD +++ ++  L I      T G        I  RN+  P    DL ++ L+P   F   L  V  DS VLLD+L+S ET FL YL   L+     W++F    SC      E                                L   ++ L  L      L    L PYN++P+LR ++   +LYE
Sbjct:  489 FAKLLINLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVFSFIEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWAKFVN--SCESIGGTE--------------------------------LSNTMTVLIRLNFQINRLVSKDLFPYNISPVLRLLEVCENLYE 635          
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A1W4XJG9_AGRPL (protein lines n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XJG9_AGRPL)

HSP 1 Score: 60.1 bits (144), Expect = 1.870e-5
Identity = 60/200 (30.00%), Postives = 83/200 (41.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
            F+ LLV +FSDQDD +++ ++  L I      T G        I  RN+  P    DL ++ L+P   F   L  V  DS VLLD+L+S ET FL YL   L+     WS+F    SC    AL                                 L   ++ L  L      L    L PYN++P+L+ ++    LYE
Sbjct:  660 FSKLLVNVFSDQDDYMIESMVCLLDI------TVG--------ISYRNAVFP----DLANM-LNPVNSFLEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRKNWSKFVH--SCDSSSALSR----------------------------TNELDSTMTVLIRLKIQINRLVSRDLFPYNISPILKLLEYCEGLYE 810          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KU10_9PHAE1.120e-22356.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ32_ECTSI3.110e-18957.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y1K534_PHOPY4.030e-832.00Uncharacterized protein (Fragment) n=1 Tax=Photinu... [more]
A0A5N4A424_PHOPY7.070e-832.00Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
UPI00083C06BF1.000e-630.50protein lines n=1 Tax=Nicrophorus vespilloides Tax... [more]
UPI000A2A94371.940e-632.76uncharacterized protein LOC110241604 n=1 Tax=Exaip... [more]
UPI001CF196E72.120e-635.34uncharacterized protein LOC114953806 n=2 Tax=Acrop... [more]
A0A4C1ZNZ2_EUMVA5.550e-629.67Protein lines n=1 Tax=Eumeta variegata TaxID=15154... [more]
A0A7J7ARZ2_9COLE1.660e-530.00Uncharacterized protein n=1 Tax=Lamprigera yunnana... [more]
A0A1W4XJG9_AGRPL1.870e-530.00protein lines n=1 Tax=Agrilus planipennis TaxID=22... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:615301..619822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog9986.ENSOCUP00000023043
Preferred nameLINS
PFAMsLINES_C,LINES_N
Model size2620
Max annot lvl33208|Metazoa
KEGG rclassRC00004,RC00064
KEGG koko:K04710,ko:K21752
KEGG ReactionR01496,R06517
KEGG Pathwayko00600,ko01100,ko04071,map00600,map01100,map04071
KEGG ModuleM00094,M00099
Hectar predicted targeting categoryother localisation
GOsGO:0000578,GO:0003002,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006355,GO:0006357,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007350,GO:0007351,GO:0007354,GO:0007362,GO:0007389,GO:0007424,GO:0007440,GO:0007442,GO:0007444,GO:0008150,GO:0008293,GO:0008544,GO:0008595,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009946,GO:0009948,GO:0009952,GO:0009954,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032501,GO:0032502,GO:0035220,GO:0035239,GO:0035277,GO:0035282,GO:0035295,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048522,GO:0048546,GO:0048565,GO:0048598,GO:0048617,GO:0048619,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055123,GO:0060255,GO:0060429,GO:0060541,GO:0061525,GO:0065007,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons7
Evalue9.29e-08
EggNOG OGs2CN0S@1|root,2QT6F@2759|Eukaryota,38GWU@33154|Opisthokonta,3BFXB@33208|Metazoa,3CWVD@33213|Bilateria,47Z89@7711|Chordata,4901Q@7742|Vertebrata,3JCQG@40674|Mammalia,35BP2@314146|Euarchontoglires
EC2.3.1.24
DescriptionLines homolog
Cds size2055
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.159.3prot_P-littoralis_Contig64.159.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 615412..619368 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791337.2729948-UTR-P-littoralis_Contig64:615300..6154111680791337.2729948-UTR-P-littoralis_Contig64:615300..615411Pylaiella littoralis U1_48UTRP-littoralis_Contig64 615301..615411 +
1680791337.3773794-UTR-P-littoralis_Contig64:619368..6198221680791337.3773794-UTR-P-littoralis_Contig64:619368..619822Pylaiella littoralis U1_48UTRP-littoralis_Contig64 619369..619822 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791337.293663-CDS-P-littoralis_Contig64:615411..6154291680791337.293663-CDS-P-littoralis_Contig64:615411..615429Pylaiella littoralis U1_48CDSP-littoralis_Contig64 615412..615429 +
1680791337.3040588-CDS-P-littoralis_Contig64:615983..6161301680791337.3040588-CDS-P-littoralis_Contig64:615983..616130Pylaiella littoralis U1_48CDSP-littoralis_Contig64 615984..616130 +
1680791337.3141332-CDS-P-littoralis_Contig64:616421..6166021680791337.3141332-CDS-P-littoralis_Contig64:616421..616602Pylaiella littoralis U1_48CDSP-littoralis_Contig64 616422..616602 +
1680791337.328928-CDS-P-littoralis_Contig64:616856..6175001680791337.328928-CDS-P-littoralis_Contig64:616856..617500Pylaiella littoralis U1_48CDSP-littoralis_Contig64 616857..617500 +
1680791337.3394315-CDS-P-littoralis_Contig64:617618..6181431680791337.3394315-CDS-P-littoralis_Contig64:617618..618143Pylaiella littoralis U1_48CDSP-littoralis_Contig64 617619..618143 +
1680791337.3539927-CDS-P-littoralis_Contig64:618455..6185811680791337.3539927-CDS-P-littoralis_Contig64:618455..618581Pylaiella littoralis U1_48CDSP-littoralis_Contig64 618456..618581 +
1680791337.3646379-CDS-P-littoralis_Contig64:618954..6193681680791337.3646379-CDS-P-littoralis_Contig64:618954..619368Pylaiella littoralis U1_48CDSP-littoralis_Contig64 618955..619368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.159.3

>prot_P-littoralis_Contig64.159.3 ID=prot_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=685bp
MDAVIAAHNDTSVLEQCDRLFRQLVRVDFSRQTRIGSEIALNGVVLVPRE
RKIAFVQRLVACDGPLGCHAIQGCLHRYVRVCAATISREGASHEGELEDW
FAVVLEAIVDCLGGEVVGERTSTQRLRCSVFLLQLLSTILKSQRGASHPE
RSKHAPAPLVADITADCTKDKFAASDETHCEWEKEAARLCAKVANTYIDR
MIRATTALTVGRRNVDPFKDYVSESLGVADIGFWVFALSSDVLKHLRNSK
WSYAHSISLMRCKRQRDGEMRVLVPDSEAAGANDDGCASHRKVVSDVLDI
PGLAEAVSAFPVGRSAGTMDAALKWLEVTQLLMEAAETRWKGVLVDIFRS
VPPALWRLASHKGSLLLQAEPPRSPGSAFVENGGADGALAQAMLTLVFRI
VLCGGKRGSAVVPGVAGTGLCDNSKGYTTKEGKDGGGQERESPIIRPWST
AVEALVVTATASADGATESCLGFAGLLVRLFSDQDDALVDMLLTNLYIFH
NTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRF
DSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEG
DASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKN
GLAPYNLAPLLRRIDQVVSLYEDCGDADEGENSD*
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mRNA from alignment at P-littoralis_Contig64:615301..619822+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.159.3 ID=mRNA_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4522bp|location=Sequence derived from alignment at P-littoralis_Contig64:615301..619822+ (Pylaiella littoralis U1_48)
TCGAAGGAATACATATCATACCAAATCATACCTTTGCAGACAACAGGCAA GACAGAACGAGGAAAGAGGGGCAGCCAGGAAAGTACGTGCACGGTTTAGC GACCGAATGGAATGGATGCTGTTATAGCGGTGAGACTCGATTTGGTCTGC GCTTACTCTACAACACAGTAGCTTGTTAAGACGGTACATTGGCGTTGGTG TATTTTGCTCTTTTTGTAAAAGGGAAAGACTGCTGTACATACTCACCATA CAGTGGGCGCCCGCAAGTAAGAAACGTCGTCAGCCAATTGTGAGAATCAA GAACAACAACAAAAACAACAATACTGTCTGCTGTAGGCAATGGCGTACAG CTGGACACCTGCTTCACAGCCAGCATGTGATAGCCTGAATCTGCTGTATA GCCAAAACCTCTCTCTGTTGGATAATATACACGACTTTGCACGTGTTTAT TCTCCATACGTGCATTACATTTGTCTGCCACTGCTGTGGGTCATGGAGCG TAGCATAATATGTGCGCTACTCCACCTTAACCAGTAATTATGAATCCGTC GTTTTTTTGCGTACACTTTGTACTAAAAAAAATGACCGTTGTACTTGTGT ATCCCAAATGTGTGCCTTTGTGTATTGTTGGGTTCGGGAAGTTTTTTTAC GCTTCGCTGTATCATCCACCATTGATATTTCAGGCGCACAACGACACCTC GGTCCTGGAACAATGTGACCGCCTTTTTCGCCAGCTGGTTAGAGTGGACT TCTCCCGACAAACACGGATAGGGTCGGAGATTGCCTTAAACGGCGTGGTC CTCGTTCCCAGGGAAAGAAAGATAGCATTTGTGAGTTTTACAACAAGAAG ATGCGTTGGGTTTCATGTGAAAAATGGCGGAATGATGGTGATGGAGAAAC GCAATCGTGGCTGGGATTTTGTCCTGCGCGTTGGAACGGTTCAAGCGTAT TTAAGCTTGCAAACGTCATCTTGAAGGTATGATGGCGTTGGTATTTGACA AAGTTCCTGTGCCAGGAGGACTTTCAAATCCATCACTCACACAGGTGTAC TTTCTCCTTTCGTTCCGCAGTGTCCGTCCTCACTTCCGGTCGCTACAACG TGCCTGGCATATGCACTACAGGTACAGCGCCTTGTGGCTTGCGATGGGCC ACTTGGATGTCACGCGATCCAGGGATGCCTCCATCGGTACGTACGTGTCT GTGCGGCAACCATTAGCCGAGAGGGCGCATCCCACGAGGGAGAGCTGGAA GACTGGTTTGCGGTGGTGCTCGAGGCCATTGTAGACTGCCTGGGCGGAGA AGGCGAGCTCTTGCTTCCGCGTTAAGTCGGCCTTGTGCGCCAAGAGAAGT GCTTGCGTTACGCTTCGATTTAAGATTGGGTCGAAAATGCGTGACTGCTC TTTCGGTATTTCGTAAGTAGACGTTTCGTGGTTACGAACGAGGGCTTCCA TTCCACCATTTAGTTGGTCGAACCAAGCTGTAGTGTAGGCCTGACGCAAC TCACCAGTTGTCAACCGTGTATTCCGATGATCGTCTGTGTTTAAAATGTT CGGCAGTCGTGGGTGAACGGACCTCCACCCAACGACTCCGATGTTCGGTG TTTTTGCTGCAGCTGCTGAGCACCATCCTCAAGAGTCAGAGAGGCGCTTC ACATCCGGAGCGCTCAAAGCATGCTCCAGCACCCCTAGTCGCTGACATCA CGGCAGACTGCACCAAGGATAAATTTGCTGCGAGCGATGAAACGCACTGT GAGTGGGAGAAGGAGGCAGCGCGACTTTGTGCAAAAGTTGCCAATACCTA CATCGACAGGATGATCCGAGCGACGACAGCGCTCACGGTGGGACGCCGAA ATGTCGACCCTTTCAAGGATTATGTCTCGGAAAGCCTTGGCGTCGCAGAT ATAGGGTTTTGGGTCTTCGCGCTCTCGTCCGACGTACTGAAACATCTGCG CAACAGCAAGTGGAGCTATGCACACTCCATCTCTCTGATGAGATGCAAAC GTCAGCGTGACGGTGAAATGAGAGTACTCGTACCCGATTCTGAGGCGGCC GGTGCCAACGACGACGGTTGTGCTTCTCATAGGAAAGTGGTGTCTGATGT ACTTGATATTCCGGGTCTAGCAGAAGCAGTTTCTGCCTTTCCTGTGGGAC GCAGCGCCGGCACGATGGATGCTGCGCTCAAATGGCTGGAAGTTACACAG GCAAGCAATTTTTGTAGCAAGCACCTGTCCCTTGACGTCGACTGTTCGGG AAGTTTCAGCACGTGTGATACAGAATGCCAACTCTACATGAATCGTGTCT CGGTGTCACTTTGATCAGCTGCTGATGGAGGCGGCGGAGACAAGATGGAA AGGCGTCCTAGTTGACATATTCCGTTCGGTGCCGCCCGCTCTTTGGCGAC TAGCAAGTCATAAGGGATCGCTACTTCTCCAGGCGGAGCCACCCCGATCG CCTGGTTCCGCGTTCGTGGAAAACGGAGGGGCAGACGGAGCTCTGGCGCA GGCGATGCTTACCCTCGTGTTTCGGATTGTGCTGTGTGGAGGAAAACGGG GATCCGCTGTTGTGCCGGGCGTTGCGGGTACTGGTCTTTGTGACAACAGC AAAGGATACACGACGAAAGAGGGAAAGGACGGTGGAGGCCAGGAGAGAGA ATCACCAATAATACGCCCGTGGAGCACGGCCGTAGAAGCTCTCGTCGTCA CGGCTACGGCGAGCGCTGATGGTGCGACAGAGTCTTGTCTAGGGTTTGCT GGGCTGCTGGTGCGGCTGTTTTCGGATCAAGATGATGCCCTCGTCGACAT GCTTCTCACGAATTTGTACATATTCCACAACACCTTACCAACGGTAAGTG CTCGCTAGGTCTTCCGGCTGTCCCGTAGAAAGAGATATTTTTTTTGTTCA TGCTCTGGGCCATCATGTGATATCACACCAAGGTTGAGGCTAAGACGGTA GGGAACAGGTCTCTGTCGCATGGTTTGGTTGGTTTGTTATCGACCACTCG TTGTTGTCGAAAAGTCAGCAGCGCCGCCCATTTTTCCTCGCTCGCCCGTT TAACTTTGGCGCATGCACTGTACCAGGTAGTTGCTGCGACGACTCCTGTG TTCAATATTGTCGAGGCAACGTTGGCGACTCATCTGACCCCCATTTTTGT TTCAGAGAGGTGAGCAGAGAGGTGAGCCGGAAGCCATCTGCGAACGCAAC TCAAGCGACCCGCTTGTTTTGAGGGACCTGTACCACGTCGTCTTACACCC GGGCGTCTTGTTCGCGGCGCTGCTGTCGCAGGTATCTTGTTTGTATGTGC ATAATTATGTACTTCAAAGTCTCCGTGTTTGATATATCCCCATGGTATCT CTAAAAATTGCAACGCCTCCATCTTCGTTTTTTTTTGTTTGCCTCGCAGA ATCAGGTTTCATACGTACGTGTTTTGATATTAAATAGTTGCGAAAAACGT TGGGGGTTGAATTCGGTGGACAAATTAGCGTTATTTTTGTGTAGCACGGC GGCCGCAAGCAGGAATTCATTGCATGAGAAAGACAGGGATCGCCGATCAA ATTCTACATCTCCTGATTCGGTTGGTGGCGCACACGATCCATTTCAGACC GGGGGTGGCCTGGCCTTTAATCATCCGCATTTGTCCCTACGAAACAATCA TCAGGTGCGATTCGATTCTGGCGTGCTGCTGGACTGGTTAATATCACCGG AGACAAATTTTCTGCAGTACCTCACAATGGTGCTGCGTTTGGCCCTCGCC GAATGGTCCGAGTTTGCCACGCGCGTGTCCTGTGCGAAAGATGTCGCACT CGAAAACGAAGGAGATGCGAGTGTTCCCGCCGGAAGAATAGAAGACGAAG AGGGGAAGGAAGAGGAAGAGTTGATTCTGTCCGAGGAGGAAGCAGGTCGG TTAGGCCAGGCAGTGTCGTGCCTGAGTGGGCTGGTAGCGAGTGCACGGGG CCTCGAGAAAAACGGGCTTGCGCCTTACAATCTCGCGCCTCTGCTGCGAA GGATCGATCAAGTGGTATCGCTCTATGAAGACTGTGGCGATGCTGACGAA GGGGAGAATAGCGATTAGAGTCTATTTGCTCTGTGAACAACCGCCAAGGC AGGGTAGAATGAGTGTGGATTCAATACTTAACGATAGCGACGTCCAATAT TGACGCAGGCACACACACTCGAGAATGGAGACCTCTTCGCGGGCACCCTT CCTTTTTTGTTTTGTTGTTTTGTTGACCATCATCATGAGCAACAGATATT GGTGCAAAATCGATTGTGCATTTCTCATCAGCTTCCTCGGCACGGGCACA CCCTAGATCTCGTGGGTCTGACGATGGATGTGGTTAAATCTTGCCTTAGG TCGTTCCCCTCGGTGTTTGCCCTCGGCTACTGATAGTCGGTTGATAATCA CCTGCAATTTTTTGTATTTGTGTTTTCGGTACGAATGGATACACGTGTGT AACTTTGTAACTTTTCGACAATGAAATGATACTACGGGGTTCGCTGTTGT CCATGAAACGCGATGACCACAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:615301..619822+

>mRNA_P-littoralis_Contig64.159.3 ID=mRNA_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2055bp|location=Sequence derived from alignment at P-littoralis_Contig64:615301..619822+ (Pylaiella littoralis U1_48)
ATGGATGCTGTTATAGCGGCGCACAACGACACCTCGGTCCTGGAACAATG
TGACCGCCTTTTTCGCCAGCTGGTTAGAGTGGACTTCTCCCGACAAACAC
GGATAGGGTCGGAGATTGCCTTAAACGGCGTGGTCCTCGTTCCCAGGGAA
AGAAAGATAGCATTTGTACAGCGCCTTGTGGCTTGCGATGGGCCACTTGG
ATGTCACGCGATCCAGGGATGCCTCCATCGGTACGTACGTGTCTGTGCGG
CAACCATTAGCCGAGAGGGCGCATCCCACGAGGGAGAGCTGGAAGACTGG
TTTGCGGTGGTGCTCGAGGCCATTGTAGACTGCCTGGGCGGAGAAGTCGT
GGGTGAACGGACCTCCACCCAACGACTCCGATGTTCGGTGTTTTTGCTGC
AGCTGCTGAGCACCATCCTCAAGAGTCAGAGAGGCGCTTCACATCCGGAG
CGCTCAAAGCATGCTCCAGCACCCCTAGTCGCTGACATCACGGCAGACTG
CACCAAGGATAAATTTGCTGCGAGCGATGAAACGCACTGTGAGTGGGAGA
AGGAGGCAGCGCGACTTTGTGCAAAAGTTGCCAATACCTACATCGACAGG
ATGATCCGAGCGACGACAGCGCTCACGGTGGGACGCCGAAATGTCGACCC
TTTCAAGGATTATGTCTCGGAAAGCCTTGGCGTCGCAGATATAGGGTTTT
GGGTCTTCGCGCTCTCGTCCGACGTACTGAAACATCTGCGCAACAGCAAG
TGGAGCTATGCACACTCCATCTCTCTGATGAGATGCAAACGTCAGCGTGA
CGGTGAAATGAGAGTACTCGTACCCGATTCTGAGGCGGCCGGTGCCAACG
ACGACGGTTGTGCTTCTCATAGGAAAGTGGTGTCTGATGTACTTGATATT
CCGGGTCTAGCAGAAGCAGTTTCTGCCTTTCCTGTGGGACGCAGCGCCGG
CACGATGGATGCTGCGCTCAAATGGCTGGAAGTTACACAGCTGCTGATGG
AGGCGGCGGAGACAAGATGGAAAGGCGTCCTAGTTGACATATTCCGTTCG
GTGCCGCCCGCTCTTTGGCGACTAGCAAGTCATAAGGGATCGCTACTTCT
CCAGGCGGAGCCACCCCGATCGCCTGGTTCCGCGTTCGTGGAAAACGGAG
GGGCAGACGGAGCTCTGGCGCAGGCGATGCTTACCCTCGTGTTTCGGATT
GTGCTGTGTGGAGGAAAACGGGGATCCGCTGTTGTGCCGGGCGTTGCGGG
TACTGGTCTTTGTGACAACAGCAAAGGATACACGACGAAAGAGGGAAAGG
ACGGTGGAGGCCAGGAGAGAGAATCACCAATAATACGCCCGTGGAGCACG
GCCGTAGAAGCTCTCGTCGTCACGGCTACGGCGAGCGCTGATGGTGCGAC
AGAGTCTTGTCTAGGGTTTGCTGGGCTGCTGGTGCGGCTGTTTTCGGATC
AAGATGATGCCCTCGTCGACATGCTTCTCACGAATTTGTACATATTCCAC
AACACCTTACCAACGAGAGGTGAGCAGAGAGGTGAGCCGGAAGCCATCTG
CGAACGCAACTCAAGCGACCCGCTTGTTTTGAGGGACCTGTACCACGTCG
TCTTACACCCGGGCGTCTTGTTCGCGGCGCTGCTGTCGCAGGTGCGATTC
GATTCTGGCGTGCTGCTGGACTGGTTAATATCACCGGAGACAAATTTTCT
GCAGTACCTCACAATGGTGCTGCGTTTGGCCCTCGCCGAATGGTCCGAGT
TTGCCACGCGCGTGTCCTGTGCGAAAGATGTCGCACTCGAAAACGAAGGA
GATGCGAGTGTTCCCGCCGGAAGAATAGAAGACGAAGAGGGGAAGGAAGA
GGAAGAGTTGATTCTGTCCGAGGAGGAAGCAGGTCGGTTAGGCCAGGCAG
TGTCGTGCCTGAGTGGGCTGGTAGCGAGTGCACGGGGCCTCGAGAAAAAC
GGGCTTGCGCCTTACAATCTCGCGCCTCTGCTGCGAAGGATCGATCAAGT
GGTATCGCTCTATGAAGACTGTGGCGATGCTGACGAAGGGGAGAATAGCG
ATTAG
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