mRNA_P-littoralis_Contig64.159.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A6H5KU10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU10_9PHAE) HSP 1 Score: 655 bits (1690), Expect = 1.120e-223 Identity = 396/699 (56.65%), Postives = 468/699 (66.95%), Query Frame = 1
Query: 112 MDAVIAAHNDTSVLEQCDRLFRQLV--RVD--FSRQTRIGSEIAL----NGVVLVPRERKIAFVQRLVACDGPLGCHAIQGCLHRYVRVCAATISREGASHEGELEDWFAVVLEAIVDCLG--GEVVGERTSTQRLRCSVFLLQLLSTILKSQRGASHPERSKHAPAPLVADITADCTKDKFAASDETHCEWEKEAARLCAKVANTYIDRMIRATTALTVGRRNVDPFKDYVSESLGVADIGFWVFALSSDVLKHLRNSKWSYAHSISLMRCKRQRDGEMRVLVPDSEAAGANDDGCASHRKVVSDVLDIPGLAEAVSAFPVGRSAGTMDAALKWLEVTQLLMEAAETRWKGVLVDIFRSVPPALWRLASHKGSLLLQAEPPRSPGSAFVENGGADGALAQAMLTLVFRIVLCGGKRGSAVVPGVAGTGLCDNSKGYTTK-EGKDGGGQERESPIIRPWSTAVEALVVTATASADGATESCLGFAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSD--PLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEE-----ELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
MD VI A NDT+VLEQC RL +LV RV FS+Q G L N VV PR KI+FVQRL CDGPL CHAIQ CL RY+ VCA ISR S +GELE+W A +LE + CL G+ ER +RLRC++FLLQLLST+LK++RGASHPERS H A + + D K AA++ WEK AA+ CA A Y+ M+ A TAL + RN + V SLG AD GFWV +L SD LK+LR W + S++RCKR+RDG D+ D S VVS+ LD+PGLAE V A PVG +MD LKW+E LL+EAAETRW+ V+V + RSVPP LWRLA++ GSLLLQ E RSPGSAFVE GADGALAQAML LVFRIV +RG V + + N + T + + +D GG +P +PW+TAVEALV TATASAD ESCLGFAG LVRLF+DQDDALVDMLL NL IFHNT + E +A +R SD P LR LYH LHPGVLFAALL +VRFDSGVLLDWL SPET FLQYLTM+LR A+AEWS+FA RVSCA+ VALE+ DA EDE+ EE EL+LSEEEA RLG+A+SCLSGLVASAR L++NGL PYN+APLLRRIDQVVSLYE+CGDA++GE
Sbjct: 1 MDMVILADNDTAVLEQCGRLLTRLVLPRVPRIFSQQAAAGGAGRLERDSNDVVSAPRNSKISFVQRLTLCDGPLACHAIQRCLQRYIYVCAEAISRGDVSRKGELEEWLAAILETTMFCLSRHGKFC-ERPLAKRLRCAIFLLQLLSTVLKNERGASHPERSSHPTANHLPGLPGDAPKAAIAANNG----WEKIAAQACAGEAANYLVGMVEAATALMLAGRNGAASSEDVEGSLGGADAGFWVLSLVSDSLKYLRKCSWRFGDPSSIVRCKRKRDG-------DAGGPETASDLPPSTTAVVSEQLDVPGLAEEVPAVPVGSGMDSMDIVLKWVE---LLVEAAETRWRSVMVGLLRSVPPTLWRLANN-GSLLLQEESSRSPGSAFVEVRGADGALAQAMLGLVFRIVQLADERGPFDVAALVDARVVPNDEDRTKELDKRDRGG----APQNQPWTTAVEALVATATASADD-QESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTA------KAELDAGSDRPGSDLPPPALRTLYHGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTMLLRFAVAEWSDFAARVSCARVVALEDGVDA---VQNTEDEKDMGEEXXXXXELVLSEEEANRLGRAMSCLSGLVASARALDRNGLMPYNIAPLLRRIDQVVSLYEECGDAEQGE 669
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: D8LQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ32_ECTSI) HSP 1 Score: 563 bits (1451), Expect = 3.110e-189 Identity = 332/577 (57.54%), Postives = 403/577 (69.84%), Query Frame = 1
Query: 457 VVGERTSTQRLRCSVFLLQLLSTILKSQRGASHPERSKHAPAPLVADITADCTKDKFAASDETHCEWEKEAARLCAKVANTYIDRMIRATTALTVGRRNVDPFKDYVSESLGVADIGFWVFALSSDVLKHLRNSKWSYAHSISLMRCKRQRDGEMRVLVPDSEAAGANDDGCASHRKVVSDVLDIPGLAEAVSAFPVGRSAGTMDAALKWLEVTQLLMEAAETRWKGVLVDIFRSVPPALWRLASHKGSLLLQAEPPRSPGSAFVENGGADGALAQAMLTLVFRIVLCGGKRGSAVVPGVAGTGLCDNSKGYTTK-EGKDGGGQERESPIIRPWSTAVEALVVTATASADGATESCLGFAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSD--PLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEE--------LILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
V GER +RLRC++FLLQLLST+LK++RGASHPERS H PA + + D FAASD WE AA+ CA+ A TY+ M+ A TAL +G RN + V SLG AD GFWV +L SD+LK LR W + IS +RCKR+RD + P++ A+G +S VVS+ LD+PGL+EAV A PVG +MD ALKW+EVTQLL+EAAETRW+ VLV++ RSVPP LWRLA++ GSLLLQ EP RSPGSAFVE GADGALAQAML LVFRIV G +RG V + G+ N++ T + +D GG +P +PW+TAVEALV TATA D ESCLGFAG LVRLF+DQDDALVDMLL NL IFHNT + E + +R +SD P LR LY LHPGVLFAALL +VRFDSGVLLDWL SPET FLQYLT++LR A+AEWS+FATRVSCAK V LE+ DA +++ + ++E L+LSEEEA RLG+A+SCL GLVASAR L++NGL PYN+APLLRRIDQVVSLYE+CGDA++ E
Sbjct: 11 VEGERPLAKRLRCAIFLLQLLSTVLKNERGASHPERSSHPPANQLPGLPGDAPNPAFAASDG----WETIAAQACAREATTYLVGMVEAATALMLGGRNGATSSEDVEGSLGGADAGFWVLSLVSDILKCLRKRNWRFGDPISFVRCKRKRDSDTGG--PET-ASGLP----SSTTAVVSEQLDVPGLSEAVPAVPVGSGMDSMDIALKWVEVTQLLVEAAETRWRSVLVELLRSVPPTLWRLANN-GSLLLQEEPSRSPGSAFVEVRGADGALAQAMLGLVFRIVRLGDERGPFHVAALVDVGVVPNNEDRTEDLDKRDRGG----APQNQPWTTAVEALVATATARDDD-QESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTT------KAELDTGSDRPASDFPPPALRTLYRGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTLLLRFAVAEWSDFATRVSCAKGVVLEDGVDA------VQNTQHEKETXXXXXXXXXLVLSEEEANRLGRAMSCLGGLVASARALDRNGLVPYNIAPLLRRIDQVVSLYEECGDAEQEE 558
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A1Y1K534_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K534_PHOPY) HSP 1 Score: 67.8 bits (164), Expect = 4.030e-8 Identity = 64/200 (32.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
FA LL+ LFSDQDD +++ ++ L I T G I RN+ P DL ++ L+P F L V DS VLLD+L+S ET FL YL L+ WS+F + SC AG G LG ++ L L L L PYN++P+LR ++ +LYE
Sbjct: 262 FAKLLIHLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVYAFVEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWSKFVS--SCES-------------AG-------------------TGELGNTMTVLIRLNMQINRLVSKDLFPYNISPVLRLLEVCENLYE 408
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A5N4A424_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4A424_PHOPY) HSP 1 Score: 67.8 bits (164), Expect = 7.070e-8 Identity = 64/200 (32.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
FA LL+ LFSDQDD +++ ++ L I T G I RN+ P DL ++ L+P F L V DS VLLD+L+S ET FL YL L+ WS+F + SC AG G LG ++ L L L L PYN++P+LR ++ +LYE
Sbjct: 525 FAKLLIHLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVYAFVEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWSKFVS--SCES-------------AG-------------------TGELGNTMTVLIRLNMQINRLVSKDLFPYNISPVLRLLEVCENLYE 671
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI00083C06BF (protein lines n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C06BF) HSP 1 Score: 63.9 bits (154), Expect = 1.000e-6 Identity = 61/200 (30.50%), Postives = 84/200 (42.00%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
F +L+ LFSDQDD L++ ++ L I T G I RN+ P DL ++ L+P F L V DSGVLLD+L+S ET FL YL L+ WS+F + S V NE D ++ L L L L PYN++P+L+ ++ LYE
Sbjct: 434 FPKILIHLFSDQDDYLIESMVCTLDI------TIG--------ISYRNAVFP----DLINM-LNPIFSFIEFLKIVSHDSGVLLDYLVSNETCFLLYLLRFLKYTRRNWSKFVSSCSECSTVTRINEMD------------------------------NTMTVLIRLKYQITRLVSKDLFPYNISPVLKLLEVCEGLYE 584
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI000A2A9437 (uncharacterized protein LOC110241604 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9437) HSP 1 Score: 63.2 bits (152), Expect = 1.940e-6 Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRV 1875
+ +L+ +F+DQDD +++M+L L + + + T AI N P VLF LS + FD VLLD+L+S ET FL+Y+T L+L L +W F +
Sbjct: 456 YINMLLDMFADQDDEMLEMMLFLLKLHISLIKTNEIGPDXQSAIDNFN----------------PHVLFVEFLSTIHFDHSVLLDFLVSSETMFLEYITCYLQLVLCDWKGFCNDI 555
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: UPI001CF196E7 (uncharacterized protein LOC114953806 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF196E7) HSP 1 Score: 63.2 bits (152), Expect = 2.120e-6 Identity = 41/116 (35.34%), Postives = 55/116 (47.41%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRV 1875
F LL+ LFSDQDD LVD LL L ++ R P + N + L+ P LF + + FD VLLD LIS ET FL+Y+ + L + +W F+ V
Sbjct: 519 FCSLLIALFSDQDDELVDALLFLLLLYQEIC------RAFPFSESLTNIQEKLI----------PHSLFMEFMQSIDFDHSVLLDLLISSETRFLEYIVIYLHFVVNDWKSFSLSV 618
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A4C1ZNZ2_EUMVA (Protein lines n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZNZ2_EUMVA) HSP 1 Score: 61.2 bits (147), Expect = 5.550e-6 Identity = 62/209 (29.67%), Postives = 85/209 (40.67%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYEDCGDADEGE 2154
F +L+ LFS+QDD LV+ ++ L I T G I RNS P ++ +L+P F L V DS VLLD+L+S ET FL YL L+ WS F +C A + G L + L L L L PYN++P+LR ++ SLYE+ +GE
Sbjct: 235 FTKMLIHLFSEQDDYLVESMVCTLDI------TVG--------IVYRNSMYPDLIP-----MLNPIASFVEFLKVVTHDSDVLLDYLVSNETCFLLYLLRFLKYVRRNWSRFLE--TCQMSDAGGSRG-----------------------------LDDTMRVLLRLRMQISRLVSRSLFPYNISPVLRLLEVCESLYEELHRHLKGE 393
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A7J7ARZ2_9COLE (Uncharacterized protein n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7ARZ2_9COLE) HSP 1 Score: 60.1 bits (144), Expect = 1.660e-5 Identity = 60/200 (30.00%), Postives = 83/200 (41.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
FA LL+ LFSDQDD +++ ++ L I T G I RN+ P DL ++ L+P F L V DS VLLD+L+S ET FL YL L+ W++F SC E L ++ L L L L PYN++P+LR ++ +LYE
Sbjct: 489 FAKLLINLFSDQDDYMIESMVCTLDI------TVG--------ISYRNAVFP----DLVNM-LNPVFSFIEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRRNWAKFVN--SCESIGGTE--------------------------------LSNTMTVLIRLNFQINRLVSKDLFPYNISPVLRLLEVCENLYE 635
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Match: A0A1W4XJG9_AGRPL (protein lines n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XJG9_AGRPL) HSP 1 Score: 60.1 bits (144), Expect = 1.870e-5 Identity = 60/200 (30.00%), Postives = 83/200 (41.50%), Query Frame = 1
Query: 1528 FAGLLVRLFSDQDDALVDMLLTNLYIFHNTLPTRGEQRGEPEAICERNSSDPLVLRDLYHVVLHPGVLFAALLSQVRFDSGVLLDWLISPETNFLQYLTMVLRLALAEWSEFATRVSCAKDVALENEGDASVPAGRIEDEEGKEEEELILSEEEAGRLGQAVSCLSGLVASARGLEKNGLAPYNLAPLLRRIDQVVSLYE 2127
F+ LLV +FSDQDD +++ ++ L I T G I RN+ P DL ++ L+P F L V DS VLLD+L+S ET FL YL L+ WS+F SC AL L ++ L L L L PYN++P+L+ ++ LYE
Sbjct: 660 FSKLLVNVFSDQDDYMIESMVCLLDI------TVG--------ISYRNAVFP----DLANM-LNPVNSFLEFLKVVSHDSDVLLDYLVSNETCFLLYLLRFLKYIRKNWSKFVH--SCDSSSALSR----------------------------TNELDSTMTVLIRLKIQINRLVSRDLFPYNISPILKLLEYCEGLYE 810 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.159.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.159.3 >prot_P-littoralis_Contig64.159.3 ID=prot_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=685bp MDAVIAAHNDTSVLEQCDRLFRQLVRVDFSRQTRIGSEIALNGVVLVPREback to top mRNA from alignment at P-littoralis_Contig64:615301..619822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.159.3 ID=mRNA_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4522bp|location=Sequence derived from alignment at P-littoralis_Contig64:615301..619822+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:615301..619822+ >mRNA_P-littoralis_Contig64.159.3 ID=mRNA_P-littoralis_Contig64.159.3|Name=mRNA_P-littoralis_Contig64.159.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2055bp|location=Sequence derived from alignment at P-littoralis_Contig64:615301..619822+ (Pylaiella littoralis U1_48)back to top |