mRNA_P-littoralis_Contig64.152.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.220e-14 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHG---IETSSQLFAVFMFGLIEIDKSVADESV-SVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVY 827
Y P +S DD + +F+RS G L+ VPGI GA E + G + + QL F+ L DK+ D V SVE D+F+ +L+ G+NS+R+ IV A+A KVNTW+PG+YDA Y
Sbjct: 6 YDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGA-EILADGEGDDKVTNTYQLIGKFL-ALRGPDKT--DHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSY 122
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.670e-13 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 3
Query: 468 ESGAYSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHG---IETSSQLFAVFMF--GLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
E Y P +S D+ + +F+R G+L+ VPGI A +K+ G + + QL F+ G + K++ ++E DRF+ +LK +G++S+R+ IV A+A K NTW+PG+YD YD
Sbjct: 3 EEAGYDPKRSKVTDEKLAEFIRQPITGELTEVPGIGP-AAVKKLAAGEGSNKVANTYQLIGKFLSLKGGDDSGKTIQ----TIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPGIYDEDQYD 124
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.870e-12 Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHGIETSSQLFAVF-MFGLIEIDKSVADESVSV---ELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVY 827
Y P++S D TM FLRS G ++ VPGI G K ++ G + S ++ F + G + K ++ + + E ++F+ +LK G+ SHR+ IV+A+ K+NT +PG+YDA +Y
Sbjct: 7 YDPSRSKVSDSTMTDFLRSQITGDVTEVPGI---GPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYDASIY 124
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A7R9WSU1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSU1_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.490e-12 Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRSTP--GKLSLVPGI---------KEDGANEKIFMSHGIETSSQLFAVFMFGLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
Y P +S DD ME++ R+TP G LS VPGI + D NEKI + QLF F+ +++ S + S+E T +F+ FLKN G++SHR+ IV+A+A K T+ G+YDA ++
Sbjct: 6 YDPRRSKVSDDRMEEW-RTTPITGDLSEVPGIGPAAIRKLQELDDDNEKI------TNTFQLFGKFL--MLKGPDSDDHQVGSIEHTQKFWEFLKNRGISSHRSAIVKAIAEKSATFFSGIYDAADFE 124
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.960e-12 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHG------IETSSQLFAVFMFGLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
Y P +S DDT F R G+L+ VPGI A + + G + + QL F+ +++ ++ SVE ++F+ +LK G++SHR+ IV A+A KVNT +PG+YDA Y+
Sbjct: 5 YDPRRSKVSDDTFASFQRDALSGELTDVPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFL--MLKGPDEDGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPGIYDASEYE 126
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: W4H2H6_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4H2H6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.670e-11 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 3
Query: 471 SGAYSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHGIETSSQLFAVFM----FGLIEIDKSVADESVSVEL-TDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDA 818
S Y P KS DDT+ FLR+ G L+ VPGI A ++ G + + Q+ F F L++ ++ DE + D F+ +LK+ G++S+R+ IV A+A K+NT +PGVYDA
Sbjct: 3 SDGYDPAKSRIADDTLADFLRAPLTGVLTEVPGIGPAAAKN---LAKGDDPADQITNTFQLMGKFMLLKRNEDDTDEPIDCRTHCDAFWHWLKSKGISSYRSGIVMAIAEKMNTMIPGVYDA 121
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A2D4C4D0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D0_PYTIN) HSP 1 Score: 69.7 bits (169), Expect = 3.600e-11 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 3
Query: 471 SGAYSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHG--IETSSQLFAVFMFGLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDA 818
S Y P KS +DT+ FLR+ G L+ VPGI + + G +E + QL F+ DK+ E D F+ +LK+ G+ ++R+ IV A+A KVNT +PG+YDA
Sbjct: 2 SEGYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVGKLAAGEEGDRVENTFQLIGKFLMLKQSTDKNEDGLIDCAEHCDAFWYWLKSKGIQAYRSGIVMAIAEKVNTMLPGIYDA 120
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A7S4EKZ8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKZ8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.260e-11 Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRSTP--GKLSLVPGIK-------EDGANEKIFMSHGIETSSQLFAVFMF--GLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
Y P KS DDTME + R+TP L VPGI +D + E+ I + QLF F+ G D + E S+E ++F+ +LKN GVN+HR+ IV+AVA K T+ G+YD +YD
Sbjct: 5 YDPKKSKVSDDTMETW-RTTPTTADLQSVPGIGPATIKKLKDASTEE----DRITNTYQLFGKFLMLKGPGHSDDEI--EIDSIEHMEKFWHWLKNRGVNTHRSAIVKAVAEKSATFFQGIYDPNMYD 125
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.300e-11 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRST-PGKLSLVPGIKEDGANEKIFMSHG--IETSSQLFAVFMFGLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
Y P +S +D + FLR+ G ++ VPGI + A I S QL F+ L++ + E V ++F+ +LK+ GVNSHR+ IV A+A K+NT +PG+YD+ V++
Sbjct: 5 YDPKRSSISEDALATFLRNPITGDITQVPGIGKAAAAALASADDDEPITNSFQLIGKFL--LMKGPDTEEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPGIYDSDVFE 122
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Match: A0A7S2MQ62_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQ62_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 7.950e-11 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 3
Query: 480 YSPNKSPTKDDTMEKFLRST-PGKLSLVPGIK--------EDGANEKIFMSHGIETSSQLFAVFMFGLIEIDKSVADESVSVELTDRFYAFLKNLGVNSHRNTIVEAVARKVNTWVPGVYDAQVYD 830
Y P +S + T F R G+L+ VPGI E G EK S I + QL F+ +++ + S+E ++F+ FLK G++SHR+ IV A+A KVNT +PG+YDA YD
Sbjct: 14 YDPRRSKVNESTFANFQREQLTGELTDVPGIGPAAARKLGEIGDEEKD--SDRITNTYQLIGKFL--MLKGPDEDGHKVESMEHMEKFWWFLKEKGISSHRSGIVRAIAEKVNTMIPGIYDASEYD 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.152.1 >prot_P-littoralis_Contig64.152.1 ID=prot_P-littoralis_Contig64.152.1|Name=mRNA_P-littoralis_Contig64.152.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp MFGIPSPFPFVFGRDTSGDSSDSSSSSSSDNDSYSSDNDSEYFSDGNTSAback to top mRNA from alignment at P-littoralis_Contig64:574486..576672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.152.1 ID=mRNA_P-littoralis_Contig64.152.1|Name=mRNA_P-littoralis_Contig64.152.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2187bp|location=Sequence derived from alignment at P-littoralis_Contig64:574486..576672- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:574486..576672- >mRNA_P-littoralis_Contig64.152.1 ID=mRNA_P-littoralis_Contig64.152.1|Name=mRNA_P-littoralis_Contig64.152.1|organism=Pylaiella littoralis U1_48|type=CDS|length=744bp|location=Sequence derived from alignment at P-littoralis_Contig64:574486..576672- (Pylaiella littoralis U1_48)back to top |