prot_P-littoralis_Contig64.127.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.127.2
Unique Nameprot_P-littoralis_Contig64.127.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length431
Homology
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 3.980e-57
Identity = 170/433 (39.26%), Postives = 213/433 (49.19%), Query Frame = 0
Query:   45 VLVDDSRCPGVVGVDVALTNLTVLFGMIVGAALILRVSNRVLNKRRSTKLQKSIFTLPVYVFNGSTRRRSLVLTEARPQSQTPSVSLHGIHEAGPARSSSALASESGSCSSSENG------DNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPAFDKSRIQDRHRHGQA-RVEGLSPAAAAPPLRGSLPSNQLHSPRLDGSGRSRGETGGGLLVMRPSSSPPPHPSA---DVGVVNPPQASAAQQSGGAPGTVESEAGAPVPAKAVE----VGRVEDVR---------------------VALH------VQRGVGAPEETMTETMTASTALDDRELKSGAATTGGGSPVEPADCGGGKGQGNVGFPSE----PCSPCHGGGTRG-----AAPGDGRREVPLSELELGQVGSGK 427
            +L++   CP V G D+   N+T + G +VG AL+L V NRV N+RRS KL+KSIFTLPVYV+N STR R+     ARPQ Q P  S  GI + G ARSS                      D+ S  TC IC++ Y EE+++KVLPCGHDFHSDCLD WL VK +CPLCK PAF KSR +D   HG+A      S  A APPL  S   ++    +LDG  R+ G   GG+  ++PSS  PP  SA    VG     ++   +++G      ESE   P+ A+ +E     G V  VR                      A H         G+GAP         AS  L  R L  G A     +  + AD    +    +G  S     P S   G  T G     AAPG GR EV L ELE GQVG+GK
Sbjct:   14 MLLEVDECPSV-GADIIFKNITGILGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARTARPQLQAPLDSSQGIEDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKAPAFTKSRDRDEVAHGRAVHAINSSAIAQAPPLFRSRSPDESRGSQLDGRPRTEGGVDGGMPPVKPSSPLPPESSARSTQVGANQEERSLPIERAG------ESER-TPLQARVLEGIQQTGEVVPVRPDWDARGESKMADFTADGQPLAAGHNIAPDTAAAGIGAP--------IASAVLGSRPLDVGEAAVTARAGSKAADSCANRQGNELGISSSESNIPPSSERGVKTTGVAQPRAAPGFGREEVSLDELETGQVGTGK 430          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A6H5KUT0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT0_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 6.930e-25
Identity = 115/295 (38.98%), Postives = 134/295 (45.42%), Query Frame = 0
Query:  179 LVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPA--FDKSRIQDRHRHGQA-RVEGLSPAAAAPPLRGSLPSNQLHSPRLDGSGRSRGETGGGLLVMRPSSSPPPHPSADVGVVNPPQASAAQQSGGAPGTVESEAGAPVPAKAVEVGRVEDVRVALHVQRG----VGAPE-ETMTETMTASTALDDRELKS------GAATTGGGSPVE-------PADCG--------GGKG-------QGN-VGFPSE----PCSPCHGGGTRG-----AAPGDGRREVPLSELELGQVGSGK 427
            L+KVLPCGHDFHSDCLD WL VK +CPLCK PA  F KSR +D   HG+A      S  A APPL  S   +     +LDG  R  G+  GG+L MRPSS  PP  SA    V               G ++ E   P+          E  RV    Q+      G P+ +   E+  A  A D + L +        A TG G PVE       P D G        GGK        QGN +G  S     P     G  T G     AAPG GR EVPL ELE GQVG+GK
Sbjct:    5 LIKVLPCGHDFHSDCLDPWLEVKAECPLCKVPAPAFIKSRHRDEVAHGRAVHAINSSAIAQAPPLLRSRSRHASRGSQLDGRRRREGKVDGGMLPMRPSSPLPPESSARSTHV---------------GAIQEERSLPIERAGERTP--EQARVLEGTQQTGEVVPGRPDWDAWGESKMADFAADGQPLAAEHNIALDTAATGIGPPVESAVVGSRPLDVGEAAVTASAGGKAADGCADRQGNELGMASSESNVPQRAESGVNTTGVAQPPAAPGFGREEVPLDELETGQVGTGK 282          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: X6MHP9_RETFI (RING-type domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MHP9_RETFI)

HSP 1 Score: 66.2 bits (160), Expect = 1.190e-9
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:  164 AFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCK 208
            A  C +C++ YVE D++  LPCGH+FH DC+  WL +K  CPLC+
Sbjct:   40 APACAVCMADYVEGDVINTLPCGHEFHKDCVAKWLPIKKICPLCR 84          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A5N3XDM0_MUNRE (RING-type domain-containing protein n=1 Tax=Muntiacus reevesi TaxID=9886 RepID=A0A5N3XDM0_MUNRE)

HSP 1 Score: 70.5 bits (171), Expect = 2.400e-9
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  159 GDNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPAFDKS 215
            G+N     C+ICI+ Y+E +++++LPC H+FH  C+D WLA    CP+C+ P  D S
Sbjct:  526 GENEEFKACSICITEYIEGNILRILPCSHEFHDHCIDHWLAEHITCPICRRPVVDPS 582          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: UPI00032ADABC (E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Ochotona princeps TaxID=9978 RepID=UPI00032ADABC)

HSP 1 Score: 70.5 bits (171), Expect = 2.510e-9
Identity = 24/55 (43.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  159 GDNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPAFD 213
            G+N  + +CTICI+ ++E D++++LPC H++H+DC+D WLA    CP+C+    D
Sbjct:  565 GENDESKSCTICITKFIEGDIIRILPCCHEYHADCIDRWLADNVTCPICRYDVTD 619          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A061S894_9CHLO (E3 ubiquitin-protein ligase RLIM n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S894_9CHLO)

HSP 1 Score: 67.8 bits (164), Expect = 3.170e-9
Identity = 33/87 (37.93%), Postives = 48/87 (55.17%), Query Frame = 0
Query:  157 ENGDNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCK---TPAFDKSRIQDRHRHGQARVEGLSPAAAAPPL 240
            E G+  +  TC++CI  +  ED+V+ LPCGH FH+ C+D WL  +  CP C+     A D S  ++    G  R  G + AAA  P+
Sbjct:  135 EAGEATAGSTCSVCICDFASEDMVRRLPCGHVFHTGCVDPWLQQRATCPTCRWSMVAAGDASSPEESP--GNRRAAGEAAAAAPGPV 219          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A397TX84_9GLOM (RING-type domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397TX84_9GLOM)

HSP 1 Score: 64.3 bits (155), Expect = 4.870e-9
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0
Query:  167 CTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPAFDKSRI 217
            CTIC+S Y   D ++ LPC HDFH +C+DSW     KCP+C+    +   +
Sbjct:   70 CTICLSEYEHNDWLRDLPCAHDFHKECIDSWFKNSDKCPICRRSILENKEL 120          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A7S2ZFW7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFW7_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 5.580e-9
Identity = 38/129 (29.46%), Postives = 56/129 (43.41%), Query Frame = 0
Query:   80 RVSNRVLNKRRSTKLQKSIFTLPVYVFNGSTRRRSLVLTEARPQSQTPSVSLHGIHEAGPARSSSALASESGSCSSSENGDNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCK 208
            R   R+LN+  S+  Q +I  LP+Y+F G+ +R      E                                     E G+  ++F C+ICI+     D +++LPC H FHS+C+D WL    KCP CK
Sbjct:  123 RSQRRILNEFLSSATQATIDRLPMYIFQGTKQREKSEPDE-------------------------------------EAGEAGASFECSICITEVDPGDKMRILPCLHQFHSECVDQWLLANAKCPTCK 214          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A0G4J335_PLABS (RING-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J335_PLABS)

HSP 1 Score: 66.2 bits (160), Expect = 6.010e-9
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  165 FTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPK--CPLCKTPAF 212
            F C+IC+SP+V+ + ++ LPC H FH  C+D W+A+ P   CPLC+ P F
Sbjct:  150 FPCSICLSPFVDGEPLRTLPCFHSFHQSCIDEWIALAPAATCPLCRIPIF 199          
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Match: A0A261XUD0_9FUNG (RING-type domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUD0_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 6.110e-9
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  167 CTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAVKPKCPLCKTPAFDKS--RIQDRHRHGQARVEGLS 232
            C+ICI  Y E + ++VLPC H FH+DC+D WL V   CPLCK    DK+  R  +  +HGQ   + +S
Sbjct:  602 CSICIGEYEETERIRVLPCRHHFHADCVDQWLYVDKSCPLCKHD-IDKTWPREVEMTQHGQLNTQSVS 668          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.127.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ38_ECTSI3.980e-5739.26RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUT0_9PHAE6.930e-2538.98RING-type domain-containing protein n=1 Tax=Ectoca... [more]
X6MHP9_RETFI1.190e-951.11RING-type domain-containing protein n=1 Tax=Reticu... [more]
A0A5N3XDM0_MUNRE2.400e-943.86RING-type domain-containing protein n=1 Tax=Muntia... [more]
UPI00032ADABC2.510e-943.64E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Ocho... [more]
A0A061S894_9CHLO3.170e-937.93E3 ubiquitin-protein ligase RLIM n=1 Tax=Tetraselm... [more]
A0A397TX84_9GLOM4.870e-943.14RING-type domain-containing protein n=1 Tax=Gigasp... [more]
A0A7S2ZFW7_9RHOD5.580e-929.46Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A0G4J335_PLABS6.010e-948.00RING-type domain-containing protein n=1 Tax=Plasmo... [more]
A0A261XUD0_9FUNG6.110e-945.59RING-type domain-containing protein n=1 Tax=Bifigu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 167..207
e-value: 4.7E-8
score: 42.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 166..208
e-value: 5.2E-12
score: 45.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 167..208
score: 13.197422
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 144..213
e-value: 6.4E-18
score: 65.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..430
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 32..212
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 166..208
e-value: 6.3881E-16
score: 69.2529
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 160..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:530907..541573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.127.2mRNA_P-littoralis_Contig64.127.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 529347..542115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.127.2 ID=prot_P-littoralis_Contig64.127.2|Name=mRNA_P-littoralis_Contig64.127.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=431bp
MNISSCSEDSCSSCAREDGCAWCEAGTVSPGRCISLETELCRKDVLVDDS
RCPGVVGVDVALTNLTVLFGMIVGAALILRVSNRVLNKRRSTKLQKSIFT
LPVYVFNGSTRRRSLVLTEARPQSQTPSVSLHGIHEAGPARSSSALASES
GSCSSSENGDNVSAFTCTICISPYVEEDLVKVLPCGHDFHSDCLDSWLAV
KPKCPLCKTPAFDKSRIQDRHRHGQARVEGLSPAAAAPPLRGSLPSNQLH
SPRLDGSGRSRGETGGGLLVMRPSSSPPPHPSADVGVVNPPQASAAQQSG
GAPGTVESEAGAPVPAKAVEVGRVEDVRVALHVQRGVGAPEETMTETMTA
STALDDRELKSGAATTGGGSPVEPADCGGGKGQGNVGFPSEPCSPCHGGG
TRGAAPGDGRREVPLSELELGQVGSGKASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD