mRNA_P-littoralis_Contig64.119.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.119.1
Unique NamemRNA_P-littoralis_Contig64.119.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: D8LQ52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 1.830e-199
Identity = 337/517 (65.18%), Postives = 370/517 (71.57%), Query Frame = 2
Query:  302 TLGRDTPALHPSCSSSPTSMPSSSTGTPHQMLRPAAETTLEDHDSPLNGKPCTLTFRVTGAASVARLEPLLLDHDHRRGNGRLVTWTRARKSGGDAGGNNNDLGARLDFVWETTVSKLRHKQHRNARVLNRLGGAQVLEDKANLVLLQRLMTAPTLESYAVSGRKAVTQWAQLRFQQQHQTPGHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEGNWKSVTEALSDHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLG--KEKDDG-RAGA-VAEGDGVQREGFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGGVWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLTGCSPEPGLFEATAAPASSAVAPSTETWRNVMRFAAFKRSCRTAT 1840
            TL +D  A  PSC S  TS+PS+ T  PH+ +R  AET LED + P  G+P TLTFRVTGA+SVARLEPLLL    R  N R   W+R+  SG D        G R+DFVWETTV+K + ++HR+ARVLNRL GAQVLEDKANLVLLQRLMTAPTLESYAV+GR AV +WAQ RF++Q+                                                                  CVKAA  NGGLDIWVLH+GNWK VTEALS+HESYVIQRYVARPMLW+GRKFHFR YALLRADMSAWLYRTAYILSASRPYSLG    +DDG R GA VA+   + R  FADE VHISNLAVNKHTEGHPGQVPCDLPS+Y ALWP  LE L SL +AATPFM+HQA+PNHFEFLGLDIIAD  GGVWLMEANRLPGLQSSKQNLE+ENEVYDGMMLD+IRLLVLPPLTGCSPE GLFE  A PAS A APSTETWRNVMRFAAFKRSCRT T
Sbjct:   20 TLPKDCCAALPSCLS--TSVPSN-TNAPHRRVRSMAET-LEDRNFP-PGQP-TLTFRVTGASSVARLEPLLLGPGGR--NQRPTIWSRSLDSGDD--------GVRVDFVWETTVTKQQQRRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESYAVNGRNAVARWAQQRFKEQN--------LPRDRPPPPPSTREAGYPHDDQFLARKRALVQGTSAATETTQESEAVGNGHAGEEDWWCVKAAGGNGGLDIWVLHKGNWKMVTEALSEHESYVIQRYVARPMLWQGRKFHFRAYALLRADMSAWLYRTAYILSASRPYSLGGNDSRDDGVRVGAGVAD---MHRAAFADEFVHISNLAVNKHTEGHPGQVPCDLPSEYGALWPKMLELLGSLVDAATPFMQHQANPNHFEFLGLDIIADSAGGVWLMEANRLPGLQSSKQNLEKENEVYDGMMLDLIRLLVLPPLTGCSPEQGLFEVAATPASGARAPSTETWRNVMRFAAFKRSCRTKT 509          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A835Z2B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.900e-52
Identity = 164/482 (34.02%), Postives = 209/482 (43.36%), Query Frame = 2
Query:  461 LTFRVTGAASVARLEPLLLDHDHRRGNGRLVTWTRARKSGGDAGGNNNDLGARLDFVWETTVSKLRHKQHRNARVLNRLGGAQVLEDKANLVLLQRLMTAPTLESYAVSGRKAVTQWAQLRFQQQHQTPGH-------SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEGNWKSVTEALS-----DHESYVIQRYVARPMLWR---GRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPG----------------------------QVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREG--------------------------GVWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLP 1699
            L +RVTGA +V+R+ P+L D D     G  V W  A           +    RLDFV+ETTV+K     HR A VLNRL G+ VLEDKA+  LL R M AP LES+ V G   V  WA+ R+     +          +                        XXXXXXXXX                           CVKAA  NGG D+WVLH GN + +   LS        +YV+QRYVARP+L     G K HFR + +LR D+SAWL+  A +L A  PY+L    D G                    +H++NLA +K   G                               Q  CDLP ++PALWP  L    + A AA P M HQA   HF   GLD +AD  G                          GVWL+EANR+PGL S+++N  ++   Y  +  D++ L VLP
Sbjct:   11 LRYRVTGAGAVSRIRPVL-DTDSVCREGCTVEWQEA-----------SSPDERLDFVYETTVTKDWQAAHRGAVVLNRLCGSVVLEDKASFALLSRRMAAPALESHLVEGSSGVEAWAKARWGPLFNSSSSGDEGGSGAEGNDSSSSGAAACHRCGSREPVGDXXXXXXXXXAAGSLSSGAAAARARCRGAPPREPDWWCVKAARGNGGGDVWVLHAGNAQRLVAQLSRCGGGGGGAYVLQRYVARPLLLPRCGGAKSHFRCFGVLRGDLSAWLHAGACVLRARAPYAL---SDAGNPS-----------------IHLTNLAFSKRPGGXXXXXXXXXXXXXXXXXXXXXXXXXAQRFRPQTACDLPREHPALWPRMLAAWGAAAAAAAPLMRHQASAAHFALFGLDFLADAGGELSXXXXXXXXXXXXXXXXXXXXXXXGVWLLEANRVPGLASTRENWAEDEAFYGALTRDLLDLAVLP 460          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A7S2XVN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN0_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.970e-51
Identity = 116/273 (42.49%), Postives = 153/273 (56.04%), Query Frame = 2
Query: 1040 VKAAXXNGGLDIWVLHEGNWKSVTEALS--DHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGG-VWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLP--------PLTGCSPEPG---LFEATAAPASSAVAPSTETWRNVMRFAAF 1816
            VK +  NGG DIWV+++ N+++V E +S    E  V Q YVARP+L+ GRKFHFR YALL A M  + Y  AYIL+A+  Y L                    E   D + HISN+AVNKH  G+PGQVP  LP+DYP L+    E    +   A+PF+  Q   +HFEFLGLDI+AD +   VWL+E NRLPGLQSSK N  +E+  Y+ MM   + +LV P        P     P+ G   + E    P +  V    + W+NV++FA F
Sbjct:   64 VKVSKGNGGSDIWVINQQNFRAVLEDISAVKEEELVCQEYVARPLLFHGRKFHFRCYALLAASMQGFFYDRAYILAATNQYRL--------------------EQPGDAMTHISNMAVNKHMAGYPGQVPTHLPTDYPQLFERMKELYSEVIRVASPFLAVQRSLSHFEFLGLDIMADADASRVWLLEVNRLPGLQSSKSNQAEEDVTYNTMMSAAMEMLVYPVLKLQPGEPRGPVEPKGGWCPVNEECPTP-TQIVEDHQQGWKNVLKFAMF 315          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A482RWA3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWA3_9ARCH)

HSP 1 Score: 178 bits (452), Expect = 4.730e-45
Identity = 124/431 (28.77%), Postives = 196/431 (45.48%), Query Frame = 2
Query:  461 LTFRVTGAASVARLEPLLLD-HDHRRGNGRLVTWTRARKSGGDAGGNNNDLGARLDFVWETTVSKLRHKQHRNARVLNRLGGAQVLEDKANLVLLQRLMTAPT-LESYAVSGRKAVTQWAQLRFQQQHQTPGHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEGNWKSVTEALSDHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADEL-VHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGG------------VWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLT 1708
            + +R+TG  SV RLEPLL   H   +     + +        +     +    R+ FVWET   K   + H  A VLNRL    +LE K+N   L  L+     LE++     + +  W + R+       G ++                                                            VK +  NGG D+ +++  NW+ V + L + E+ V+Q  V RP+L++GRKFHFR YALL  DM+A+L+R  +IL++S PY+  +                  E +A  L +H++NL++NK   GHPGQ+PC+LP+DYP ++         + +AA P++  Q    HF+F GLD++  R               V ++E NRLPGL+SS  N + E+ +YD MM   +R+++ P ++
Sbjct:    5 IEYRITGKRSVERLEPLLHQIHPALK----FLPYQNCDSLANEG----STCAQRMGFVWETYCEKTYWELHNRAVVLNRLHNNAILESKSNFAYLGHLVQEHRMLETFVARNSEELLNWIERRW-------GSAAVPRDGDDDGDDERDWW-------------------------------------------AVKVSAGNGGRDVHIMNRQNWRYVLQGLPNEEA-VLQECVPRPLLYQGRKFHFRCYALLMGDMAAYLHRHCFILTSSLPYNPLEPC-------------TSSEQYASRLRMHVTNLSINKKFTGHPGQIPCNLPADYPDVFLRLSSLWAEIVQAARPYLRCQRSRRHFDFYGLDVVCSRPSSAHHNDDSGAVSEVHVIELNRLPGLESSALNTQAEDALYDEMMRQALRIVLAPEIS 363          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: W7TQE7_9STRA (Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.010e-38
Identity = 151/523 (28.87%), Postives = 216/523 (41.30%), Query Frame = 2
Query:  452 PCTLTFRVTGAASVARLEPLLLDHDHRRGNGRLVTWTRARKSGGDAGGNNNDLGARLDFVWETTVSKLRHKQHRNARVLNRLGGAQVLEDKANLVLLQRLMTA-----PTLESYAVSGRKAVTQWAQLRFQQQHQTPGHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKAAXXNGGLDIWVLHEG-NWKSVTEALSDHESYVIQRYVARPMLWRGR-KFHFRVYALLR------------------ADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIA-------------DREGGVWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLTGCSP-------------------EPGLFEATAAPASSAVAPSTETWRNVMRFAAFKRSCRTATSLA 1849
            P  L +R+TGAA+ AR+ PLL +          V W   R        N  D    LDFVWET V++     H  ARVLNRL    +LE+KA    +  L+++     P LE+  V    A   W   R ++Q +T  +++                                                            +KAA  NGG D+ VL           AL   +SYV+QRY+ RP+L   + KFH+RVYALLR                  A    W+Y+  +IL AS  Y         + G+  E          D   H++NL++NKH  G+PGQ+P DL +  P  +     +  ++  AA PF+  QA   HFE  GLD +              D+   ++LME NRLPGLQSS+QN   E+E+YD M+ +++ L V+P L+G                      +  +F   A+P         E   NV+R+A   R+CR +   A
Sbjct:   19 PTHLIYRITGAAAQARIVPLLQERAE-------VHWIAGRCQNAC---NQADPPVPLDFVWETHVARRDKPLHDCARVLNRLSNTVILENKAYFSHILALVSSQNQDIPVLETAVVRAMDAQA-WLDAR-RRQLRTVQNANYTVFTDCTEDAEEWWI--------------------------------------------LKAAGANGGGDVHVLPPACTHVPACIALRPLDSYVVQRYITRPLLLEKKYKFHYRVYALLRMTGVEETGRTSVDREARRARFQPWIYQHGFILRASERYHHAT-----KCGSANE---------IDAAAHLTNLSLNKHCPGYPGQLPIDL-ARAPRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDYLPVEAACAPEDMMHLDKFDSMYLMEINRLPGLQSSRQNSADEDELYDCMIRELLDLCVMPFLSGTGAKNDHESKQGGWSEVVIKDVDENMFVDLASPGDK------EIHHNVLRWAMHMRACRNSVKTA 464          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A7S3Y052_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y052_HETAK)

HSP 1 Score: 149 bits (375), Expect = 2.120e-37
Identity = 83/200 (41.50%), Postives = 111/200 (55.50%), Query Frame = 2
Query: 1223 MSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGGV-WLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLL-VLPPLTGCSPEPGLFEATAAPASSAVAPSTETWRNVMRFAAF 1816
            +  + Y  AYIL+A RPY LG   DD                    L HISN+AVNKH  G+PGQ+PC +P ++PALW    E    L  AA PF++ QA+  HFEF GLD +AD +G   WL+E NRLPGLQ+S  N   E+++Y+ M+ D++ L+ V  PL G +    L++ TA P          TW+N   F AF
Sbjct:    7 LQPYFYEMAYILTAMRPYRLGAPSDD--------------------LRHISNMAVNKHEAGYPGQIPCRVPVEFPALWASMTEVWAELVRAAAPFLQVQANARHFEFYGLDFLADADGETAWLLEVNRLPGLQASAANKAAEDQMYNKMIADLLELIGVSLPLEGTN----LWQPTAQPEEEVEVNPKMTWKNTFNFKAF 182          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A4D9DE03_9STRA (ADP,ATP carrier protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE03_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.780e-25
Identity = 86/240 (35.83%), Postives = 115/240 (47.92%), Query Frame = 2
Query: 1040 VKAAXXNGGLDIWVLHEG-NWKSVTEALSDHESYVIQRYVARPMLWRGR-KFHFRVYALLR------------------ADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIA-------------DREGGVWLMEANRLPGLQSSKQNLEQENEVYD 1660
            +KAA  NGG D+ VL           AL   +SYV+QRY+ RP+L   + KFH+RVYALLR                  A    WLY+  +IL AS  Y         + G+  E          D   H++NL++NKH  G+PGQ+P DL +  P  +     +  ++  AA PF+  QA   HFE  GLD +              D    ++LME NRLPGLQSS QN   E+ +YD
Sbjct:   38 LKAAGANGGGDVHVLPPACTHVPACIALRPLDSYVVQRYITRPLLLEKKYKFHYRVYALLRMTGVEETGHTSVDGEARRARFQPWLYQHGFILRASERYHHAT-----KCGSANE---------IDAAAHLTNLSLNKHCPGYPGQLPIDL-ARAPRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDFLPVEPARAPEDMMRLDEFDSMYLMEINRLPGLQSSPQNSADEDGLYD 262          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A7S0JK46_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JK46_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 6.020e-16
Identity = 68/201 (33.83%), Postives = 93/201 (46.27%), Query Frame = 2
Query: 1136 YVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQRE-GFADELVHISNLAVNKHTEGHPGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGGVWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLTGCSPEPGLF 1735
            YV+Q YVA PML  GRKF  R Y LLR D SA+ Y  A +  AS  Y L     D RA    +   VQ + G ++EL  +  + +        G+V   L      L    +++L  L  A    +   + P HFE    D+I   +    LME N  P   +      +   + + M  D+++LLVLP  TGCSP PG F
Sbjct:    4 YVLQEYVASPMLLGGRKFEMRQYLLLRGDGSAYTYERALLRLASVQYELSSA--DRRAHITNKW--VQTKWGTSNELCTLEQIEMVSTEWAQYGEV---LGRSIVPLLQDLVDSLSPLLAAGRARVPQSSSPFHFELFACDLIVSDQAQAKLMEVNINPAFGTFTAATRER--LIEPMFADLVKLLVLPAATGCSPRPGRF 195          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: A0A7S2JRS2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRS2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.060e-14
Identity = 79/294 (26.87%), Postives = 128/294 (43.54%), Query Frame = 2
Query: 1040 VKAAXXNGGLDIWVLHEGNWK-----SVTEALSDHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKH-TEGHPGQVPCDLPSDYPAL-------WPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDIIADREGG--------------VWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLT-GCSPEPGL------FEATAAPASSAVAPSTETWRNVMRFAAFK 1819
            +K A  NG   IW++ + N+      S    L ++  YV Q+Y   P+LW GRKFH RVYA+L AD  A+++R A++  A+  +       D RA               ++ VHI+N   N    E   G++  D      A        +P   E  R +  +A PF++       FE++GLD I                     +L+E N  P  Q +   L+    +++ ++ D+++L +LP        E G       F +T+  A+S+  PS  T+ N MR+  F+
Sbjct:  169 IKDAASNGAGGIWIMSKNNFTNFLPLSNDSPLIENHKYVAQKYAFPPLLWHGRKFHVRVYAVLTADGQAYIHRRAFLHVANEMF-------DARACNTE----------TEDRVHITNCCANSDDVEKFAGEICIDFEDSADATSVIIASYFPSIQEAFRDVVSSAWPFVKGGEVNGGFEYMGLDFILSSTKDPAYASAECMKSNPVAYLLEINAPPS-QDTATGLDHAEGLHNEVLSDLVKLWILPKADDNFQSELGGWRRVLDFHSTSTVAASSSLPSKRTFLNQMRWVTFE 444          
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Match: F0XVE3_AURAN (Aminotran_5 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE3_AURAN)

HSP 1 Score: 80.1 bits (196), Expect = 1.240e-11
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 2
Query: 1040 VKAAXXNGGLDIW-VLHEGNWKSV--TEALSDHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYILSASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGHPGQ--VP----CDLPSDYPALWPGFLENLRSLAEAATPFMEHQA-DPNHFEFLGLDIIADREGG---VWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVL 1696
            VK A  N G+ +W     G+  ++  ++A+      V+Q+Y+ RPMLWRGRK  FRVYA+ +   S +LY  A     + PY+         AG    G             H++N++VNK  +   G   VP     DL + +PA +      LRSL+ A  P +   A   N FE +G+D + D +      WL+E N  P    S      E   +  +M+DV+   V+
Sbjct:  139 VKDATANSGVGLWFAASPGDLAALAASDAVDARGEVVLQQYLERPMLWRGRKLQFRVYAVWQGR-SCFLYAGAMAQVCAAPYAAPV------AGEALAG-----------TAHVTNVSVNKDADEAAGGAFVPERPILDLAAAHPAQFAAMKRVLRSLSRACAPGLAPAAAGRNRFELVGVDFLCDDDAADPHAWLVECNCPPNSAGSAAEGPIE-AFHHALMVDVLDRFVV 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ52_ECTSI1.830e-19965.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2B8_9STRA4.900e-5234.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVN0_9STRA3.970e-5142.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482RWA3_9ARCH4.730e-4528.77Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W7TQE7_9STRA4.010e-3828.87Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis ga... [more]
A0A7S3Y052_HETAK2.120e-3741.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9DE03_9STRA5.780e-2535.83ADP,ATP carrier protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0JK46_9EUKA6.020e-1633.83Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2JRS2_9STRA1.060e-1426.87Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0XVE3_AURAN1.240e-1130.17Aminotran_5 domain-containing protein n=1 Tax=Aure... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:505185..510658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQ52
Preferred nameTtll2
PFAMsTTL
Model size2637
Max annot lvl2759|Eukaryota
KEGG koko:K16608
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.17e-203
EggNOG OGsKOG2157@1|root,KOG2157@2759|Eukaryota
Descriptionprotein polyglycylation
Cds size1494
COG categoryS
BRITEko00000,ko01000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.119.1prot_P-littoralis_Contig64.119.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 505543..509873 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791335.6096413-UTR-P-littoralis_Contig64:505184..5055421680791335.6096413-UTR-P-littoralis_Contig64:505184..505542Pylaiella littoralis U1_48UTRP-littoralis_Contig64 505185..505542 +
1680791335.7109106-UTR-P-littoralis_Contig64:509873..5106581680791335.7109106-UTR-P-littoralis_Contig64:509873..510658Pylaiella littoralis U1_48UTRP-littoralis_Contig64 509874..510658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791335.6267335-CDS-P-littoralis_Contig64:505542..5058931680791335.6267335-CDS-P-littoralis_Contig64:505542..505893Pylaiella littoralis U1_48CDSP-littoralis_Contig64 505543..505893 +
1680791335.6417365-CDS-P-littoralis_Contig64:506225..5066631680791335.6417365-CDS-P-littoralis_Contig64:506225..506663Pylaiella littoralis U1_48CDSP-littoralis_Contig64 506226..506663 +
1680791335.6519272-CDS-P-littoralis_Contig64:507055..5073251680791335.6519272-CDS-P-littoralis_Contig64:507055..507325Pylaiella littoralis U1_48CDSP-littoralis_Contig64 507056..507325 +
1680791335.6621575-CDS-P-littoralis_Contig64:508128..5083061680791335.6621575-CDS-P-littoralis_Contig64:508128..508306Pylaiella littoralis U1_48CDSP-littoralis_Contig64 508129..508306 +
1680791335.677852-CDS-P-littoralis_Contig64:508984..5091271680791335.677852-CDS-P-littoralis_Contig64:508984..509127Pylaiella littoralis U1_48CDSP-littoralis_Contig64 508985..509127 +
1680791335.6906114-CDS-P-littoralis_Contig64:509759..5098731680791335.6906114-CDS-P-littoralis_Contig64:509759..509873Pylaiella littoralis U1_48CDSP-littoralis_Contig64 509760..509873 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.119.1

>prot_P-littoralis_Contig64.119.1 ID=prot_P-littoralis_Contig64.119.1|Name=mRNA_P-littoralis_Contig64.119.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=498bp
MPSSSTGTPHQMLRPAAETTLEDHDSPLNGKPCTLTFRVTGAASVARLEP
LLLDHDHRRGNGRLVTWTRARKSGGDAGGNNNDLGARLDFVWETTVSKLR
HKQHRNARVLNRLGGAQVLEDKANLVLLQRLMTAPTLESYAVSGRKAVTQ
WAQLRFQQQHQTPGHSSPPPPPPQQPAPEGVLLHKERGRRREQTPTQDST
AVAAVPGTAAAAAAINDGGAGGEDWWCVKAAGGNGGLDIWVLHEGNWKSV
TEALSDHESYVIQRYVARPMLWRGRKFHFRVYALLRADMSAWLYRTAYIL
SASRPYSLGKEKDDGRAGAVAEGDGVQREGFADELVHISNLAVNKHTEGH
PGQVPCDLPSDYPALWPGFLENLRSLAEAATPFMEHQADPNHFEFLGLDI
IADREGGVWLMEANRLPGLQSSKQNLEQENEVYDGMMLDVIRLLVLPPLT
GCSPEPGLFEATAAPASSAVAPSTETWRNVMRFAAFKRSCRTATSLA*
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mRNA from alignment at P-littoralis_Contig64:505185..510658+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.119.1 ID=mRNA_P-littoralis_Contig64.119.1|Name=mRNA_P-littoralis_Contig64.119.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5474bp|location=Sequence derived from alignment at P-littoralis_Contig64:505185..510658+ (Pylaiella littoralis U1_48)
TGGGGCAGTTCCTCAGAGTTGCCGTGGGGTTGTCGTGCTCCCCACGCCGC AAACACGTGACATTCATTGAGGAAACATCACTGCCTTCCCTGTCATCCTT TGATCCGCTGCTCGCTATTTGCTGAACAGGCTATCTACTGTGTCGAACTC GCAGACCGCCGAACCAAAAATCTTCAACAAAATATATTCTTGTAGCTCTC CGGATCGCGGTGGATCAAGCAGCAGCCACCGCGTGCCATCATTGTACCAA CAGCAGCAGGACGTGCCGCCCGCGTCATCAAACAAAGACCAGGCGCTCCC GACACTAGGACGAGATACTCCCGCTCTACACCCGTCATGCTCATCCTCGC CGACATCTATGCCATCATCATCAACAGGTACCCCACATCAAATGCTACGG CCGGCGGCGGAGACAACACTCGAAGATCACGATTCACCGTTGAACGGTAA ACCTTGCACCTTGACCTTCAGAGTCACCGGAGCCGCGTCGGTGGCCCGCC TGGAACCGCTTCTTCTTGACCATGACCACCGCCGGGGAAATGGTCGGCTA GTCACCTGGACGCGAGCGCGCAAGAGCGGTGGGGATGCCGGCGGGAATAA CAATGATTTGGGAGCTCGCCTTGATTTCGTGTGGGAGACGACCGTTAGCA AGCTGAGGCACAAACAGCATCGAAACGCCAGGGTGTTGAACCGCCTCGGC GGCGCGCAGGTGTGTCTTGTCTTGCATCGAGCGCTTTTGAACCGAGAGTC CCTATTGATCGGCCAGTGCACACATGTGTCGTGCCCCTCATCTTCCTCGA ATGTCTGTATACTTTGCACACCCCTGTATATCAAAGTCATCGCTTTTGAG AGCTACTGCTGCTGTTTTCCGTATCCGAAGCAGGATTGTACAATTCCCTT CACACTCTCTTGGAAATTGCCTGTGTGCTACGGAGTGTTCCCATCATATC TATCTACAGAGAAAATTGTGCCGACCAGTAAGATCTCCTCGTCTTACTGC ATCCCGTCGCACCGCTATACCTCCTGGTCTGGTCGTGTGAGGTGCTAGAA GACAAAGCCAACCTCGTGCTGCTGCAGCGGCTCATGACGGCCCCCACCCT AGAGTCCTACGCCGTCAGCGGGCGAAAGGCGGTCACTCAATGGGCCCAAC TGCGTTTCCAGCAGCAACACCAAACACCAGGCCATTCCTCGCCGCCGCCA CCACCACCTCAACAACCTGCCCCCGAAGGCGTGTTATTACACAAAGAGAG GGGTCGGAGGCGTGAACAGACCCCAACGCAAGATTCAACGGCGGTGGCAG CGGTGCCGGGAACGGCAGCAGCAGCGGCTGCGATCAACGATGGCGGGGCA GGCGGGGAGGACTGGTGGTGCGTAAAAGCGGCTGGGGGGAACGGGGGGCT GGACATTTGGGTTCTGCACGAGGGGAACTGGAAGTCGGTCACGGAAGCGC TCAGCGACCACGAGAGCTACGTCATTCAGGTTCGGACGGGGGCGGGTGGG AGGCTGGGCATGGCACGCGTCCGTTTCTTCGAGTATATTGCGGCGCGATG TACTGCTGCGAGTATAGTGCGGTAGAGATGCTGTGGAATAATACTGTTCG TTTCACTGGCATGATGGCACTTTCAGGACGGTTTTGGTTGTGCTGGGCAG GTTAATTCCACCCGCGTCTCCGAAGATTTTTTGTGGGGAGAAAAAGGTCC GTCCGGCATGCCACATACGGCAGTCGACAAGATGCCTTATCACGTGTCTC CCACACGATATAAGGTCAGAACTGCCGCTTATCAACAGAGCGTCACTCAA GACGACTACCCTTAATATTTCCACCTCTCCTCTGCTGCTTCGCCGCTTGC GGTGTGTCCTGTTTTCATCAGCGGTACGTGGCAAGACCGATGCTTTGGCG GGGGCGAAAGTTCCACTTCCGGGTGTACGCCCTCCTGCGCGCCGACATGT CGGCGTGGCTTTACCGCACGGCCTACATTCTGTCGGCGAGCCGACCCTAC TCTCTGGGGAAGGAGAAGGACGATGGCAGGGCCGGTGCGGTGGCCGAGGG TGACGGTGTGCAACGAGAGGGCTTTGCAGACGAGCTCGTGCACATCAGCA ATCTCGCAGTGAACAAGCACACCGAGGGTCACCCGGGGCAGGTCAGTTGT GACTGTTCTCGACAGGCTGCTCGCTCCCTTGCATTTTGTATGCCATATTC GGCGTGCCGTGCTCCCTACCTTCAGCTTGTTTCCCTTGACCTCGAAAGCG CTGTTCTTTATGCTTTCGTGGTCCTCCTCTGGGCCGTATGATTGTGCCGT GGAAGGCGCCACGCGCGAAGGAACCTCTGCTCATATATGTATAAGCCCTT TCTCCTACATGGTGGGAAGTACATGAGAGGGCCACAGCGCACGGAACTGC CAGAACAAGGCAATTGACATGTGTGTTTGTGTATGTGTCTGCTCCTGGGT GCTACTGCAGTACACCGAAATTCAGCACACATACCTGGCGAAGGGATCGC AGCCGAGAGCATCGTCATGGTCAACGATTATCGTCGTTCCTTGAACTCGT TTGACGTGCACGAATACACACCCCGGCCGATTTCCGAACTTCCTCTCGGG CGTGAAACACATTATTTGGGTCATCAAAAAAGGACTTTCACCTGTGATAG TATTTGTGTGTATGTACGAAATCATCCCCCGGGGTAGAACCGCGACCATA TATCATACTTGTATTTAACCTGCAGTGAATATGTGGACGACTGTGAGGAC CGCGCGGCTCGCCAGCCCCCGTCCGTTCGCCATCATCCCCACGGCGACTG CGTGGCTGCATGGCTCTACAGATGCACACCACTGAGCTGCACTCCGTTTG CTCTTTCGTCGACAGGTTTAGAATACCCCCCTCTCCATATGTATGAAAGG CTTATCCTCCACTCTTGCATGATATGTGTCGACTGTACCGGTAGGTCCCT TGCGACCTCCCCAGCGATTACCCCGCTTTGTGGCCGGGATTTCTCGAAAA CCTGCGGTCTCTCGCAGAGGCCGCGACGCCTTTCATGGAGCACCAGGCCG ACCCTAACCACTTCGAGTTCCTGGGGTTGGATATTATCGCGGACAGGGAG GGTGGAGTTTGGCTTATGGAAGGTGAGAGCTTCGGTGTGGTCGTTGTTGC TGCTGCTTCTGCTGCTGCCGGCTGTTGATTGTTTTAGGTTTCGGGGTAGA GTGTCATCGCAAAACGTGTCCAGATGCACACATATGTACTGAACCACTAG TTAACCACTAGTTTGCGCCGACTAGTTCCTTTTGTTAAGATGCATACACA CCCACTGAACCACTAGTGGTTCATTCAGTGGATATGTGTACTTCTTGACG CAAAGTACAGGAGTGACCTAAACAGCGTGTAGAGGGTAGAATCCGTAGGG TCGTGTAAAACTTTGGCGTTAAGTGCGGTGGTGCCGCGAAGCACCGTTGT TGTTGCTGTTGTGTCACCAGCTGGTCTTGGTTGCGGCGAAGCGTCAACGC GGCCTTGTGGGGAGGGAATAGGCCGTCAATGGAGTCTTTCGCCATGCATG CCAAGGAGAGATCCGCCCAGAGCACGCAACACCTGGTTGAACAAAGTTCG GATCGCATGGTAGATGAAATGATTCTTGGTACATACCTGGCACGACATAT GATACAGTGCATCAATGTGTGCGCGTTGGTGTGGATGTAAAACGCTCGCG GAATATCTCTCTTGGCTGATGGCGCGACGTTCGAACCTGCTGCTGGTACG CTCAATTGCTTGGTACCCACGTGTCTTGTCGCTCGTGCCTGGGGTGACAG CGAACCGGTTGCCTGGACTGCAGAGCTCTAAGCAGAACCTGGAACAAGAG AACGAGGTATACGATGGAATGATGCTGGACGTCATCCGACTCCTGGTGCT GCCGCCCCTCACTGGTTGTTCACCCGAACCGGGGCTCTTCGAGGTCGGTG CTGGTAGGCAACAACTCATTCCCCACTTTTCGTAGATGAAAAGCCCCTCA TACTTTCATTATCGGGACCGATATGAAACAGAACAAACGTTTTTTTTTGT CAAAAAACGTGTTTGACGTGCCTCTGCCGTAGAGCTTTTTACAGCATTCA GAGGCTGGTGCAAAATTCTGCCAGCAGCAGTCCCATGGCAACGACCCCGG TACCTTCAAAAAGTTGACCGGCTGCCTTCCACAATTCTGTGACGTATCCA GCGCCACAAAAATTGTGTCCTTTATCGGTAGCTTGATGTCAAAGGTCCAA GAGGCAGCAATGCGCCACGACGGTAGTCATGGGATCGGTTTGTTAGAGGA ACCAGCAAGACGACAGGAGTTCAGAAAATCAACAAAACGATTGTGTATGG TATTGGTTTGGCTTCAATCGCAATGGATGCACGCAATGTGGACCTACTTC GATTGTTGAGTACCCCCGCGTGGCTGTTGTGTCGGCTCAGATCGACTTTG TTTTACTTTCTTCGACGCCGTCGCATTCCATTGCTCGCATTGTTTTACTC ATCAAAATACCCAACTCTTTCGCCATGGATGCATGATTCTACGGCCGGCG GCGTATTGATATTGTTTTTCTTCAGGCTACTGCCGCACCAGCTTCGAGTG CAGTAGCGCCGTCCACGGAAACGTGGAGGAACGTGATGCGATTCGCGGCT TTCAAGCGATCCTGCCGAACCGCAACATCTCTAGCGTGACGCTATCGCTC TCGGTGTACAGAAGGCACATGGTAGTCAAGTTCGAGAAATTGTGGCAATG GGATGGGAATCACAGTAAAGAAGTGCGCGTTTTGTCACGAATTCACGTGT GGATTTATGTGTATGAATAGCCTCGTCGGTACGGAAATGTGTTATCACGA GTGTACATACATAAATAAATATAGGGATGTGGGTTTCTCAGCTGTCATAA GCGCATGTTTATCGGCTTCTACCTGGTGCGCGCCCGTTGTGTGCCTTGGA GCTAGTACGATTACTCACGAATTCCGAAACCGCGAAAAAAGGGCCCGAAA GTGGCGACAATTCCTAGAATCGGAGGCGAGTGTCTCCTGGCGACAGTAGT TGTAGACGTTGGGGCGAGTGTCTGCCATGGGGCGTGTGCCACATGTTTGT CTGCCACGGAGAAACTGCAGCACAGGCGTTAGCCCTCCGAGTGTGCCATC ACAGACAGTAGTAAAATACTTCGAGAAGGAAAGAGCGATAGCGTTGTAAG CGCCGTATAGCCGACGGACGGCTGGGGCCGGGACGTGGGGCCTTTGGTGA TAAGTACCAACGAACCGAATCGCCACCTCCCGCTAGTCTGTAGATGGCGC CCGCTGTCCAAGAAACGAAAAATTCGGCTTTTTCCGCGGCAGTATTATCA AGTCCCGGGTGTGCAGAATTTATTTCATTTGTGTACAAGAATATATACAG CAGTAGAAGCATCAGACACTGCGGTACTTTTTGTTATCGGTATTCCACCG AGTCATTCGATGAATCGATACCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:505185..510658+

>mRNA_P-littoralis_Contig64.119.1 ID=mRNA_P-littoralis_Contig64.119.1|Name=mRNA_P-littoralis_Contig64.119.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1494bp|location=Sequence derived from alignment at P-littoralis_Contig64:505185..510658+ (Pylaiella littoralis U1_48)
ATGCCATCATCATCAACAGGTACCCCACATCAAATGCTACGGCCGGCGGC
GGAGACAACACTCGAAGATCACGATTCACCGTTGAACGGTAAACCTTGCA
CCTTGACCTTCAGAGTCACCGGAGCCGCGTCGGTGGCCCGCCTGGAACCG
CTTCTTCTTGACCATGACCACCGCCGGGGAAATGGTCGGCTAGTCACCTG
GACGCGAGCGCGCAAGAGCGGTGGGGATGCCGGCGGGAATAACAATGATT
TGGGAGCTCGCCTTGATTTCGTGTGGGAGACGACCGTTAGCAAGCTGAGG
CACAAACAGCATCGAAACGCCAGGGTGTTGAACCGCCTCGGCGGCGCGCA
GGTGCTAGAAGACAAAGCCAACCTCGTGCTGCTGCAGCGGCTCATGACGG
CCCCCACCCTAGAGTCCTACGCCGTCAGCGGGCGAAAGGCGGTCACTCAA
TGGGCCCAACTGCGTTTCCAGCAGCAACACCAAACACCAGGCCATTCCTC
GCCGCCGCCACCACCACCTCAACAACCTGCCCCCGAAGGCGTGTTATTAC
ACAAAGAGAGGGGTCGGAGGCGTGAACAGACCCCAACGCAAGATTCAACG
GCGGTGGCAGCGGTGCCGGGAACGGCAGCAGCAGCGGCTGCGATCAACGA
TGGCGGGGCAGGCGGGGAGGACTGGTGGTGCGTAAAAGCGGCTGGGGGGA
ACGGGGGGCTGGACATTTGGGTTCTGCACGAGGGGAACTGGAAGTCGGTC
ACGGAAGCGCTCAGCGACCACGAGAGCTACGTCATTCAGCGGTACGTGGC
AAGACCGATGCTTTGGCGGGGGCGAAAGTTCCACTTCCGGGTGTACGCCC
TCCTGCGCGCCGACATGTCGGCGTGGCTTTACCGCACGGCCTACATTCTG
TCGGCGAGCCGACCCTACTCTCTGGGGAAGGAGAAGGACGATGGCAGGGC
CGGTGCGGTGGCCGAGGGTGACGGTGTGCAACGAGAGGGCTTTGCAGACG
AGCTCGTGCACATCAGCAATCTCGCAGTGAACAAGCACACCGAGGGTCAC
CCGGGGCAGGTCCCTTGCGACCTCCCCAGCGATTACCCCGCTTTGTGGCC
GGGATTTCTCGAAAACCTGCGGTCTCTCGCAGAGGCCGCGACGCCTTTCA
TGGAGCACCAGGCCGACCCTAACCACTTCGAGTTCCTGGGGTTGGATATT
ATCGCGGACAGGGAGGGTGGAGTTTGGCTTATGGAAGCGAACCGGTTGCC
TGGACTGCAGAGCTCTAAGCAGAACCTGGAACAAGAGAACGAGGTATACG
ATGGAATGATGCTGGACGTCATCCGACTCCTGGTGCTGCCGCCCCTCACT
GGTTGTTCACCCGAACCGGGGCTCTTCGAGGCTACTGCCGCACCAGCTTC
GAGTGCAGTAGCGCCGTCCACGGAAACGTGGAGGAACGTGATGCGATTCG
CGGCTTTCAAGCGATCCTGCCGAACCGCAACATCTCTAGCGTGA
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