mRNA_P-littoralis_Contig64.115.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.115.2
Unique NamemRNA_P-littoralis_Contig64.115.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: D8LQ51_ECTSI (Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ51_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 1.170e-172
Identity = 252/302 (83.44%), Postives = 273/302 (90.40%), Query Frame = 3
Query:  171 GGIRWPTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAK 1076
            G IRWP +VSLVEVGPRDGLQNE S VPT VKVELIDRL+AAGC  IEAASFVSPKWVPQMADG ++LA + R  GVKYAALTPNLRGLE AL+AG DEVAVFAAASEAFS+ANINCSI ESL+RFKPVMEKAK   LPVRGYVSCVLGCPYEGRVAP AV EVA SL+DMGCYSVSLGDTIGAGTAGSTL L+E+L+ AG+P EK A+HFHDTYGQALANILVA+EEG+TV DTSVSGLGGCPYAPGA GNVATEDVVYMLDGMG+NTG+DLDLLL+ SLYIS++LGRPPQSRVARAM AK
Sbjct:   32 GAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGDQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSSANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLETLREAGVPLEKVAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAK 333          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT)

HSP 1 Score: 400 bits (1027), Expect = 1.450e-133
Identity = 197/296 (66.55%), Postives = 239/296 (80.74%), Query Frame = 3
Query:  177 IRWPTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARA 1064
            ++ P  V +VEVGPRDGLQNE +MVPT VKVEL+DRLSAAG G++EAASFVSPKWVPQM D +++LA I R  GV+YAALTPNL+GLE AL A  DEVAVF AASE+FS  NINCSI ESLDRF PVME+A+A  LPVRGY+SCVLGCPYEG +AP+AV EVA+ L  MGCY +SLGDTIG GT      ++ ++ A  +P +K A+HFHDTYGQALANIL A++ GV V D+SV+GLGGCPYA GA GNVA+EDV+YML+G+G+ TG+DLD L+ A  +IS+ +GRP  S+VARA
Sbjct:    1 MQLPNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAV-AERVPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: UPI0004212E15 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004212E15)

HSP 1 Score: 396 bits (1018), Expect = 3.330e-132
Identity = 199/296 (67.23%), Postives = 236/296 (79.73%), Query Frame = 3
Query:  177 IRWPTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARA 1064
            +R P  V +VEVGPRDGLQNE +MVPT VKVEL+DRLSAAG  ++EA SFVSPKWVPQMAD +E++ AI R  G +YA LTPNL+GLE AL+A  DEVAVF AASE+FS  NINCSI ESL+RF PVME+A+A  +PVRGYVSCVLGCPYEG +AP AV  VA  L++MGCY VSLGDTIG GT G    ++ ++ A  +P EK A+HFHDTYGQALANIL A+E GV V D+SV+GLGGCPYA GA GNVA+EDV+YML+G+GV TG+DLD L+ A  +I E LGRP  S+VARA
Sbjct:    1 MRIPARVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLPVVEAGSFVSPKWVPQMADSAEVMQAIARRPGTRYAVLTPNLKGLEGALEARADEVAVFGAASESFSRKNINCSIAESLERFAPVMERARAAGVPVRGYVSCVLGCPYEGEIAPAAVAGVAARLMEMGCYEVSLGDTIGTGTPGKAQAMIAAV-AERVPPEKLAVHFHDTYGQALANILAALEMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGVETGVDLDALIAAGAFIGEALGRPTASKVARA 295          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: UPI0016659C4E (hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI0016659C4E)

HSP 1 Score: 396 bits (1017), Expect = 5.420e-132
Identity = 195/297 (65.66%), Postives = 240/297 (80.81%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAK 1076
            P+ V +VEVG RDGLQNE ++VPT VK+ LI++L+AAG   +EA +FVSPKWVPQMAD +E++A + R  G +Y  LTPN++GLE AL AG DEVAVF AASEAFS  NINC+I ESLDRF+PV++ A+A    VRGYVSCVLGCPYEG +AP  V EV+++L+DMGCY VSLGDTIG GTAG    L+E++ A  +P E+ A+HFHDTYGQALANIL A+EEG+ V D+SV+GLGGCPYA GA GNVATEDV+YML GMG+NTG+DLD +LEA  +IS+QLGRPP  RV+RAM A+
Sbjct:    4 PSDVRIVEVGARDGLQNEKAVVPTAVKIALIEQLAAAGLPAVEATAFVSPKWVPQMADHAEVMAGLTRRPGTRYPVLTPNIKGLEAALAAGADEVAVFGAASEAFSKRNINCTIAESLDRFRPVVDAARAAGAEVRGYVSCVLGCPYEGEIAPEKVAEVSKALLDMGCYEVSLGDTIGVGTAGRVHRLIETVSAV-VPRERLAVHFHDTYGQALANILAALEEGIAVVDSSVAGLGGCPYAKGATGNVATEDVLYMLHGMGINTGVDLDAVLEAGWFISDQLGRPPVGRVSRAMRAR 299          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: G7Z9X9_AZOL4 (Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospirillum TaxID=191 RepID=G7Z9X9_AZOL4)

HSP 1 Score: 395 bits (1016), Expect = 6.670e-132
Identity = 198/293 (67.58%), Postives = 234/293 (79.86%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARA 1064
            P  V +VEVGPRDGLQNE SMVPT VKVEL+DRLS AG  ++EAASFVSPKWVPQM D +E+LA I R  GV+YAALTPNL+GLE AL A  DEVAVF AASE+FS  NINCSI ESLDRF PVME+AKA  +PVRGYVSCVLGCPYEG +APRAV +VA+ L  MGCY +SLGDTIG GT      ++ ++ A  +P EK A+HFHDTYGQALANIL A++ GV V D+SV+GLGGCPYA GA GNVA+EDV+YML+G+G+ TG+DLD L+ A  +I + +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKSMVPTAVKVELVDRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSRKNINCSIAESLDRFSPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAV-AERVPVEKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDKLIAAGAFIGDAIGRPTASKVARA 295          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: A0A6A5L0Y2_LUPAL (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=14 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L0Y2_LUPAL)

HSP 1 Score: 392 bits (1008), Expect = 1.080e-130
Identity = 196/293 (66.89%), Postives = 235/293 (80.20%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARA 1064
            P  V +VEVGPRDGLQNE +MVPT VKVEL++RLS AG  ++EAASFVSPKWVPQM D +E+LA I R  GV+YAALTPNL+GLE AL A  DEVAVF AASE+FS  NINCSI ESLDRF PVME+AKA  +PVRGYVSCVLGCPYEG +APRAV +VA+ L  MGCY +SLGDTIG GT      ++ ++ A  +P +K A+HFHDTYGQALANIL A++ GV V D+SV+GLGGCPYA GA GNVA+EDV+YML+G+G+ TG+DLD L+ A  +IS+ +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKTMVPTAVKVELVNRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAV-AERVPVDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: A0A1Y5SIC2_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SIC2_9PROT)

HSP 1 Score: 391 bits (1004), Expect = 4.970e-130
Identity = 194/300 (64.67%), Postives = 232/300 (77.33%), Query Frame = 3
Query:  177 IRWPTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAK 1076
            + WPT V + EVGPRDGLQNE   V   VK EL+DRL AAG G +EAASFVSPKWVPQMA  +E++AAI R  G +Y ALTPN+RG E A +AGVDEVAVFAAASE FS  NINCS+ ESL+ F+PV+E AKA  LPVRGYVSCVLGCP++G V P  V  VA +L  MGCY VSLGDTIG GT      ++E++ A  +P EK  +H+HDTYGQALANIL ++E G+   D+SV+GLGGCPYAPGA GNVATEDVVYMLDG+G+ TGIDL+ L+  + +IS++LGRPP SRVARAM A+
Sbjct:    1 MAWPTRVRMFEVGPRDGLQNEKQEVSPAVKAELVDRLVAAGIGTVEAASFVSPKWVPQMAGSAEVMAAIHRVPGARYTALTPNMRGFEAAREAGVDEVAVFAAASEGFSRKNINCSVAESLEMFRPVVEAAKAAGLPVRGYVSCVLGCPFDGDVPPGDVARVAAALYGMGCYEVSLGDTIGVGTPARARAMLEAV-AGDIPVEKIGVHYHDTYGQALANILASLEFGIATIDSSVAGLGGCPYAPGATGNVATEDVVYMLDGLGIETGIDLEALVRTAWWISDRLGRPPVSRVARAMKAR 299          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: D3NZD1_AZOS1 (Hydroxymethylglutaryl-CoA lyase n=5 Tax=Azospirillum TaxID=191 RepID=D3NZD1_AZOS1)

HSP 1 Score: 390 bits (1002), Expect = 8.660e-130
Identity = 196/293 (66.89%), Postives = 230/293 (78.50%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARA 1064
            P  V +VEVGPRDGLQNE SMVPT VKVEL+DRLS  G  +IEAASFVSPKWVP+M D +E+LA I R  GV+YAALTPNL+GLE A  A  DEVAVF AASE+FS  NINCSI ESLDRF PVME+AKA  +PVRGYVSCVLGCPYEG +AP+AV EVA+ L  MGCY +SLGDTIG GT      ++ ++ A  +P EK A+HFHDTYGQALANIL A+  GV V D+SV+GLGGCPYA GA GNVA+EDV+YMLDG+G+ TG+DLD L+ A  +IS+ + RP  S+V RA
Sbjct:    4 PKFVRMVEVGPRDGLQNETSMVPTAVKVELVDRLSDTGLSVIEAASFVSPKWVPRMGDSAEVLAGIARKPGVRYAALTPNLKGLEDAFAARADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERAKAAGVPVRGYVSCVLGCPYEGEIAPQAVAEVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAV-AERVPVEKVAVHFHDTYGQALANILAALHMGVAVIDSSVAGLGGCPYAKGASGNVASEDVLYMLDGLGIETGVDLDRLIAAGAFISDAIDRPTASKVGRA 295          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: A0A162KV33_9PROT (Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella TaxID=171436 RepID=A0A162KV33_9PROT)

HSP 1 Score: 389 bits (999), Expect = 2.830e-129
Identity = 190/297 (63.97%), Postives = 236/297 (79.46%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAK 1076
            P+ V +VEVG RDGLQNE  +VPT VK+ELI+RL+AAG   +EA +FVSPKWVPQMAD +E++  + R  G +Y  LTPNL+GLE AL+ G DEVAVF AASEAFS  NINC+I ESL+RF+PV+E+A+     VRGYVSCVLGCPYEG + P  V EV+++L +MGCY VSLGDTIG GTAG   TL++++ A  +P ++ A+HFHDTYGQALANIL A+EEG+ V D SV+GLGGCPYA GA GNVATEDV+YML+GMG+ TGID D +L+A  +IS+QLGRPP  RV+RA+ AK
Sbjct:    4 PSEVRIVEVGARDGLQNEKEVVPTAVKIELIERLAAAGLPAVEATAFVSPKWVPQMADHAEVMRGLTRRPGTRYPVLTPNLKGLESALEVGADEVAVFGAASEAFSKRNINCTIAESLERFRPVVERAREAGAQVRGYVSCVLGCPYEGEIDPAKVAEVSKALYEMGCYEVSLGDTIGTGTAGKVKTLIDTVSAV-VPRDRLAVHFHDTYGQALANILAALEEGIAVVDASVAGLGGCPYAKGATGNVATEDVLYMLNGMGIRTGIDFDAVLQAGWFISDQLGRPPAGRVSRALRAK 299          
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Match: UPI000E2EF336 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2EF336)

HSP 1 Score: 387 bits (993), Expect = 2.120e-128
Identity = 196/298 (65.77%), Postives = 234/298 (78.52%), Query Frame = 3
Query:  186 PTAVSLVEVGPRDGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEILAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINCSIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQSLIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGVNTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAKG 1079
            PT+V+LVEVGPRDGLQNE + +  + K++LI  L+AAG  +IEA SFV+PKWVPQMAD   + A + R  GV+Y ALTPNL+G ERAL AG DEVAVF AASE FS  NINCS+ ESL RF PVM+ A   ++PVRGYVSCVLGCPYEG +AP  V EV+ +L+DMGCY VSLGDTIG GTAGST TL+E L A  +P E+ A+HFHDTYGQALANILVA++ G+T  D SV+GLGGCPYA GA GNVATEDVVY+LDG+G+++GIDL  L+ A   IS+ LGR P SR ARA+ AKG
Sbjct:    4 PTSVTLVEVGPRDGLQNEATTIALQDKLQLIQDLAAAGHRVIEAGSFVNPKWVPQMADSEAVFAGLTRAPGVRYTALTPNLQGFERALAAGADEVAVFGAASERFSQKNINCSVAESLQRFAPVMQAAAQHNIPVRGYVSCVLGCPYEGDIAPEKVREVSAALLDMGCYQVSLGDTIGTGTAGSTATLLEHLLAT-LPAERLAVHFHDTYGQALANILVALQHGITTIDASVAGLGGCPYAKGASGNVATEDVVYLLDGLGIDSGIDLTALVAAGARISKVLGREPVSRSARALLAKG 300          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.115.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ51_ECTSI1.170e-17283.44Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus... [more]
A0A2U1VHB5_9PROT1.450e-13366.55Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
UPI0004212E153.330e-13267.23hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
UPI0016659C4E5.420e-13265.66hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella ... [more]
G7Z9X9_AZOL46.670e-13267.58Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospiril... [more]
A0A6A5L0Y2_LUPAL1.080e-13066.89Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A1Y5SIC2_9PROT4.970e-13064.67Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibact... [more]
D3NZD1_AZOS18.660e-13066.89Hydroxymethylglutaryl-CoA lyase n=5 Tax=Azospirill... [more]
A0A162KV33_9PROT2.830e-12963.97Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella ... [more]
UPI000E2EF3362.120e-12865.77hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:499509..505072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQ51
PFAMsHMGL-like
Model size1706
Max annot lvl2759|Eukaryota
KEGG rclassRC00502,RC00503,RC01118,RC01946
KEGG koko:K01640
KEGG ReactionR01360,R08090
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146
KEGG ModuleM00036,M00088
Hectar predicted targeting categorymitochondrion
Exons5
Evalue3.88e-177
EggNOG OGsCOG0119@1|root,KOG2368@2759|Eukaryota
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA lyase
Ec32 orthologEc-26_006120.1
EC4.1.3.4
Descriptionhydroxymethylglutaryl-CoA lyase activity
Cds size1014
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.115.2prot_P-littoralis_Contig64.115.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 500130..505001 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791335.4818459-UTR-P-littoralis_Contig64:499508..5001291680791335.4818459-UTR-P-littoralis_Contig64:499508..500129Pylaiella littoralis U1_48UTRP-littoralis_Contig64 499509..500129 -
1680791335.5721512-UTR-P-littoralis_Contig64:505001..5050721680791335.5721512-UTR-P-littoralis_Contig64:505001..505072Pylaiella littoralis U1_48UTRP-littoralis_Contig64 505002..505072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791335.4931831-CDS-P-littoralis_Contig64:500129..5003601680791335.4931831-CDS-P-littoralis_Contig64:500129..500360Pylaiella littoralis U1_48CDSP-littoralis_Contig64 500130..500360 -
1680791335.5093064-CDS-P-littoralis_Contig64:500878..5010731680791335.5093064-CDS-P-littoralis_Contig64:500878..501073Pylaiella littoralis U1_48CDSP-littoralis_Contig64 500879..501073 -
1680791335.5228634-CDS-P-littoralis_Contig64:501543..5017351680791335.5228634-CDS-P-littoralis_Contig64:501543..501735Pylaiella littoralis U1_48CDSP-littoralis_Contig64 501544..501735 -
1680791335.541277-CDS-P-littoralis_Contig64:504079..5042801680791335.541277-CDS-P-littoralis_Contig64:504079..504280Pylaiella littoralis U1_48CDSP-littoralis_Contig64 504080..504280 -
1680791335.5614047-CDS-P-littoralis_Contig64:504806..5050011680791335.5614047-CDS-P-littoralis_Contig64:504806..505001Pylaiella littoralis U1_48CDSP-littoralis_Contig64 504807..505001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.115.2

>prot_P-littoralis_Contig64.115.2 ID=prot_P-littoralis_Contig64.115.2|Name=mRNA_P-littoralis_Contig64.115.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MVRSCGSLVATSRRISCAKTPASAGARRGTRSSGGIRWPTAVSLVEVGPR
DGLQNEPSMVPTRVKVELIDRLSAAGCGIIEAASFVSPKWVPQMADGSEI
LAAIRRPSGVKYAALTPNLRGLERALDAGVDEVAVFAAASEAFSAANINC
SIQESLDRFKPVMEKAKAVSLPVRGYVSCVLGCPYEGRVAPRAVIEVAQS
LIDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGMPYEKTAMHFHDTYGQ
ALANILVAMEEGVTVFDTSVSGLGGCPYAPGAGGNVATEDVVYMLDGMGV
NTGIDLDLLLEASLYISEQLGRPPQSRVARAMSAKGG*
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mRNA from alignment at P-littoralis_Contig64:499509..505072-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.115.2 ID=mRNA_P-littoralis_Contig64.115.2|Name=mRNA_P-littoralis_Contig64.115.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5564bp|location=Sequence derived from alignment at P-littoralis_Contig64:499509..505072- (Pylaiella littoralis U1_48)
CTCAAACTCACGTCAAGGGGTGTCGGCAGCACGTGCAGTGTAGTGTGGTG TATCTCTGGTATCGCGGAAGGATGGTGCGATCATGTGGGTCCCTGGTAGC CACCTCACGTCGTATATCATGCGCCAAGACACCAGCATCAGCAGGAGCAC GTCGAGGCACAAGAAGCAGCGGCGGGATTAGATGGCCAACAGCCGTAAGC CTAGTTGAAGTTGGACCAAGGGATGGACTCCAGAACGAACCTTCCATGGT GCCAACAAGGGTGAAGGTGAGGCAGTAGTGTCAGCAAATGGCACACGAGT CTCCTAGCGATTGAATTTTCTCTGTTTCTGCAATTACCGCACTAAGCTCG CTGCTGATCCCACCATACAGACGCACAATGCTTGACCTCCATGACGAGGA ACACAGCAGCAGCAGTCTCGCCGCAGTCAGTCAGTCAGGGATAGGTATCA TTCCACCTGGGAACCAGTTTTCAACGATCGATTACTCCATAGATATGTAG CACGGGAGAAAGGGCGTCGGGGCTCATCTGGGCGGCGCTGGAACCGTCTC ATGGAGATCTTTCCGATCAGATAGACAGGCATCGTTTGATGATGTTGGTA GCCTCGTCGCTGTGAATGTGTTCGAGCTTCGCGAGTCGGGCCGTGCGATG CCGTTGTGTCCTACTGCTATATGCGGCCTACTTCTCTACGGCGGTGGCAG TACATGCGGACCTTGCTCGAGTTTCTTTGAGCATCTTCAACAAACTCACA TCCATATGGATTATTGTTCACGCTCTGCTGTGCATACACCAGGTGGAATT GATCGACCGGTTGTCTGCCGCAGGTTGCGGAATCATCGAAGCTGCGTCGT TCGTCAGCCCCAAGTGGGTCCCCCAGATGGCCGACGGGAGTGAAATTTTG GCCGCGATCCGACGACCATCGGGCGTGAAGTACGCGGCCTTGACGCCCAA TCTCCGAGGGCTGGAAAGGGCGCTCGATGCTGGCGTTGACGAGGTGCATT TTATGGAAGCCTACTGCTGTACATTGGGCTCTTTCTGTATCTCTCTTGTG CCTTTCCACTTCGAAGTGTATAATATACCGAATATATTGAGAGTTGTATT GCCGTTTCGTCTATGGTCACACATACGTACAAAGCTCATTGCGGTGTTCT TTTGCAGGGCTCCGCGCGGTACCTGCGGTACCGCGCGGAGCGGTACGGTA ACGTTTTGCCCGCCGCAGGCGGAAAAAATGTTGGGCGTTCCCGAACACGG TACGGGAAAATGTTCCCGTTCGCGTACCGCGGGATGGGAACGGGATGGGA ACGCGGGAAGCCAGTAGGCTGGCGGGATGGGATGGGAATTCGAAATTTCT CTGTGGGATGGGAACGGTTGGGAAACAAGTCGGAAAGTCGGGAAATTAAC TGCAATTAAATAAGCCGGGAACTGAGTCGGGAAATGGTCGGAAAAGAAGT CGGGAAAGAAGTCGGGAAACATGTCGGTAACATACATGTCGGGGGGCACA GAGAACTCGATTCTTCGTGTCTTTCATCGCTTCCACTGTTTTTCAGCGGT GCTTGTGTGTGATGTACATGTTTTGACTCAGAAAAAAAAAACCAGGATTA CACCAACAATAATGAGAGCAGATCGCGTCCTACATCCAGTTCGACCAAAC TACTAACTTGAGTAGCTATGAGTATGGCATTTATTTGCAGATGATGTGCG ATGTATTCTTGTGTCTTTTTCCCTGATTTTTGTTTATTCGTTTTCCCGTA CTATGATTTATTCTTAAAACTAGCTCACTCAAATTTTGAATACGAATAAA TCTGGCCCCTCTTAAAATGAAATGAACAATCAACCGGTCCCCCCAGGAGA CATTTTTTCAATGTTTCCTTTCGTATTTATTAGCTACGAAGTGTATTCAT GAATTATACTTTTCGAAGCACATGAAGTAAAATACAAACGATTTTCCAAC CACCCCCCCACAACAGCAGGCGAAACGAACCAACCCAGTAATAAGTGTAG TTCACCTATAATCGCCGACTCAATCTGCCACCCGCTTCGCCCCTTCCCCA CGCGAACGTCCGAACAAACACAATAAAATAATGATAAAAGACAACCTGAA ACAACAATGGCAACAAGACCTCGAGCGAAGTGTTTGTTTGTTCCACCTAC AACACGTTTCCGGCTACAGCTCTCTACTCCAGCAGCAGCAGTCTTTGAAT TTGAGGCAAATTATGCCTCAGCAGCTGCATCGCGCTCTTGTTTGAGTTCT TCCAACTCTTCGACAACTTTACCCAACCCACAGGAATTAGGTGCCTGTTG AGCCTGTAGCACAGCAGTAGTATCAGCTAATACATATAACAGGTCGTACC AGATGCAGAAAATACGAAAATACAGAGTAGGTATGATTTGTGTAATATAA CGAAGTACTTCGTATATCATACATACAACACAGAGCTGGTACTTTGTACT GCTGTATTGGTGATGGGAGAAACTGATGATGAGAGAAACTGGAGATGAAT CATGCCGCAGTCGAATGTGGGATGGGAAAACAGATTATACAACCGGGAAT GGGATGGTAAGGGGGAGGAAAGCCAGTGGGATGCTGGACGGGAGAGAGAG TGCCAAAGTCGGGAATGGGATGGGAAGAGAGTGGGCAGATGGTGGCGCGG GAAGAGAGTAGGACGGGAGCACTCTGTGTTGCGGTGGGACGGGAAATGTG GGAACAGCACCTAGCAACGGGAGAGGTCGGGAACGCTCGGGCTGGAATGA AATATCGCTGGTGACGGTACGGTATTACCGTTCCCGTTCCCGTTCCCGTA CTATTTCCCATCCGGACCTTTACCGCGCGGAGCCCTGTTCTTTTGTCGCA CACGTGGGCATGAGGAGAAAAGGAAGCACATGGTAGGTGGGCGCGGGTGC TGTCATTTGTAGATTTACTGCGATATGCGCGGCGCGATATCTTAATTTTA ATTGTGTCTACGTGAGGTACATTCCAGGGTCTAGTAGAATGTCAAGGACC GAGGGCCAGAGGGGGGGAGCATCGACGACGCCAATGGTGTCAAAGGATGG TACGACAATGGAGCGAGATGGGTAAGATTCTGCTCAAGCACGGCCGTAAC GATTGTAGCCATGGTATCTTTGGCAAAGCCACGCACACACAAATTCACCC AGAATCCCCAACAGATCCCGTGGTCACGCTGTTTCAAACAACATGCCAAG ATTAATGACACGCAATCCAGGCTTGATGGGCAACGCGAGGCAGGCGCACA CTCTCACTTCTACCAAAGCTCGGTTGACATTTTTGTCATCTCTACCCGCC ATGGTCTGTTTCTGATTTTGTTCCTGCCATGGAGCAGGTGGCGGTGTTCG CCGCGGCGTCGGAGGCGTTCAGTGCTGCCAATATTAACTGCTCCATCCAG GAGAGCTTGGATCGCTTTAAGCCAGTCATGGAGAAGGCAAAGGCAGTAAG CTTGCCGGTACGCGGCTACGTCTCCTGCGTGCTCGGGTGCCCCTACGAGG GGCGAGTTGCTCCAAGGGCCGTCATCGAGGTCAGTGGGAAGGCCGTCGTC GTTGTTGATGTTGTTGTCATGATAAAGTTGTTGTTGAAGTCTGTGTAGTA CCTCCATATCCTGATCCAGCTGGTGACAAAAGGCTGCCGTGTTCTTACGT ACTTTGGATGTACTTCGAAGTAGTATGTATGGAAGTCACAAAATTGCAGC AGCATCACACGTGACGAAAACTCACGGTGCGGCTTGTAGAGCTATGCCAG TATTTTTGGCACCGCAAACGTGTTGGTGTGATATCCACTACGGCGTCCGC TGAGTGAACCAATTATGTTTCCGTTGCGCTCTAATTTTTTTTTATTTGTT TGAGGATCGTGGCACAGTCTCTGATGGACATGGGGTGCATCTGAGTGTCT GTCGGAGAAAACGTGGTGGTGTGATACCCGCTATGCGTCCGCTGAATGAA TCAATCATATTTCCCTTGCGCCCTATTATTATTATTTTGTTTGAGGAAGG TGGCGCAGTCCCTGATCGACATGGGGTGCTACTCAGTGTCTCTAGGAGAT ACGATTGGCGCAGGGACAGCTGGCAGCACCCTTACTCTTATGGAAAGTTT GAAAGCAGCAGGAATGCCTTACGAAAAAACGGCGATGCACTTCCACGATA CCTACGGACAAGCCTTGGCGAATATCCTCGTAGCGATGGAAGAGGTGTGT GTCGTCTGACAACTACACTGCTGCTATTTGCAGCATACACCCCCCAAAAC TCTTGAGTACCGTTCATTTGCACGTGTAGCGGCTGCTGACCAGGTTATGG CCCAAACTTACAAACCGCCAAATCTGTCCGAAAGTCATTCATCCTCGTGC TTGGTGCTAAATGATGTCTACACGATGGCGATATTGAAACGGCGCAAAGC TCCCTCCGCCTGTATATCACAACAGCAGTAGTACTCACCTCCAGAATGGA AGCAATGGAGCGTACTGCAATCCGAGTGCTTTCCCAATGAAGTCTTGAGA TGCGTTTGAAAGCATTCGAGTTCATTTACGCATTATCTGCCACCCGCTTC CCCAAAGCCCCCCTTTTTTTTGCTACGGCTGTGTCTGTTTTCCGCCAGTC CCCCACGCTGCACTCCACTACTGATTCACCAGATCCTCCTCCCTCCTTGT CCCTCTGCCAACACTCGTCGATTACAACGCTGGGGTCACGGCTTTCCTGC GTATTTCTTCAGGGAGTCACGGTGTTCGACACGTCCGTTTCTGGCCTAGG GGGTTGTCCTTACGCTCCAGGGGCAGGCGGCAACGTGGCGACAGAAGACG TTGTGTACATGCTTGACGGGATGGGGGTAAATACGGGCATTGACCTAGAC TTGTTGCTGGAGGCGTCTTTGTATATTTCAGAACAGCTGGGCAGGCCACC ACAGTCCAGGGTAGCAAGAGCGATGTCGGCGAAGGGGGGTTAACTTTATT GTGGCAAGAGGACGAAGACGCTTGAGATGGTTTTCCTGTGTCTTGCTTGC ACGTGCTATCGCGACGTATCTCTTTGCCCTCTCGCATTTACATATGTGTA GTTGAACGACTGCTGCACTTTGTTTCCACAGGGATGTAGTTTCGAAATGT TCATAGTAAAACGTTCCGGTGTTTTTCGTTGTTTTTGTGTTTTGCGGCTC CAATGCGGTTTTCATGCCGGTTTTATACACAAAACTATCATATCTAGCGT GAAGTGTGGAGGAGTATGGAGCTTACAACAACAGTGCCATCTGCACACGC CTGCATCACCTGCCTTGGCTAGGATGTGTTTGGAAGGTGCACTTCGAAGT TTTTCTTTTTTTGTTTTCTGCCCTTCTGCCCTTCTGCCTTTTTGCCCCTT CACGTCTGCTTGCTTGCGCTGCCTGAAAATGTTGCTGGGCCGGTGAAGAG AGTAGCACGCCCGATGTCCATATTTATCGACACCCTGGCAACTGAATTCG GTCTCTTTCGTCTTTTTTTGTCACCCCTCTGTGACTTTTTATTTCATTTT GTGACTTGGCTCTGGACCAGGCTCCATTTTGTTCTATTTTTGTACAGCGT TGTGTGATTTATCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:499509..505072-

>mRNA_P-littoralis_Contig64.115.2 ID=mRNA_P-littoralis_Contig64.115.2|Name=mRNA_P-littoralis_Contig64.115.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig64:499509..505072- (Pylaiella littoralis U1_48)
ATGGTGCGATCATGTGGGTCCCTGGTAGCCACCTCACGTCGTATATCATG
CGCCAAGACACCAGCATCAGCAGGAGCACGTCGAGGCACAAGAAGCAGCG
GCGGGATTAGATGGCCAACAGCCGTAAGCCTAGTTGAAGTTGGACCAAGG
GATGGACTCCAGAACGAACCTTCCATGGTGCCAACAAGGGTGAAGGTGGA
ATTGATCGACCGGTTGTCTGCCGCAGGTTGCGGAATCATCGAAGCTGCGT
CGTTCGTCAGCCCCAAGTGGGTCCCCCAGATGGCCGACGGGAGTGAAATT
TTGGCCGCGATCCGACGACCATCGGGCGTGAAGTACGCGGCCTTGACGCC
CAATCTCCGAGGGCTGGAAAGGGCGCTCGATGCTGGCGTTGACGAGGTGG
CGGTGTTCGCCGCGGCGTCGGAGGCGTTCAGTGCTGCCAATATTAACTGC
TCCATCCAGGAGAGCTTGGATCGCTTTAAGCCAGTCATGGAGAAGGCAAA
GGCAGTAAGCTTGCCGGTACGCGGCTACGTCTCCTGCGTGCTCGGGTGCC
CCTACGAGGGGCGAGTTGCTCCAAGGGCCGTCATCGAGGTGGCGCAGTCC
CTGATCGACATGGGGTGCTACTCAGTGTCTCTAGGAGATACGATTGGCGC
AGGGACAGCTGGCAGCACCCTTACTCTTATGGAAAGTTTGAAAGCAGCAG
GAATGCCTTACGAAAAAACGGCGATGCACTTCCACGATACCTACGGACAA
GCCTTGGCGAATATCCTCGTAGCGATGGAAGAGGGAGTCACGGTGTTCGA
CACGTCCGTTTCTGGCCTAGGGGGTTGTCCTTACGCTCCAGGGGCAGGCG
GCAACGTGGCGACAGAAGACGTTGTGTACATGCTTGACGGGATGGGGGTA
AATACGGGCATTGACCTAGACTTGTTGCTGGAGGCGTCTTTGTATATTTC
AGAACAGCTGGGCAGGCCACCACAGTCCAGGGTAGCAAGAGCGATGTCGG
CGAAGGGGGGTTAA
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