prot_P-littoralis_Contig64.67.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.67.1
Unique Nameprot_P-littoralis_Contig64.67.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length349
Homology
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 3.340e-125
Identity = 192/286 (67.13%), Postives = 217/286 (75.87%), Query Frame = 0
Query:   62 ASGTTITLFREPSASFVRRYLERQDAEEGSANHPFAGFSDPSSSNGWDCAAPSQPPPGFQQRTVRVHLGGGKGTYERGREVLLQWRMHEGSSWARIVLGQAPTAIAVQRNMATVAKSLAGLAWCINPCQIMYERRDAALRFLAPPGTDPNQPRDFVEAPENNAETPKRLVEGKERKPGRLWAGKAPTSAPKWATFMPGSQHKGKQSAVAYATKAGHLIQGEERMRVLHFCGRGGDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETM-RVITSSLSTP 346
            +SGTT T FREPSAS VRRYLERQD E+   NH FAGFSD +++             GFQ+RTVR HLG GK TY RGRE LL+W+MHEGSSWARI LGQ P   A+QRN+ T+AK+ AGL WCINPCQ++YER D ALRF+APPG D N+  D  EA     E  KR++ G     G LWAGK PTSAP WA+F+PG +HKG+QSAVAYATK GHLIQGEERMRVLHFCG GGDDSVWFEVYSVSRGAG VG +VFPFVQSMQRRFFR+QAETM RV+ SS   P
Sbjct:   19 SSGTTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQ-GFQERTVRAHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEA--RPVENTKRVMGGGG---GALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSSSGLP 298          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: W7TBY2_9STRA (DUF1990 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBY2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.060e-16
Identity = 73/234 (31.20%), Postives = 100/234 (42.74%), Query Frame = 0
Query:  124 TVRVHLGGGKGTYERGREVLLQWRMHEGSSWARIVLGQAPTAIAVQR----NMATVAKSLAGLAWCINPCQIMYERRDAALRFLAPPGTDPNQPRDFVEAPENNAETPKRLVEGKERKPG--RLWAGKAPTSAPKWATFMPGSQHKGKQSAVAYATKAGHLIQGEERMRVLHFC-GRG--------GDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMRVITSS 342
            ++ V LG G+ TY + RE L  W+MH  S    IV G+              + T+A+   G AW +NPC + YE  D   R                       E  +          G  R+W                        SAVAY T   HLI GEERMRV+ +  GR         G+D VWFE+ SV+RG G+VG ++FP  Q MQR FF++Q   M+ + ++
Sbjct:  143 SMEVCLGRGQKTYAKAREALRGWKMHARSPTTGIVRGREGXXXXXXXXXXVGVVTLARVYGGGAWVMNPCCVAYESFDKQDR-------------------NGEGEGGRXXXXXXXXXXGGPRVW------------------------SAVAYTTVGRHLIAGEERMRVIWYPRGRXXXXXXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQFMVNT 333          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: A0A4D9CTF5_9STRA (DUF1990 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.050e-14
Identity = 62/181 (34.25%), Postives = 83/181 (45.86%), Query Frame = 0
Query:  171 NMATVAKSLAGLAWCINPCQIMYERRDAALRFLAPPGTDPNQPRDFVEAPENNAETPKRLVEGKERKPGRLWAGKAPTSAPKWATFMPGSQHKGKQSAVAYATKAGHLIQGEERMRVLHFC-GRG--------GDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMRVITSS 342
             + T+A+   G AW +NPC + YE  D              Q RD                EG+E + G          A  W             SAVAY T   HLI GEERMRV+ +  GRG        G+D VWFE+ SV+RG G+VG ++FP  Q MQR FF++Q   M+ + ++
Sbjct:  268 GVVTLARVYGGGAWVMNPCCVAYESFD-------------RQDRDG---------------EGEEGRKGXXXXXXXXXRARVW-------------SAVAYTTVGRHLIAGEERMRVIWYPRGRGXXXXXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQYMVNA 407          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 4.690e-10
Identity = 61/218 (27.98%), Postives = 87/218 (39.91%), Query Frame = 0
Query:  126 RVHLGGGKGTYERGREVLLQWRMHEGSSWARIVLGQAPTAIAVQRNMATVAKSLAGLAWCINPCQIMYERRDAALRFLAPPGTDPNQPRDFVEAPENNAETPKRLVEGKERKPGRLWAGKAPTSAPKWATFMPGSQH------KGKQSAVAYATKAGHLIQGEERMRVLHFCGRGGDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMR 337
            RV LG G+  Y + + +L +W  H    WA +   +      V       AK+L   AW  NP +I Y           PP   P  PR           T      G  R+       +      +WA     S        +G++ A A+ T AGH IQGEER  V        DDSVW+E+Y++SR   ++ T   P ++  Q +F  D    M+
Sbjct:   60 RVKLGQGRAAYRKAQRLLQRWH-HFDLGWASVNKAEMREGAPV----VVTAKTL--FAWSCNPLRISYVEERGLRGGQRPPWAPPPPPR-------AKGSTQLHTSCGGARESPSQGLARGGGGRAEWAAAQERSSGAAAHLPRGRRYAFAHTTLAGHQIQGEERFAVAW---NHEDDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQ 260          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 6.380e-10
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   62 ASGTTITLFREPSASFVRRYLERQDAEEGSANHPFAGFSD 101
            +SGTT T FREPSASFVRRYLERQD  +   NH FAGFSD
Sbjct:   19 SSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSD 58          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA)

HSP 1 Score: 66.6 bits (161), Expect = 7.920e-9
Identity = 64/220 (29.09%), Postives = 93/220 (42.27%), Query Frame = 0
Query:  126 RVHLGGGKGTYERGREVLLQWRMHEGSSWARIVLGQAPTAIAVQRNMATVAKSLAGLAWCINPCQIMYERRDAALRFLAPPGTDPNQPRDFVEAPENNAE----TPKRLVEGKERKPGRLWAGKAPTSAPKWATFMPGSQH----KGKQSAVAYATKAGHLIQGEERMRVLHFCGRGGDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMR 337
            RV +G G+  Y R R +L QWR H    WA +    AP    V+     V  + +   W  NP +I +   +  LR  A       Q   +V AP   AE      +RL  G     G L  G                      +G++ A A+ T  GH I+GEER  V        DDSVW+E+Y++SR   ++     P +++ QR+F  D  + M+
Sbjct:   71 RVQVGRGQAAYRRARSLLEQWR-HFDLGWASV---NAPP---VKPGSPVVVTAFSLCCWSCNPLRISFVE-EGGLRRNA------QQLPPWVGAPPTAAEGASLRQQRLHGGGSGVLGLLGTGXXXXXXXXXXXXXXXXXXXLPPRGRRFAFAHTTLQGHQIRGEERFCVAW---NAQDDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQ 273          
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Match: A0A2P6TVM3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVM3_CHLSO)

HSP 1 Score: 56.2 bits (134), Expect = 2.670e-5
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  263 KGKQSAVAYATKAGHLIQGEERMRVLHFCGRGGDDSVWFEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMR 337
            +G++ A A+ T AGH I GEER  V        DDSVW+E+Y++SR   ++     P +++ QR+F  D    M+
Sbjct:  219 RGRRYAFAHTTLAGHQISGEERFAVAW---NHEDDSVWYEIYTLSRPGSWITAATHPLLRAFQRKFAADSMAAMQ 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.67.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LQ57_ECTSI3.340e-12567.13DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
W7TBY2_9STRA1.060e-1631.20DUF1990 domain-containing protein (Fragment) n=1 T... [more]
A0A4D9CTF5_9STRA9.050e-1434.25DUF1990 domain-containing protein n=1 Tax=Nannochl... [more]
A0A2P6VI37_9CHLO4.690e-1027.98DUF1990 domain-containing protein n=1 Tax=Micracti... [more]
A0A6H5L025_9PHAE6.380e-1075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
E1Z534_CHLVA7.920e-929.09DUF1990 domain-containing protein n=1 Tax=Chlorell... [more]
A0A2P6TVM3_CHLSO2.670e-537.33Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 116..333
e-value: 4.5E-20
score: 72.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..226
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 266..337
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 71..195
NoneNo IPR availablePANTHERPTHR34202UPF0548 PROTEINcoord: 71..195
NoneNo IPR availablePANTHERPTHR34202UPF0548 PROTEINcoord: 266..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:316244..321738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.67.1mRNA_P-littoralis_Contig64.67.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 316225..322512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.67.1 ID=prot_P-littoralis_Contig64.67.1|Name=mRNA_P-littoralis_Contig64.67.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp
MRSLSVHKMPLCIKQGTLPPSPCMPVANAFTHSPRKSCAMRVVAGIALLP
ALLVVMILRATASGTTITLFREPSASFVRRYLERQDAEEGSANHPFAGFS
DPSSSNGWDCAAPSQPPPGFQQRTVRVHLGGGKGTYERGREVLLQWRMHE
GSSWARIVLGQAPTAIAVQRNMATVAKSLAGLAWCINPCQIMYERRDAAL
RFLAPPGTDPNQPRDFVEAPENNAETPKRLVEGKERKPGRLWAGKAPTSA
PKWATFMPGSQHKGKQSAVAYATKAGHLIQGEERMRVLHFCGRGGDDSVW
FEVYSVSRGAGFVGTVVFPFVQSMQRRFFRDQAETMRVITSSLSTPSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018960DUF1990