prot_P-littoralis_Contig64.55.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.55.1
Unique Nameprot_P-littoralis_Contig64.55.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length334
Homology
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 7.880e-101
Identity = 161/225 (71.56%), Postives = 183/225 (81.33%), Query Frame = 0
Query:    3 IPVATVFAQTRLSSSRKRPRCRGVQHVCKGAVLL-SLLQFTSTLTXXXXXXXXXXXXXXPPGPPQGHDPQDSSFDGGDWGDWKNQPPPGLNPYGMPFSPTIHQRYERPEPMDDLRSFAMSLEEKDRADLGGYIAVVLQKLANMNELFLGERGRKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTARAAVRVQ 226
            +P A++ A+ R  SSRKRPR R VQHV K AVLL SLLQ T+                 P   PQG+D QDSSFDGGDWGDW+NQP PG  P+GMPFSP IH+R+E+PEPMD+LRS A+SLEE+DRADLGGYIAVVLQKLANMNELFLGERGRKK+VFHSA+MP+VAVAEFVERV+NNI CPN+CLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTA   + ++
Sbjct:    1 MPTASMLAEFRPPSSRKRPRSRTVQHVSKSAVLLLSLLQLTTA------RRPGGGGYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIK 219          
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 5.000e-71
Identity = 111/131 (84.73%), Postives = 124/131 (94.66%), Query Frame = 0
Query:   96 MPFSPTIHQRYERPEPMDDLRSFAMSLEEKDRADLGGYIAVVLQKLANMNELFLGERGRKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTARAAVRVQ 226
            MPFSP IH+R+E+PEPMD+LRS A+SLEE+DRADLGGYIAVVLQKLANMNELFLGERGRKK+VFHSA+MP+VAVAEFVERV+NNI CPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTA   + ++
Sbjct:    1 MPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIK 131          
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF)

HSP 1 Score: 58.9 bits (141), Expect = 1.500e-6
Identity = 25/74 (33.78%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  123 EEKDRADLGGYIAVVLQKLANMNELFLGERGRKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDR 196
            EE   A L G+++++LQ++A  N+L  G R +K +VFH  + PT+++  +++R+     C   C ++  VY+DR
Sbjct:    6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQKMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLDR 79          
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Match: A0A7S2PVE5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVE5_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 3.480e-6
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0
Query:   99 SPTIHQRYERPEPMDDLRSFAMSLEEKDRADLGGYIAVVLQKLANMNELFLGERGRKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRL 216
            SP +  R E  E  D   S A  LEE  +  L   +A VL  LA+     LG R  + ++FH+A  P +++ +++ R++    C + CL+L LVY+DRL     +    V+PL  HRL
Sbjct:   93 SPPVLPRSEG-EFHDPGASIAAMLEEAGQEGLVSALANVLSHLAS-----LGCRAHRASIFHAAQTPQISITDYLTRIARYYHCSDSCLVLGLVYIDRLVKLQPDF--VVSPLNVHRL 202          
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Match: A0A7S1SBT1_ALECA (Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBT1_ALECA)

HSP 1 Score: 53.1 bits (126), Expect = 6.600e-5
Identity = 31/92 (33.70%), Postives = 52/92 (56.52%), Query Frame = 0
Query:  128 ADLGGYIAVVLQKLANMNELFLGERG---RKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRL 216
            AD G  ++ +   L+       G RG     +T+FH+A  P V V++++ER+   + C   CL++ LVY+DR+A   +E+   ++ LT HRL
Sbjct:    5 ADAGQLVSALAVVLSVHCSRAAGGRGCDSMGRTLFHAAREPAVGVSDYLERIRRRLRCSKECLVMALVYLDRIAEADAEVA--ISNLTVHRL 94          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KZ67_9PHAE7.880e-10171.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ63_ECTSI5.000e-7184.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5A7QWF6_STRAF1.500e-633.78Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0... [more]
A0A7S2PVE5_9DINO3.480e-634.75Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S1SBT1_ALECA6.600e-533.70Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 154..225
e-value: 6.1E-7
score: 29.9
NoneNo IPR availableGENE3D1.10.472.10coord: 117..224
e-value: 4.2E-13
score: 51.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:262968..268538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.55.1mRNA_P-littoralis_Contig64.55.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 262869..269301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.55.1 ID=prot_P-littoralis_Contig64.55.1|Name=mRNA_P-littoralis_Contig64.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=334bp
MEIPVATVFAQTRLSSSRKRPRCRGVQHVCKGAVLLSLLQFTSTLTTTTA
SRPGGGGHYHPPGPPQGHDPQDSSFDGGDWGDWKNQPPPGLNPYGMPFSP
TIHQRYERPEPMDDLRSFAMSLEEKDRADLGGYIAVVLQKLANMNELFLG
ERGRKKTVFHSASMPTVAVAEFVERVSNNIACPNLCLMLTLVYMDRLALP
SSELHLYVTPLTAHRLFTARAAVRVQRQFLRQDELRDRLSGCGAQALGAP
YVAGPCQGRVRVSGRAEPIHGQLRAQPQRDGAVRRQALLGTTSVPLPVEV
DLYHRKTVAHTLSLLICLLCKPASRRFSAMAKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like