mRNA_P-littoralis_Contig64.50.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.50.1
Unique NamemRNA_P-littoralis_Contig64.50.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 2.660e-28
Identity = 168/636 (26.42%), Postives = 243/636 (38.21%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGIGAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFP-------GR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAFVMRTTRSVVSS*SSSWRGAT------------------------SYRPC----PVWSSRKYGSSPWRA*GLVGTPILLAGD-----VVLNRGHRRVFQAC--GDHVLFQELCCLP*QRENRGHHTRRRQRRCTERGRRHPLCYP*ARWPEGYSPLSGFRVIVLAER--VGRIPSRGAGRMA*KR-----RYKKKLLRKR------------VGCRPEGYEAEEFSGRNCVQWLSEHSFIGTDRATQTLTCGHNPDLAVVRQYQSCGCERRKFSLSCGCRGRCNARSSPLCPRHRPIRLFHQSSRMPSRSSP 1791
            W+  +   GF  D FY  DAHGV+L VSIHQGV P  LEKG+AG++D F R   SKWL   ELL++ +DR  LV VIK  +Q  R E +GEC+R         +   Q    LR +     D    +L M +             G  K + I A++    +  L    D   G+ A  + L +     GV A     G++           +      +G +R+                  RG ++GEAELS++HF        G+   + +  SV     + +  A    G     G   V+V VQ+VVG    FLW+NR F   +   +     S+W   T                         Y P     P            R  GL   P+    +     V +N   + +       D   F      P Q                       L        EGY  +  + ++ L ++      PS  + R   +R     RY +  LR              V  R +G + +E +  NCV  LSE+++I  DR T TL CG NPD A+  +   C C+ +K SL+CGCR RC  R     P    +R   +S+  P+  +P
Sbjct:  346 WVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWT------GDTKPNGIVAFYGVGGEPGL--RADHPAGVDAEGVGLEM----GGVGATEALSGTEPLLHFRNGNDPI------LGVERQ------------------RGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTT-GWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFA--SICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQ-----------------------LVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPDTALCNR---CRCKNKKCSLACGCRNRCTLRRVAPAP----VRAAGRSASRPTVGAP 912          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.040e-28
Identity = 168/636 (26.42%), Postives = 243/636 (38.21%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGIGAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFP-------GR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAFVMRTTRSVVSS*SSSWRGAT------------------------SYRPC----PVWSSRKYGSSPWRA*GLVGTPILLAGD-----VVLNRGHRRVFQAC--GDHVLFQELCCLP*QRENRGHHTRRRQRRCTERGRRHPLCYP*ARWPEGYSPLSGFRVIVLAER--VGRIPSRGAGRMA*KR-----RYKKKLLRKR------------VGCRPEGYEAEEFSGRNCVQWLSEHSFIGTDRATQTLTCGHNPDLAVVRQYQSCGCERRKFSLSCGCRGRCNARSSPLCPRHRPIRLFHQSSRMPSRSSP 1791
            W+  +   GF  D FY  DAHGV+L VSIHQGV P  LEKG+AG++D F R   SKWL   ELL++ +DR  LV VIK  +Q  R E +GEC+R         +   Q    LR +     D    +L M +             G  K + I A++    +  L    D   G+ A  + L +     GV A     G++           +      +G +R+                  RG ++GEAELS++HF        G+   + +  SV     + +  A    G     G   V+V VQ+VVG    FLW+NR F   +   +     S+W   T                         Y P     P            R  GL   P+    +     V +N   + +       D   F      P Q                       L        EGY  +  + ++ L ++      PS  + R   +R     RY +  LR              V  R +G + +E +  NCV  LSE+++I  DR T TL CG NPD A+  +   C C+ +K SL+CGCR RC  R     P    +R   +S+  P+  +P
Sbjct: 1365 WVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWT------GDTKPNGIVAFYGVGGEPGL--RADHPAGVDAEGVGLEM----GGVGATEALSGTEPLLHFRNGNDPI------LGVERQ------------------RGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTT-GWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFA--SICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQ-----------------------LVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPDTALCNR---CRCKNKKCSLACGCRNRCTLRRVAPAP----VRAAGRSASRPTVGAP 1931          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.980e-20
Identity = 100/325 (30.77%), Postives = 140/325 (43.08%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGIGAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFP-------GR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAF 1020
            W+  +   GF  D FY  DAHGV+L VSIHQGV P  LEKG+AG++D F R   S WL   ELLL+ +DR  LV VIK  +Q  R E +GEC+R         +   Q    LR +     D    +L M +             G  K + I A++    +  L    D   G+ A  + L +     GV A     G++           +      +G +R+                  RG ++GEAELS++HF        G+   + +  SV     + +  A    G     G   V+V VQ+VVG    FLW+NR F
Sbjct:  257 WVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSTWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWT------GDTKPNGIVAFYGVGGEPGL--RADHPAGVDAEGVGLEM----GGVGATEALSGTEPLLHFRNGNDPI------LGVERQ------------------RGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTT-GWLRPRGEGAVDVTVQKVVGGETKFLWMNRVF 544          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5JHH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.790e-19
Identity = 99/323 (30.65%), Postives = 132/323 (40.87%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGIGAGALVLFLRKSTSGVQAWALCRGSQ-----RRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFPGR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAF 1020
            W+  +   GF  D F+  DAHGV+L VSIHQGV P  LEKG+AG++D F R   SKWL   EL L+ +DR  LV VIK  +Q  R E +GEC+R         +   Q    LR +     D    +L M +             G    + I A++   S+  L+ +  T    G G           GV A     G++     R+   H P           G KR+                  RG ++GEAELS               SV     + +  A    G     G   V+V VQ+VVG    FLW+NR F
Sbjct:   20 WVREHCADGFADDPFFDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELFLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTGPVPSLQYGPWLRADGKAARDGIAAYLAMRVLADEVWT------GDTNPNGIVAFYCVGSEPGLSADHPTVDAEGVGL-------EMGGVGATEALSGTEPLLHFRKGNDHTP-----------GVKRQ------------------RGPDIGEAELSWT-----------VSSVDTDLWMTILLAMAT-GWLRPRGEGAVDVTVQKVVGGETKFLWMNRVF 288          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5K5E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E1_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.210e-19
Identity = 105/332 (31.63%), Postives = 145/332 (43.67%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARVLTRC--------QKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGI-------GAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHF---PGR*GGRQVAH----SVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAF 1020
            WL+ +       + FY   A+GV+L VSIHQGVR  DLE G+ GV++ FV    S+W M  +LLL+ +DRA+LV  IK  +Q  R + IG CA  L           Q    LR N          HL M +         +R  G    + I A++    + SL  +   +  +       G  A    +      V+   +  G     +   P   ++ E   +  +R  GR   VQ E        RG N+GEAELSLVHF     +  GR + +    SV    R+ +  A    G     G   VEV VQ+VVG  P +LWVNR F
Sbjct:  600 WLQDHSSDAVADEPFYTVHAYGVDLPVSIHQGVRQRDLEGGAQGVINYFVSELDSRWRMGADLLLVCNDRASLVPAIKGREQLGRADKIGGCALSLDPTSTDAIPPSQYQSWLRDNQKAARGGIAAHLAMGILDD------KRWTGGCTLNGIVAFYGVGGEASLRTSDAADPAVRDGGGLPGGPATSPEIPAPVGSVENSTVRSGGGGTEEGGVP--TLAEEYPLLHYRRGAGR--SVQRE--------RGPNIGEAELSLVHFIVWAKKYWGRNIENWLVTSVDTDQRMIILLAMST-GFLKASGEGAVEVTVQKVVGGAPKYLWVNRVF 912          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5JJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 6.710e-19
Identity = 143/574 (24.91%), Postives = 211/574 (36.76%), Query Frame = 1
Query:  127 DRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NK----DTETGIGAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFPGR*GGRQVAHSVS--RHGRVDVHPAGDEHGESTTHGPRL---VEVAVQRVVGEVPHF-------LWVNRAFVMRTTRSVVSS*SSSWRGATSYRPCPVWSSRKYGSSPW-----RA*GLVGTPILLAGDVVLNRGHRRVFQAC----GDHVLFQELCCLP*QRENRGHHTRRRQRRCTERGRRHPLCYP*ARWPEGYSPLSGFRVIVLAERVGRIPSRGAGRMA*KRRYKKKLLRKR------------VGCRPEGYEAEEFSGRNCVQWLSEHSFIGTDRATQTLTCGHNPDLAVVRQYQSCGCERRKFSLSCGCRGRCNAR 1713
            D FY  DAHGV+L VSIHQGV P +LEKG+AG++D F +   SKWL   ELL++ +DR  LV  I+ H+Q    E + EC+R         +   Q    LR ++    D    +L M +                K + I A++    + SL+ +     D + G+G G                                 + +TEAL         R G    +  S     RG ++GEAELS++HF  R    +V  S+   + G     P         T   ++   ++  ++     +P         +WV     MRT                     P++   + G+  W          + T      +      H    Q      GD   +  L                          R+ +     +      P S F +   AER   I            RY +  LR+             V  R +G +++E    NCV WLSE+S+IG +R T TL CG NPD A+  +   C C+ RK SL+CG   RC  R
Sbjct:   45 DPFYDADAHGVDLPVSIHQGVHPENLEKGTAGIIDYFKKKLLSKWLKSTELLVVCYDRQELVPAIQGHEQLGMTEKLEECSRTFDPKSTNPVPSLQYGSWLRTDVKAARDGIATNLVMRVLADDVWT------ADTKPNGIVAFYGVGGEPSLSADNPAGVDADVGLGMG---------------------------------VGTTEALAETVPLLHFRDGT---DPISDVERHRGPDIGEAELSVIHFIAR--AMKVFASICELQDGSGSAWPPVTFRSWDPTDADKVRLFIQTFLESGCDYLPAISGLPFDKMWVLVLKSMRTEGLFDK---------------PLFFEEQDGT--WAMDVDECAKQLATMFFYKDEAAFGSAHLSPAQLLESVDGDVEDYVSLV-------------------------RYDILQLPKKKTTATCP-SSFALCKQAERGNAIF-----------RYWQNGLREAMPTTEFAYEGWGVDPRGKGSDSDELIAENCVLWLSEYSYIGPNRKTVTLACGCNPDTALCNR---CRCKDRKCSLACGRISRCTLR 517          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5KG39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG39_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 7.740e-19
Identity = 96/325 (29.54%), Postives = 133/325 (40.92%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVSQVSLA*NKDTETGIGAGALVLFLRKSTSGVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFP-------GR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAF 1020
            WL+ +       + FY   AHGV+L VSIHQGVR  DLE G+ GV++ FV    S+W ME +LLL+ +DRA LV  IK  +Q+ R + IG C           + + Q    LR N     D    HL M++         +R  G      I A++    +  L      +  + +G                    G      S  P   V  + +   T   GG      + +       RG  +GEAEL LVHF        G      +  SV     + +  A +  G     G   VEV VQ+VVG  P ++WVNR F
Sbjct:   57 WLQDHSSNAVADEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGVINYFVSELDSRWRMEADLLLVCYDRAQLVPAIKGREQSGRTDKIGGCTLSFDPTSMDPIPQSQYQSWLRDNQKAARDGFAAHLAMDILDD------KRWTGDCTPRGIVAFYSVGGEAGLKTPHAADPAVSSG--------------------GGVPGGPSTSPEVPVPVDGVESSTIHSGG------DGTEXSVQRERGPKIGEAELPLVHFIVWAKKYWGLNFENWLVTSVDTDHWMIMLLAMNT-GFLKASGKGAVEVTVQKVVGGAPKYIWVNRVF 348          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5JUY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 8.820e-19
Identity = 100/327 (30.58%), Postives = 139/327 (42.51%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECARV--------LTRCQKTQSLRQNISRGSDPTRRHLGMELPRTSP*RY*QRRGGQEKTDVIKAWHFTVS-QVSLA*NKDTETGIGAGALVLFLRKSTS--------GVQAWALCRGSQRRAKSHEPR*LVSTEAL*VGTKRRGGRWGHVQEESHSCTLETRGENLGEAELSLVHFPGR*GGRQVAHSVSRHGRVDVHPAGDEHGESTTHGPRLVEVAVQRVVGEVPHFLWVNRAF 1020
            WL+ +       + FY   AHGV+L VSIHQGVR  DLE G+ GV++ FV    S+W ME +LLL+ +DRA LV  IK  +Q+ R + IG C           +   Q    LR N     D    HL M++          +R   + T       + V  +  L      +  + +G  V     STS        GV++  +  G     +   P   ++ E   +  +R  GR   +Q E        RG N+GEAELSLVHF        +  +    G           G     G   VEV VQ+VVG  P ++WV R F
Sbjct:   59 WLQDHSSDAVTDEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGVINYFVSELDSRWRMEADLLLVCYDRAQLVPAIKGREQSGRTDKIGGCTLSFEPTSTDPIPPSQYQSWLRDNQKAARDCIAAHLAMDI-------LDDKRWTGDCTPKGNVTFYGVGGEAGLKTPHAADPAVSSGGGVPG-GPSTSPEVPVPVDGVESSTMRSGGDGTEEGVVP--TLAEEDPLLHYRRGAGR--SIQRE--------RGPNIGEAELSLVHF--------IVWAKKYWGL--------NFGNWLGSGEGAVEVTVQKVVGGAPKYIWVIRVF 349          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5K590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K590_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.400e-18
Identity = 101/302 (33.44%), Postives = 134/302 (44.37%), Query Frame = 3
Query:  324 RAPASRTDRIDRGVRSGIDPLSEDPIPPSKYQPWLRSDSKAPRDGIAANLAMKILAEKGWAGEN*RDQSVALYGVAGEPGLEQGHRDRHRCWGSRIVLEEVDVGGPGMGVVQRESAQG*KS*APVAGVDRSSV--GGNKAEGREVGARSRRESLLHSRNAWRKS---RRG*AVTCSFPGEIRRPASSS*RKSARTSGRSS-CWR*ARGKYNSWS-----------KVGGGGRAESC------G*SSPLFVGK-----QGVRHENHKVRRFVLIFLLAGCNLLPAMSRLVFEKIRVVALESVR 1145
            R  + RTD+I  G     DP S D IPPS+YQ WLR   KA RDGIAA+LA+ I  +K W G+   +  VA YGV GE GL            S      V  GG     VQ   A   +  APV  V+ S+V  GG+  E   V   ++ + LLH R    +S    RG  +     GE           + +  GR+S  W       + W            K  G G  E        G    ++V +      G+R  +  V  FVL++LLAGC+ LPAM+ L F  +  +AL+SVR
Sbjct:   22 REQSGRTDKIG-GYPLSFDPTSTDAIPPSQYQSWLRDSQKAARDGIAAHLAVDIFDDKRWTGDCTPNGVVAFYGVGGEAGLRT----------SDAANPAVSSGGG----VQGGPATSPEIPAPVGSVENSTVRSGGDGTEEGGVPTVAKEDPLLHYRRGADRSVQRERGLNI-----GEAELSLVHFIVWAKKYWGRNSENWLVTSVDTDQWMIILLAMRTGFLKASGEGAVEVTVQMVVGGDPKYIWVNRVFASISGLRDSDESVSLFVLVYLLAGCDFLPAMTGLPFGTMWALALKSVR 303          
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 4.070e-18
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   91 WLEVNLPYGFGYDRFYRRDAHGVELYVSIHQGVRPLDLEKGSAGVMDIFVR*SRSKWLMEMELLLISHDRANLVSVIKEHQQAARIE*IGECAR 372
            W+  +   GF  D FY  DAHGV+L VSIHQGV P  LEKG+AGV+D F R   SKWL   ELL++ +DR  LV VIK  +Q  R E +GEC+R
Sbjct:  203 WVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGVIDYFKRQLLSKWLQPTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSR 296          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTG2_9PHAE2.660e-2826.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6D9_9PHAE4.040e-2826.42Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAK2_9PHAE1.980e-2030.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JHH4_9PHAE1.790e-1930.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5E1_9PHAE4.210e-1931.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJH5_9PHAE6.710e-1924.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG39_9PHAE7.740e-1929.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUY6_9PHAE8.820e-1930.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K590_9PHAE1.400e-1833.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTD3_9PHAE4.070e-1854.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:241344..245007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2368
Hectar predicted targeting categoryother localisation
Exons3
Cds size375
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791332.0629036-UTR-P-littoralis_Contig64:241343..2416441680791332.0629036-UTR-P-littoralis_Contig64:241343..241644Pylaiella littoralis U1_48UTRP-littoralis_Contig64 241344..241644 -
1680791332.0754378-UTR-P-littoralis_Contig64:241832..2422961680791332.0754378-UTR-P-littoralis_Contig64:241832..242296Pylaiella littoralis U1_48UTRP-littoralis_Contig64 241833..242296 -
1680791332.100863-UTR-P-littoralis_Contig64:242671..2438451680791332.100863-UTR-P-littoralis_Contig64:242671..243845Pylaiella littoralis U1_48UTRP-littoralis_Contig64 242672..243845 -
1680791332.1188662-UTR-P-littoralis_Contig64:244953..2450071680791332.1188662-UTR-P-littoralis_Contig64:244953..245007Pylaiella littoralis U1_48UTRP-littoralis_Contig64 244954..245007 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791332.0855937-CDS-P-littoralis_Contig64:242296..2426711680791332.0855937-CDS-P-littoralis_Contig64:242296..242671Pylaiella littoralis U1_48CDSP-littoralis_Contig64 242297..242671 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.50.1prot_P-littoralis_Contig64.50.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 242297..242671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.50.1

>prot_P-littoralis_Contig64.50.1 ID=prot_P-littoralis_Contig64.50.1|Name=mRNA_P-littoralis_Contig64.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MFFFKNYAAFLSSGRTAGIILAGVNDDVQNEVDVIRFVILRLGGQRDTAP
CPGFESLCLQSEWVEYRLEVLAGWPERDDTKKNYYGNGWGVDPKGMRRKN
SQGAIAFSGCLSIRLSALTERHKR*
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mRNA from alignment at P-littoralis_Contig64:241344..245007-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.50.1 ID=mRNA_P-littoralis_Contig64.50.1|Name=mRNA_P-littoralis_Contig64.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3664bp|location=Sequence derived from alignment at P-littoralis_Contig64:241344..245007- (Pylaiella littoralis U1_48)
AGCACAGGCAACAGGGTGCGAAGTAGGGACGAAGCTGAACTTCATTTGAT GAAGGTGTGCTCCTCAGCTGTGGGATATTGTATGGCAACGTGATTTTCGT CGGATTTACCGCGGTAGAAGTTGTATTTCAGGCTTTGCCTGTAGCCGACC ACCAAACCCGGTGGTTGGAATCTCAGAGAGCTTGTCATGAACACTTCCCT CTATATGAGGTTGGCGTGCCTCAATCTAGTCCGTTGGTGGCACGTAGCCA TCTCTGCCTGCTAACTATTGCAGAAGGTTTGATTCGATTTGGTGGTGCTA GAGTTTGAGATGACGAGATTGGAGTTCAAATTTATTTCCAACCCAGCCAC CGGTATGCGGAGAAACCAGCACCTAACTCCATATACATACGTATACGGTA CACCTTTGAGACCGTTGGCTGCCCGCAGCGATCACCGACACCTTTGCGTA CATGCATAGTGCTAATTGCACGTTGACAGCTGTACTTATGATATATCATA ACAAAACATTCAAATGATTACGTAGCATGAACGTAAAATGTAGACAAGGT TCTGCTGGCGTCTCGGAAACCGGGTGCTACATTTCCACGTACATTCCTTT CTGACTCCTACCTACCAGGGGGGCACGAGGACGAAATTACGCAAATACTG GCAGGAGGTTACAGAGATATGATTGTGTATACTTCCTGCTTCTACAGTAG AAACCCTTCAGGCTGCTCCTTGAGGAATCCTCGCAAGATCCTGGAAAGGG GGAGCGGTGTTGTTTAGGTTGTCTTGCCATTACAATCCTTACGCTCAGGA TTTGATGCAGTTGCTTACTCCTGCTGTATTTACTCGTGTAGCTGAAAGCC CGTGGAAAGTGTACGCGTCCAAGTGTTGGATTATAGTTTGTAGGGTTGCG GTACGCAGGGTTGCATGTGCAGGGCCGCGTGTGGTGTTCATGTTCATGTA CGTCCTGTTTTCCACCTCGATTTCGCAGGCCGGCAAGTCAAGACCAACAT CGTGACGTTTCGGTGTTTTCAGTTCCGCCTGTCTATACGAGAAGGATAAG GGCCTGACAAATATATAGTGCCAACCTTCTTTGAACAAAAAGCCTACCCC TCTCACAACCCCCTACCCAGCCTCACATGCCTATTGCACACATGTCGCCA CGCACACTGCAGGGGCAAAATACGCCAACAGCATACAAGGCCCCTTTTTG GCTTGAAGTAAATCTCCCTTATGGGTTCGGCTACGACCGGTTCTACCGGC GTGACGCTCATGGGGTGGAGTTATATGTGTCAATCCATCAAGGCGTGAGA CCTCTCGACCTGGAGAAAGGGAGTGCAGGGGTTATGGACATCTTCGTGAG GTAGTCGCGCTCGAAGTGGCTGATGGAGATGGAGCTGCTTTTGATATCTC ACGATCGAGCAAATCTTGTGTCGGTCATCAAAGAGCACCAGCAAGCCGCA CGGATAGAATAGATCGGGGAGTGCGCTCGGGTATTGACCCGTTGTCAGAA GACCCAATCCCTCCGTCAAAATATCAGCCGTGGCTCCGATCCGACTCGAA GGCACCTCGGGATGGAATTGCCGCGAACCTCGCCATGAAGATACTAGCAG AGAAGGGGTGGGCAGGAGAAAACTGACGTGATCAAAGCGTGGCACTTTAC GGTGTCGCAGGTGAGCCTGGCTTAGAACAAGGACACAGAGACCGGCATCG GTGCTGGGGCTCTCGTATTGTTCTTGAGGAAGTCGACGTCGGGGGTCCAG GCATGGGCGTTGTGCAGAGGGAGTCAGCGCAGGGCTAAAAGTCATGAGCC CCGGTAGCTGGTGTCGACAGAAGCTCTGTAGGTGGGAACAAAGCGGAGGG GAGGGAGGTGGGGGCACGTTCAAGAAGAGAGTCACTCCTGCACTCTCGAA ACGCGTGGCGAAAATCTCGGCGAGGCTGAGCTGTCACTTGTTCATTTCCC GGGGAGATAAGGCGGCCGGCAAGTAGCTCATAGCGTAAGTCGGCACGGAC GAGTGGACGTTCATCCTGCTGGCGATGAGCACGGGGAAAGTACAACTCAT GGTCCAAGGTTGGTGGAGGTGGCCGTGCAGAGAGTTGTGGGTGAAGTTCC CCACTTTTTGTGGGTAAACAGGGCGTTCGTCATGAGAACCACAAGGTCCG TCGTTTCGTCCTGATCTTCCTCCTGGCGGGGTGCAACCTCCTACCGGCCA TGTCCCGTCTGGTCTTCGAGAAAATACGGGTCGTCGCCCTGGAGAGCGTA AGGGCTTGTTGGAACGCCCATTCTTTTAGCAGGAGATGTAGTTTTGAACC GTGGACATCGACGAGTATTCCAAGCTTGTGGGGACCATGTTCTTTTTCAA GAATTATGCTGCCTTCCTTAGCAGCGGGAGAACCGCGGGCATCATACTCG CCGGCGTCAACGACGATGTACAGAACGAGGTCGACGTCATCCGCTTTGTT ATCCTTAGGCTCGGTGGCCAGAGGGATACAGCCCCTTGTCCGGGTTTCGA GTCATTGTGCTTGCAGAGCGAGTGGGTCGAATACCGTCTAGAGGTGCTGG CAGGATGGCCTGAAAGAGACGATACAAAAAAAAACTATTACGGAAACGGG TGGGGTGTCGACCCGAAGGGTATGAGGCGGAAGAATTCTCAGGGCGCAAT TGCGTTCAGTGGTTGTCTGAGCATTCGTTTATCGGCACTGACAGAGCGAC ACAAACGCTGACGTGTGGTCACAACCCGGACCTGGCCGTCGTCCGTCAAT ATCAGTCTTGCGGCTGTGAGAGGAGGAAATTCTCGCTTTCCTGCGGCTGC AGGGGTCGATGCAATGCGCGTTCGTCACCGCTGTGCCCGAGGCACCGCCC AATCCGCCTCTTTCATCAGTCGTCGCGAATGCCCTCGCGCTCTTCTCCGC TGCCGTTGGCGGCGCAGCTACGGCTGGTGGGGGGGCTGCGGGCCATTGGA GAATTGTAAGCCCGGAAGTCAAACAGGAGGTCGGCCACATCAAGCCTGTT TGGACTTTTCCGGCGGTGACTCCGACGGTGTCGAACTGCTAGAATCGGAC GAGTGCCACGACAACGACAGAGATTGGGACGCGTCGTCTGGGGGGTGTTG GATTGGGGCCGGGGAAACGGATACGGGGAAGAAGGAGATAGCACGGAGAT AGTGGACGAAGCCTGGAGCTGAAAGGTGAGGTGTACCGCGGTGTAGTGCG TGTTGTTACTTGTACTGTTTTTGAGCTTGAACCTGGTGCTCGTATAGTTT CCCACGCTTGCCGGCACAAGCAGTGGTGTACTCATCCAGAATATCCACTT ATTTGCAGTTATTTGATTGACTGTCTTTACCGTGTTGTCACCCCCTTTTT GACGGATCAACAGACCAACAGGCCCTATCGCGGATGAATAATTTCATGGC GTCGGATGGTGCAAAGGAGCTCATGCGGACAAGAACGACACTGGGCTGTT CGGATCGGGCACCCGATTTTTCGGAGTTGTTTTTCACTATACTGAGCAGG GCAGGGGAGAGAAAGTACACGCGTTGGCGTTTTATAGGCACCGCTTCCGG CACCTGGTACCGTGTGTTTCCTTAGTCGTCCTGGGCGTCTCTTTTCCTTC GGCGGAAGAGAATTAAAAGCGGCAGCTGTATTTGCAAGATGTGTCAGCCC ATTGCTGTTGTTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:241344..245007-

>mRNA_P-littoralis_Contig64.50.1 ID=mRNA_P-littoralis_Contig64.50.1|Name=mRNA_P-littoralis_Contig64.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig64:241344..245007- (Pylaiella littoralis U1_48)
ATGTTCTTTTTCAAGAATTATGCTGCCTTCCTTAGCAGCGGGAGAACCGC
GGGCATCATACTCGCCGGCGTCAACGACGATGTACAGAACGAGGTCGACG
TCATCCGCTTTGTTATCCTTAGGCTCGGTGGCCAGAGGGATACAGCCCCT
TGTCCGGGTTTCGAGTCATTGTGCTTGCAGAGCGAGTGGGTCGAATACCG
TCTAGAGGTGCTGGCAGGATGGCCTGAAAGAGACGATACAAAAAAAAACT
ATTACGGAAACGGGTGGGGTGTCGACCCGAAGGGTATGAGGCGGAAGAAT
TCTCAGGGCGCAATTGCGTTCAGTGGTTGTCTGAGCATTCGTTTATCGGC
ACTGACAGAGCGACACAAACGCTGA
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