prot_P-littoralis_Contig64.31.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.31.1
Unique Nameprot_P-littoralis_Contig64.31.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length137
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.740e-77
Identity = 125/135 (92.59%), Postives = 126/135 (93.33%), Query Frame = 0 
Query:    1 PDTSHLLITKSITTMSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 135
            P  S   IT S TTMSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK
Sbjct:   32 PPLSVYFITNSTTTMSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 6.510e-75
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:   15 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 136
            MSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.770e-68
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:   15 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 133
            MSGKGKGGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 9.150e-68
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:   15 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 133
            MSGKGKGGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 2.480e-67
Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:   15 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 132
            MSGKGKGGRGKK  +RSAKAGLQFPVGR+GRF+K GKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A8J4LZJ7_9CHLO (Histone H2A n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LZJ7_9CHLO)

HSP 1 Score: 204 bits (519), Expect = 4.520e-65
Identity = 105/134 (78.36%), Postives = 119/134 (88.81%), Query Frame = 0 
Query:    1 PDTSHLLITKSITTMSGKGKG-GRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 133
            P T  L + + + TM+G+GKG   GKK+V+RSAKAGLQFPVGR+ R+LK GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RI+PRHIQLA+RNDEEL KLLG+VTIASGGVLPNIHAVLLPKK+
Sbjct:   26 PLTKSLKVVRDVATMAGRGKGKSAGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIIPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKS 159
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 4.880e-65
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0 
Query:   15 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 134
            MSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A7S3CML3_9SPIT (Histone H2A (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CML3_9SPIT)

HSP 1 Score: 203 bits (516), Expect = 5.350e-65
Identity = 108/135 (80.00%), Postives = 121/135 (89.63%), Query Frame = 0 
Query:    3 TSHLLITKSITTMSGKGKG-GRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 136
            +S+ L+  +   MSGKGKG   GKK+V+RSAKAGLQFPVGRV R+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG VTIA+GGVLPNIH+VLLPKK+ +K
Sbjct:    7 SSYPLLLNTFNNMSGKGKGRAPGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGNVTIAAGGVLPNIHSVLLPKKSAEK 141
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.150e-64
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:   15 MSGKGKGGRG-KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 135
            MSGKGKGGRG KKS T SAKAGLQFPVGR+GR+L+ GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 201 bits (511), Expect = 2.230e-64
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:   17 GKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 136
            GKGK   GKK+V+RSAKAGLQFPVGRV R+LK GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ KK
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G193_ECTSI1.740e-7792.59Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FWI9_ECTSI6.510e-7597.54Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A6H5KG79_9PHAE1.770e-6890.76Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI9.150e-6890.76Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI2.480e-6789.83Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A8J4LZJ7_9CHLO4.520e-6578.36Histone H2A n=4 Tax=Volvox reticuliferus TaxID=173... [more]
A0A6H5KGY1_9PHAE4.880e-6597.50Integrase catalytic domain-containing protein n=7 ... [more]
A0A7S3CML3_9SPIT5.350e-6580.00Histone H2A (Fragment) n=1 Tax=Strombidium rassoul... [more]
A0A6U2JFS4_9STRA2.150e-6486.07Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A061QUG5_9CHLO2.230e-6486.67Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 55..70
score: 90.36
coord: 84..98
score: 74.98
coord: 112..130
score: 76.04
coord: 26..48
score: 69.69
coord: 70..83
score: 90.54
IPR002119Histone H2ASMARTSM00414h2a4coord: 17..135
e-value: 8.5E-79
score: 277.8
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 17..135
IPR002119Histone H2ACDDcd00074H2Acoord: 27..132
e-value: 2.46094E-68
score: 199.869
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 22..101
e-value: 3.4E-15
score: 56.6
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 14..136
e-value: 1.8E-63
score: 214.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 15..135
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 104..136
e-value: 2.6E-19
score: 68.7
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 19..133
e-value: 1.0E-52
score: 177.4
NoneNo IPR availablePANTHERPTHR23430:SF308HISTONE H2AXA-RELATEDcoord: 17..135
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 34..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:150589..150999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.31.1mRNA_P-littoralis_Contig64.31.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 150589..150999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.31.1 ID=prot_P-littoralis_Contig64.31.1|Name=mRNA_P-littoralis_Contig64.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=137bp
PDTSHLLITKSITTMSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAG
KYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAV
RNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS