prot_P-littoralis_Contig64.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.5.1
Unique Nameprot_P-littoralis_Contig64.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length164
Homology
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.850e-38
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MTSAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 80
            M S K TYN MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPAPK
Sbjct:    1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.490e-36
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    3 SAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAP 79
            +AK TYN MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMR ALKKG ESGKFIK+K+SYKLSPEAKKPAP
Sbjct:   96 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.760e-34
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    2 TSAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 78
            T+AK TY+ MVFDAIK+LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA
Sbjct:    3 TTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 3.960e-34
Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 0
Query:   11 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 80
            MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKG E+GKFIKVKSSYKLS EAKKP PK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.530e-33
Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 0
Query:   11 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPK 80
            MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKG ESGKF+K+K+SYKLS EAKKPAPK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.010e-31
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0
Query:   11 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 78
            MVFDAIK+LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 7.430e-26
Identity = 51/62 (82.26%), Postives = 58/62 (93.55%), Query Frame = 0
Query:   11 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSP 72
            MVFDAIK+LKERNGSSIQA+KKSITATYPAL+FTPHQMRSALKKG E+GKFIKV+ +  L+P
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLAP 62          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 2.150e-24
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    7 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 77
            TY+ M   AI +LKERNGSS+ AIKK I ATYP LNF PHQ+R ALKKGTE+G FIKVK+SYK+SPEAKKP
Sbjct:    3 TYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.670e-22
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    7 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPAPKP 81
            TY+ M  +A+K+LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKG ESGKFIKVK+SYKLS   ++PA KP
Sbjct:    3 TYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKP 77          
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.770e-20
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    7 TYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGTESGKFIKVKSSYKLS 71
            TY+ M  +A+K+LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKG ESGKFIKVK+SYKLS
Sbjct:    3 TYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ80_ECTSI8.850e-3887.50Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KCU1_9PHAE7.490e-3688.31H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4I5_ECTSI1.760e-3484.42H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LQ75_ECTSI3.960e-3494.29H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KST0_9PHAE2.530e-3390.00H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
A0A6H5JHR9_9PHAE2.010e-3188.24H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9S6_9PHAE7.430e-2682.26H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI2.150e-2473.24H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJB8_ECTSI1.670e-2269.33H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIM8_9PHAE4.770e-2072.31H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 2..67
e-value: 4.3E-21
score: 86.1
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 6..69
e-value: 1.1E-18
score: 67.2
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 4..72
score: 27.251854
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 2..72
e-value: 2.0013E-13
score: 60.3275
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..86
e-value: 1.7E-20
score: 75.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..163
NoneNo IPR availablePANTHERPTHR11467:SF130HISTONE H1coord: 5..158
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 5..158
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 5..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:33085..35827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.5.1mRNA_P-littoralis_Contig64.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 33002..35869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.5.1 ID=prot_P-littoralis_Contig64.5.1|Name=mRNA_P-littoralis_Contig64.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp
MTSAKTTYNTMVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRS
ALKKGTESGKFIKVKSSYKLSPEAKKPAPKPKKKVVKKKVVKKKVVKKKV
VKKVAKKPAVKKTVAKKPAVKKTVAKKTTGVKKTVTKKKPAAGAKKPTTK
KATPKKKPAPQKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf