prot_P-littoralis_Contig64.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.4.1
Unique Nameprot_P-littoralis_Contig64.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length133
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A1J3ENA7_NOCCA (Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ENA7_NOCCA)

HSP 1 Score: 205 bits (521), Expect = 5.000e-66
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 0 
Query:   16 NLFSSLKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            NL  S KFK P+  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   15 NLSFSRKFKFPEK-MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 204 bits (520), Expect = 6.030e-66
Identity = 109/118 (92.37%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:   15 HNLFSSLKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            H   SS K   P +NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   11 HKFVSSNK---PTSNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A2J6LJW1_LACSA (Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LJW1_LACSA)

HSP 1 Score: 204 bits (520), Expect = 1.090e-65
Identity = 106/124 (85.48%), Postives = 114/124 (91.94%), Query Frame = 0 
Query:    9 RPPSHNHNLFSSLKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            +PP+  H+ F    F++ +  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   20 KPPNWRHHHFHLHFFESTKFQMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 143
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A453N2X0_AEGTS (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453N2X0_AEGTS)

HSP 1 Score: 202 bits (514), Expect = 3.820e-65
Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:   21 LKFKTPQAN--MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            L F+TP A   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    4 LHFQTPSAPPIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 117
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: UPI001EEB9003 (histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB9003)

HSP 1 Score: 202 bits (515), Expect = 5.880e-65
Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = 0 
Query:   14 NHNLFSSLKFKTPQA--NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            NH++FS + ++T +    M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   21 NHSVFSLVVYQTSETYLKMTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 141
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A8J1ITQ4_XENTR (Histone H4 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A8J1ITQ4_XENTR)

HSP 1 Score: 201 bits (511), Expect = 1.170e-64
Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 0 
Query:   21 LKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            + FK     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 IAFKEASVRMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 119
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A1D6IAU4_MAIZE (Histone H4 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6IAU4_MAIZE)

HSP 1 Score: 201 bits (512), Expect = 1.480e-64
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 0 
Query:   24 KTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            + P A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   29 RQPAAEMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 137
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: UPI000A35805F (histone H4 n=1 Tax=Heterocephalus glaber TaxID=10181 RepID=UPI000A35805F)

HSP 1 Score: 201 bits (510), Expect = 1.560e-64
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0 
Query:   23 FKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            F   +A+MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 FSLARASMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 117
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A452ZB17_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZB17_AEGTS)

HSP 1 Score: 201 bits (510), Expect = 2.080e-64
Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0 
Query:   10 PPSHNHNLFSSLKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            PP    ++ SS   +   A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    4 PPLLQPHISSSAARRGSSATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126
[Close]
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Match: A0A453FVP7_AEGTS (Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453FVP7_AEGTS)

HSP 1 Score: 201 bits (510), Expect = 2.220e-64
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:   21 LKFKTPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            L   + QA MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   17 LSSYSEQAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J3ENA7_NOCCA5.000e-6692.31Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens... [more]
A0A3L6V663_9STRA6.030e-6692.37Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A2J6LJW1_LACSA1.090e-6585.48Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID... [more]
A0A453N2X0_AEGTS3.820e-6592.98Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R... [more]
UPI001EEB90035.880e-6586.78histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35... [more]
A0A8J1ITQ4_XENTR1.170e-6491.96Histone H4 n=1 Tax=Xenopus tropicalis TaxID=8364 R... [more]
A0A1D6IAU4_MAIZE1.480e-6494.50Histone H4 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D... [more]
UPI000A35805F1.560e-6493.64histone H4 n=1 Tax=Heterocephalus glaber TaxID=101... [more]
A0A452ZB17_AEGTS2.080e-6486.18Histone H4 n=2 Tax=Aegilops tauschii subsp. strang... [more]
A0A453FVP7_AEGTS2.220e-6492.86Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 91..105
score: 91.96
coord: 34..45
score: 95.59
coord: 118..129
score: 97.79
coord: 49..68
score: 93.38
coord: 106..118
score: 90.05
coord: 69..89
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 45..119
e-value: 1.8E-29
score: 113.9
IPR001951Histone H4CDDcd00076H4coord: 47..130
e-value: 2.60045E-47
score: 145.722
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 31..132
e-value: 2.5E-58
score: 196.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 15..129
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 68..125
e-value: 1.5E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 25..132
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 25..132
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 44..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:25347..25745 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.4.1mRNA_P-littoralis_Contig64.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 25347..25745 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.4.1 ID=prot_P-littoralis_Contig64.4.1|Name=mRNA_P-littoralis_Contig64.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp
SSPRGACHRPPSHNHNLFSSLKFKTPQANMSGRGKGGKGLGKGGAKRHRK
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSV
TYTEHARRKTVTAMDVVYALKRQGRTLYGFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold
IPR035425CENP-T/H4_C
IPR019809Histone_H4_CS