prot_P-littoralis_Contig64.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig64.1.1
Unique Name	prot_P-littoralis_Contig64.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	120

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 6.810e-69
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK GDKK  NKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.890e-63
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK GDK  K KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.070e-61
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGD-KKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKK  D KK K KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.680e-60
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDK--KTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK G+K    K KR ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 193 bits (490), Expect = 7.230e-60
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGD-KKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKK  D KK K KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 188 bits (477), Expect = 8.990e-60
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSKK+AKAPKK G K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTS 113

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 184 bits (467), Expect = 3.210e-58
Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAKAPKK        KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.080e-57
Identity = 98/115 (85.22%), Postives = 109/115 (94.78%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSKK+A APKK G K+++ KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S
Sbjct:    8 MAKTPSKKAA-APKKAGGKRSR-KRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSS 120

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 177 bits (449), Expect = 2.020e-55
Identity = 98/119 (82.35%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    1 MAKTPSKKS-AKAPKKV--GDKKTKNK-RTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTS 115
            MAKTPSK++ AKA KK   GDKK ++K R ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSS 119

[Close]

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Match: A0A7R9ZTA9_9STRA (Histone H2B n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZTA9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.210e-55
Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 0

Query:    3 KTPSKKSAKAPKKVGDKKTKNK-RTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            KTPSK+SAKAPKK     +K+K RTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:   64 KTPSKQSAKAPKKASTGSSKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 178

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig64.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	6.810e-69	97.41	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	6.890e-63	87.93	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	1.070e-61	88.89	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A485K2U0_9STRA	3.680e-60	85.59	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
A0A836CJT3_9STRA	7.230e-60	88.89	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
H2B_OLILU	8.990e-60	85.22	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
B7FWR8_PHATC	3.210e-58	83.62	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A6U6DWX5_9STRA	1.080e-57	85.22	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
B8BX20_THAPS	2.020e-55	82.35	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A7R9ZTA9_9STRA	2.210e-55	83.48	Histone H2B n=1 Tax=Craspedostauros australis TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 70..87 score: 56.83 coord: 29..47 score: 84.56 coord: 87..100 score: 90.61 coord: 48..68 score: 67.66 coord: 100..113 score: 92.65
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..115 e-value: 2.2E-69 score: 246.5
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 4..116
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 84..106
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..92 e-value: 7.6E-18 score: 65.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..117 e-value: 4.1E-56 score: 190.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR23428:SF252	HISTONE H2B	coord: 4..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig64	contig	P-littoralis_Contig64:1022..1381 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig64.1.1	mRNA_P-littoralis_Contig64.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig64 1022..1381 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig64.1.1 ID=prot_P-littoralis_Contig64.1.1|Name=mRNA_P-littoralis_Contig64.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bp
MAKTPSKKSAKAPKKVGDKKTKNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSSYSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold