prot_P-littoralis_Contig637.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig637.42.1
Unique Nameprot_P-littoralis_Contig637.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length185
Homology
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BLAST of mRNA_P-littoralis_Contig637.42.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.040e-47
Identity = 89/128 (69.53%), Postives = 105/128 (82.03%), Query Frame = 0 
Query:   56 WREKDFLVDALLSIVGGSIEDGEGGRIDSGSGNGRVDVVGSGSIGEISNVRVSQDSSAGGESLEWTDALPLEDAEVSKLLQELALGGGEDDASLGDFDEDFLGRPIDLEEVFSSSPKSNLADAHGSTR 183
            WR+K+FLV+ALLS+ GGS EDGEGG +D GSGNG V+V G G  G+ISNV V++ S+ GGE LEW DA+PLE+A +SKLLQELA+  GEDDASLGDFDE+FL R ID +EVF SSPKSNLADA G TR
Sbjct:  339 WRKKEFLVNALLSVAGGSSEDGEGGLVDHGSGNGPVNVAGDGGDGKISNVWVNRVSATGGEGLEWIDAVPLEEAVMSKLLQELAVEDGEDDASLGDFDEEFLARSIDFDEVFPSSPKSNLADAQGPTR 466
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig637.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9K2_9PHAE4.040e-4769.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig637contigP-littoralis_Contig637:144317..145331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig637.42.1mRNA_P-littoralis_Contig637.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig637 143243..145597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig637.42.1 ID=prot_P-littoralis_Contig637.42.1|Name=mRNA_P-littoralis_Contig637.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MWSPDRRRGPDHLQSSRETCSWEWIHPQRIATTARMEVILQRQSKVTRMN
WTMTTWREKDFLVDALLSIVGGSIEDGEGGRIDSGSGNGRVDVVGSGSIG
EISNVRVSQDSSAGGESLEWTDALPLEDAEVSKLLQELALGGGEDDASLG
DFDEDFLGRPIDLEEVFSSSPKSNLADAHGSTRK*
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