mRNA_P-littoralis_Contig637.38.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 302 bits (774), Expect = 9.140e-90 Identity = 225/542 (41.51%), Postives = 284/542 (52.40%), Query Frame = 3
Query: 135 EDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNA-TALHFAAAFEGP-GDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
EDR+RLDGFE+EIF LV++ ATS QWKEWLRAP EHAAA+GN+D FTRLMDAGA+ AGWRGC+ RTLLGAAA G++EKMV L AGA D++ +F G+R + L+I GAD + D +PLH+A+ G R+V L++ A +AKT+ XXXXX A + L + +R G S L AA RG V++ALL K SG D ALH+AA+ +GP DNG+ VR LL AGADV A T+ C T L++A +R+I S GTI ALLE GAN++A ++ PLH AC S A VELLLRWGAD+ L +G T +V + DD D E DN+RI MLAR PA RSWRRRGWLVL R P++VQ I N + +V+ V G + S E + MVD LVGRL+ +EA+ VFRLVVG+L
Sbjct: 9 EDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGER--------------------EALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTAS-------------------------------QXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTN--GSRSPLEIAANRGQADVVKALL---DKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDP-CDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELE----------ADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQ------IANGSSXXXXXXXXXXXXNGNSAKVAKVSGESS-SRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 302 bits (773), Expect = 3.480e-89 Identity = 263/541 (48.61%), Postives = 321/541 (59.33%), Query Frame = 3
Query: 135 EDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAF-EGPGDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
EDR+RL GFE+EIF L+++EAT QWKEWLRAPLEHAAA+GN+DLFTRLMDAGA+ AGWRGCH RTLLGAAA G++EKM+ LL AGA D++ +F G+ SAL+ AA GA+ + L+IAGAD + D G +P XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX + S L AA RG+ VL+ALL ++S + D ALH+ A+F E D G+ VR LL AGADV T +C+TPLH+A +R +TS+GTI ALLE GAN++A + PLH AC VELLLRWGADE L + GDT D+VG E +D D ++R DN+RI MLARAPADRSWRRRGWLVL R P++V ++ + + G + K+ R VS G + D E + MVD LVGRLVG+EAE +FRLVVG+L
Sbjct: 9 EDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGES----ESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSR----------CSPLEIAAGRGHADVLKALLD--KRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTND-SCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDD----------EEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIA-----NGSSSSSSISRINGNSAKVAR--VSGQGSSRDDE----ETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 281 bits (720), Expect = 3.530e-81 Identity = 259/543 (47.70%), Postives = 309/543 (56.91%), Query Frame = 3
Query: 135 EDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGPG-DNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVG--GWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
+DRTR+DGFEVEIF LV++EATS QWKEWLRAPLEHAAA GN+ LFTRLMDAGA AGWRGC RTLLGAAA KN+K++ ALL AGAK D++ +F R SAL+ AA GAE +K L+IAGA+ P+ G XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX + +A L ++ A +G TALH AA E G D G+ VR LL AGADV A T+ PLHIA ++ S+GTI ALLE GA+V+ D +R PLH AC +S AVELLLRWGADE L D T D++G G D GD +G +RI MLARAPADRSWRRR WLVL R P++V+++ + R G+ +G + G +TK+ R GG G E + MVD LV RLVG+EA+ +FRLVVG+L
Sbjct: 11 QDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKR----ESALHLAAARGAEEASKALMIAGAN---PNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGY-------------TALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADG------------QRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSS--VGSSSSSNGNSTKLARFSGEDSGG------GERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 261 bits (666), Expect = 6.400e-74 Identity = 246/541 (45.47%), Postives = 294/541 (54.34%), Query Frame = 3
Query: 135 EDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGA-DGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGPGDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
+ R+RLDGFE+EIF LV++E TS QWK+WL+ PLEHAAA+GN+DLFTRLMDAG G GWRGC+ RTLLGAAA GK++K+V ALL+AGA D++ +F + SAL+ AA GAE +K L++AGAD L D G Y XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX + D TA+H A GP DNG VR LL AG V A TPLH A R+I S T LALLE GAN +A D PLH AC HS AVELLLRWGADET + GD D++G + D GD E V D++RI MLARAPADRSWRRRGWLVL R P++VQ+ A+ G ++ K+ R +GG + E + VD+ LVG L+G+EA+ +FRLVVG+L
Sbjct: 10 DGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEG----KSALHVAAARGAEEASKALMVAGADPNLFDCKG-----------------YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVY---DRGDVNDEDVK-------ADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQI---------ANKGSRVNRNSCPAKVARVSGEDLGGDEE------EAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 242 bits (617), Expect = 3.830e-66 Identity = 224/539 (41.56%), Postives = 280/539 (51.95%), Query Frame = 3
Query: 150 LDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALL-KAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGP------GDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVV 1745
LDG EVEIF LV+++ATS+QW+EWLRAPLEHAAA+GN+DLFTRLMDAGADGSAGWRGCH RTLLGAAA GKNE++V LL + GA D++ F GDR SAL+ AA + +++ LLIAGAD L D G +PLHVA+ G R++ +L+ G KT+ XXXXXXXXXXX DR E XXXXXXXXXXXXXXXXXXXXX A ++ ATALH AA P E V TPLH +++S T +A + PLH ACY S A AV+LLLRWGAD+T+ DG G+TA D VG W+ + + +++ + + D +R +LA AP DR WRRRGWLVLCR YP+KVQ+ D + T K R G D E+G E ++ RLVG +VG++A+ VFR+VV
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCF-GDRLE---SALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADTDCGDRF-ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAW------------NDEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECVW-------TPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLK--ADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGC---------STAKAARVSEEDSGECGD------EDGDEARIELGRLVGHIVGLQADVVFRMVV 562
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 248 bits (634), Expect = 7.620e-65 Identity = 214/546 (39.19%), Postives = 273/546 (50.00%), Query Frame = 3
Query: 126 SAGEDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKT---SGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGPGDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
S EDR+ LDGFEVEI LV++ ATS QW++WLR PLEHAAAKGN+DLFTRLMDAG+ G GWRGC+ RTLLGA A G++EKMV ALL+AG D + F+ + SAL+ AA D LP G LHVA+ G R++ L++ GA +AKT L XXXXXXXXXXXXXX + +G V + R D G S L A G+ +++A L G +T D T LH AA +G V LL AGADV A + + TPLH+A R+++S TI A + PLH AC +S A V+LLL WGAD T +G G D++ + D D E D++ + MLARAPAD+SWRR GWLVL R P++VQ IGN GG +TK+ R V G EN + MVD+ L+ RLVG+EA+ +FRL+VG+L
Sbjct: 6 SKREDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEG----KSALHVAA--------------ARDPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLP-----------------VPTGGRPDN--------GGWSSLPNAVCCGHATIVKAFLETGIDVD---TTDDQAYTVLHRAADMDGC-----VVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIE----------ADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQ------IGN---RGGSGSSNSCSTKLAR-----VSGKDSSRDDELEN--QMMVDWRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 209 bits (533), Expect = 5.750e-55 Identity = 194/571 (33.98%), Postives = 269/571 (47.11%), Query Frame = 3
Query: 141 RTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPD-SDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDK-FKVR---GAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGPGDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGA---VELLLRWGADETLEDGLGDTATDLV------------GGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDA-------DMGGHADQEGETTKMVRRRVSPVG---GAADGSAGGTENGKETMVDFAR---LVGRLVGIEAECVFRLVVGYL 1754
R L+G E+EIF L+ AT QW EWLRAPLEHAAA+GN+ L RL++AGA+G AGWRGC RT+L AAA G N +V LL +G D++ V S R SAL+ A+ G EA AK L+IAGAD D D LHVA G LV+ L++ GA PN++T D G + + V++L R+ +R GA LG + + A +G++GV+EA++ +G +T TALH A + V LL+AGADV A A + TPL + S ++ALL+RG NV+ + + LH C G V+LLLRWGA ET + G T +D++ GG D G R + +R +LARAPADR+WRRR WLV+ R + + + G+D ++ H + +G+ +K+ + VG G DG G +G+ T A LV LVG+E+E VFR +V +L
Sbjct: 7 RALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVV----SLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDAL--DSRGVSPLMVASEGGHC----------STVEALLRAGADMNLRHAGGAHLGMTA-MDVAVSKGHVGVIEAIVENGGNVR---ATDTYGLTALHHARGAQ-------AVDVLLDAGADVNAKACPALHGFTPLSVCVMDN--SCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGG---DGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGERG--RDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 208 bits (529), Expect = 1.890e-52 Identity = 191/565 (33.81%), Postives = 252/565 (44.60%), Query Frame = 3
Query: 135 EDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPD------------------SDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFA--------SCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGP-GDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRRQQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLS--ADCRIGNDADMGGHADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLV 1742
EDR+R+DGF++EIF LV++EATS QWKEWLRAPLEHAAAK L T ADG W +EKMV LL AGA D + +F + SAL+ GAE + L+IAGAD TL D + + + VA+ G R++ L++ AD +AKT+ ++ A + L + GA G S L AA RG+ VL ALL DN + FA + +GP DNG+ VRALL GADV A T++ C++PLH+A R+I S G I + PLH AC HS VELLLRWGADE L + +G T D++ + D D ++R D++RIG M+A PADRSWRRRGWLVL R P++VQ++ + G K+ R VS + D TE + +VD LVGRLVG+EA+ + RLV
Sbjct: 9 EDRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHT------ADGH--W----------------SEKMVRTLLTAGATDDANVLFGVEH----ESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTAS-------------------------------------QSTPLHLAASEGRALCLSELLLGAN-NHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALL-----------DKDN----IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSI-CASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDD----------KEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVAR--VSGESSSRDDER--TEG--DMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.220e-50 Identity = 188/423 (44.44%), Postives = 234/423 (55.32%), Query Frame = 3
Query: 114 MMPTSAGEDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGC-HR-RTLLGAAARG-KNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPDSDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFE-GPGDNGNTVRALLNAGADVEAVLTEAA---NCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACYHSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDD 1361
M + EDR+R+DGFE+EIF LVK+EATS QWK+WLR PLEHAAAKGN+DLFTRL+DAGA G GW+G HR RTLLGAAA G K++ MV ALL+AG ++ F R SAL+ GAE +K L++AGAD L + DG +PLH+A+ G R++ L++ +A + XXXXXXXXXXX D GE XXXXXXXXXXXXXXXXXXXXX RG +L+A L S+ + T TALH+AA + DNG+ VRALL AGADV V T+A + TPLH+A +R++ S I + PLH AC VELLLRWGADE L++ DT D +G W +D
Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATR----ESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLE-TXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----------RGNAAMLKAFLDKDSREVDA--TDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVN-VKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGVWGDED 404
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.310e-46 Identity = 182/550 (33.09%), Postives = 244/550 (44.36%), Query Frame = 3
Query: 141 RTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMDLFTRLMDAGADGSAGWRGCHRRTLLGAAARGKNEKMVLALLKAGAKGDIDAVFNGDRASYRTSALYTAAYWGAEAVAKTLLIAGADATLPD-SDGLTPLHVASRGGWQRLVEYLVVAGADPNAKTSGCLIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRNGETXXXXXXXXXXXXXXXXXXXXXARVDSLPRSDKFKVRGAKLGFASCLARAALRGYLGVLEALLRHGSKASGSGSTVDNNATALHFAAAFEGPGDNGNTVRALLNAGADVEAVLTEAANCSTPLHIAASRKITSSGTILALLERGANVHALDDLERAPLHTACY---HSCAGAVELLLRWGADETLEDGLGDTATDLVGGWESDDEGDYFQEGVNNRR---QQRLVDNERIGHMLARAPADRSWRRRGWLVLCRMYPSKVQLSADCRIGNDADMGGH-----ADQEGETTKMVRRRVSPVGGAADGSAGGTENGKETMVDFARLVGRLVGIEAECVFRLVVGYL 1754
+T G EVEIF +V + AT QW WLRAPLEHAAA GN++L RL+ AG DG AGWRGC R+LL AAA G N ++ ALL+AG D++ V + S SALY + EA A+ L++AGAD D +D PL A + G LV L++AGA+PN D+NG A D+ R L S L AA + V++ALL HG + +++ LH+AA F G + LL+AGAD++ V + T LH AA + ++ +LALL RGANVH D LH H+ V++LLR GA E D G DL Q + R + ER +LARAPADR+WRRR WL++ R +K + R +G D + + VRR G + G GG VD LV LV +E++ VFR ++GY+
Sbjct: 5 QTSPSGEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVAS----STGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSF----GHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLA-------------AGADTDIRD---------LDSHSALVFAAQYERIDVMKALLEHGVDVN----VGEDHWNPLHWAAQFNSTG----CITVLLDAGADID-VKCSFLDGRTSLHFAA--ETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLF---------KRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRS-----GRSRGRGGGRA---AVEVDLRGLVSVLVCLESDGVFRTILGYI 496 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig637.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig637.38.1 >prot_P-littoralis_Contig637.38.1 ID=prot_P-littoralis_Contig637.38.1|Name=mRNA_P-littoralis_Contig637.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=548bp MMPTSAGEDRTRLDGFEVEIFNLVKKEATSVQWKEWLRAPLEHAAAKGNMback to top mRNA from alignment at P-littoralis_Contig637:136274..142922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig637.38.1 ID=mRNA_P-littoralis_Contig637.38.1|Name=mRNA_P-littoralis_Contig637.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6649bp|location=Sequence derived from alignment at P-littoralis_Contig637:136274..142922- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig637:136274..142922- >mRNA_P-littoralis_Contig637.38.1 ID=mRNA_P-littoralis_Contig637.38.1|Name=mRNA_P-littoralis_Contig637.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1644bp|location=Sequence derived from alignment at P-littoralis_Contig637:136274..142922- (Pylaiella littoralis U1_48)back to top |