prot_P-littoralis_Contig637.25.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig637.25.3
Unique Nameprot_P-littoralis_Contig637.25.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1280
Homology
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 1240 bits (3209), Expect = 0.000e+0
Identity = 912/1315 (69.35%), Postives = 968/1315 (73.61%), Query Frame = 0
Query:    1 MSQSIDEVLLGTPARGTAGGGDEEGEA--DKFVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLKTVASVARSGPGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGL-DFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEE-NAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVAVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANKGTNAFTEVATPLNPRTPSGAGSSSSTGRRQLG----------------GXXXXXXXXXXXALSTGRSNT-FNPVSSAEPYFRPFNVTPSSVSQYVQAEASRGSPSPLLTHQSPVLNTEELYRAAGWMTPLPKDAANRDSAGXXXXXXXXXVMTDAGGGKS---RLAVLSAKNEEHDTSHRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------IRDEIAREPVLSLANLTGFGGEPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDGSAEEP-GIPKSIAEIYEISNRNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAVAGGGRYAGAXXXXXXXXEATGVLGVGGASAEGPAANYFSGRKRQKGDAG-GRQQGLGLLNDRGRGAGDGRGGGKDDTMEFMEDLGWLSHEQRQAISQQS-SPAXXXXXXXXXXXXXXXXXXXXXXSNIPPAFDPLSGANGVGGSTAAEGGXXXXXDQGDGYSRXXXXXXXXXX-------------GSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGQQPAFRGYDFSQAPPSMGAFQREGSGGARXXXXXXXXXXXXNPFLAAXXXXXXXXXXXXXXXXXXXXXXXXSAQGVYGGGRQQXXXXXXXXHWRPRPDTEKAKSMTYGTKSMQSV 1265
            MSQSIDEVLLGTPARG AGGGDEEGE   DKFVRQLFESLLLGTRASNAIPDG+  EDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHV QEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEA+GKGANQQVALMRHQLKTVAS ARSGP KYASMVSNV+D+PKPQE+F+E++DNSRDTPFVP+LREKPNAVTPLDL+PISTLSTSMGMELEG R  DS  G GL DFHYPHPYEVEIRAFHYMPAQV+AP  S LV PVPL  +E + AP ATFVDTVEALD+MIS ILGD    XXXXXXXXXXXXXXXXXXXX        R   REIAVDLEHHSFR+F GVVCL QLSTREQD+I+DPLKLR EMGRLLP+FSDP IVKV HGSDSD+LWLQRDLGLY+VN+FDTGQAARQLGL SFGLA+LL+ FCDF  DKKHQLSDWRMRPLPA+ML                  ++LERSGGDVAVKAVLDASREICLRR+EKP F ++ WS VLKRQ G G  ++FG+VPRR LSALW WRD IARAEDESYGYVMS YVM R+A+KCPS+RD+LEGCGNPLP LVQQHAED+L IVE A   +   TE  TPLNPRTP GAG +  TG   +G                 XXXXXXXXXXX  S GRS T FNPVSSAEPYFRPFNVTPSSVSQ+V AEASRGSPSPLLTHQSPVLNTEELYRAAGWMTPLPKD + RD AG         VM DAG G +   RLA +SAKNE+HDTS RM          XXXXXXXXXXXXXXXXXXX                         IRDEIAREPVLSLANL GFGGEPG     XXXXXX     XXXXXXXXXXXXX          GIPKSIAEIYEISNR    XXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXX        GGASA GPAANYFSGRKRQKGD G G QQGLGLL DRGRGAGDGRGG  DDTMEFME+LGWLSHEQR+A+ QQ  +PAXXXXXXXX              +N  P  +P SGA G G S+  EG      +Q DGYSR        X                 XXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXX   QQP FRGYDFSQAPPSMGAF R+GSGG  XXXXX       NPFLAA                        +A   YGGGRQQXXXXX   HWRPRPDTEKAKSMTYGT+SMQ V
Sbjct:    1 MSQSIDEVLLGTPARG-AGGGDEEGEGEGDKFVRQLFESLLLGTRASNAIPDGEGQEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVSQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEAAGKGANQQVALMRHQLKTVASAARSGPAKYASMVSNVVDMPKPQEAFQEEIDNSRDTPFVPKLREKPNAVTPLDLAPISTLSTSMGMELEG-RAEDSMSGSGLLDFHYPHPYEVEIRAFHYMPAQVKAPLDSQLVRPVPLVGDEGHKAPAATFVDTVEALDSMISDILGDGAPGXXXXXXXXXXXXXXXXXXXXXXXXPA--REACREIAVDLEHHSFRTFLGVVCLMQLSTREQDYIVDPLKLRGEMGRLLPVFSDPNIVKVFHGSDSDVLWLQRDLGLYLVNMFDTGQAARQLGLPSFGLAHLLEKFCDFVPDKKHQLSDWRMRPLPADMLL-----------------IDLERSGGDVAVKAVLDASREICLRRFEKPAFQEKGWSEVLKRQGGNGVLDDFGDVPRRVLSALWSWRDMIARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEIVENAKDESAGSTEATTPLNPRTPMGAG-TRPTGSSAVGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGRSRTTFNPVSSAEPYFRPFNVTPSSVSQFVLAEASRGSPSPLLTHQSPVLNTEELYRAAGWMTPLPKDPSKRDGAGDTDEDE---VMGDAGKGAATAGRLAAVSAKNEQHDTSQRMAHSLALGSSGXXXXXXXXXXXXXXXXXXXVVAKEAEVAVAAVAAADAGVRTADRIRDEIAREPVLSLANLAGFGGEPGADEGGXXXXXXSGSEVXXXXXXXXXXXXXXXXXXXXXXXGIPKSIAEIYEISNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADA--EGGASATGPAANYFSGRKRQKGDLGAGGQQGLGLLADRGRGAGDGRGGA-DDTMEFMENLGWLSHEQREAMGQQQGTPAXXXXXXXXESG-----------ANTAPQLEPPSGAGGAG-SSVTEG--LGGGEQADGYSRARPRGGGGXRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRGKGATPSKRDXXXXXXXXXXXXXXXXXXXXXXXXAQQPGFRGYDFSQAPPSMGAFHRDGSGGTXXXXXXGF-----NPFLAAGAPGAGPAATGGGRGGVAGGPTGSAA---YGGGRQQXXXXX---HWRPRPDTEKAKSMTYGTQSMQGV 1262          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA)

HSP 1 Score: 358 bits (920), Expect = 1.010e-108
Identity = 195/417 (46.76%), Postives = 252/417 (60.43%), Query Frame = 0
Query:  189 VPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVAVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKA 605
            +PRLR KP+AVTPLDL P           L+GG       G     ++PHPYE E++ F   P Q++ P  + LV P              ++DT   L AM+  + G                                     RE+A+DLEHHS+R+FQG++CL QLSTR  D+IID + LR  +  L P+ +DP ++KVLHG+DSD+LWLQRD G YVVN+FDTG+AAR L L S GLAY L+ FC F ADKKHQL DWR+RPLP  MLKYAQ+DTHYLL+VYDRLR  L   G   A+  VL++SRE+CL+RYEK  F    W  VL+R  G+GA        +  ++ALWDWRD +AR EDES GYVMS Y+M R+A+  P++ D L  C  PLPPLVQQ +++V+A++  A
Sbjct:    1 MPRLRSKPHAVTPLDLVPTP---------LDGGE-----DGGRYPEYFPHPYEAELQEFKPEPWQLEVPKEADLVVP-------------QYIDTEADLRAMLQDLTG------------------------------------CREVAIDLEHHSYRTFQGILCLMQLSTRSADYIIDAIALRRRLHLLAPLLADPRVLKVLHGADSDVLWLQRDAGAYVVNMFDTGRAARTLDLPSRGLAYALKEFCGFEADKKHQLGDWRVRPLPPAMLKYAQADTHYLLHVYDRLRAML---GTPEAIAQVLESSRELCLQRYEKEAFDPEGWRRVLQRIGGEGA-GALDSAQQARMAALWDWRDALAREEDESPGYVMSAYLMLRLARAAPASHDALVRCAAPLPPLVQQRSDEVIALLAAA 350          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A8B8E4N1_CRAVI (exosome component 10-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E4N1_CRAVI)

HSP 1 Score: 348 bits (893), Expect = 3.920e-100
Identity = 217/593 (36.59%), Postives = 325/593 (54.81%), Query Frame = 0
Query:   26 EADKFVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLP-EVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG---KGANQQVALMRHQLKTVASVA----RSG-PGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVA--VKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANK 607
            + + F +Q  +S++  TR SN +P   D  DY Y ++F   R   +  GK+VL +IQ  L +   +G +    E  D  D   F  + D  + +LE V SYLDE++G   K  N  +A    ++KT  + +     SG P      +    +I +PQ  FR+K+DN    PFVPR+ +KPNA+  L+ S    L   +  ++ G    DS      +F YPHPY+ E+  F   P + Q  D     P  PL  E+    P TFV TV  L+ ++  +  +                                      +AVDLEHHS+R+FQG+ CL Q+ST  +DF+ID L LR ++  L  IF++P IVK+ HG+DSDI WLQRDLGLYVVN+FDTGQAAR L  + F LA+L++ +CD T DK++QL+DWR+RPLPAE+ KYA+ DTHYL+Y+Y  ++  +   G D    + +VL  S EIC + Y+KPVF + ++  + ++     + + F     +AL  L+ WRD++ R EDES GYV+  +++ +IA   P  +  +  C NP+PPLV+Q   ++ + + +A +
Sbjct:   18 DVNAFTQQALKSVVQATRVSNDLPAAGD--DYDYYSSFQRVRDILDVEGKRVLNIIQNVLRYHNVKGNMTTSSEATDVDDK--FDVLMDANDHILEKVGSYLDESAGLKKKEENLIIATATPKVKTTPTASWNKKNSGSPSLSQYKLLTARNIQRPQVKFRDKIDNEN-RPFVPRITQKPNALKSLEES--LKLPEDVAADMLG----DS------EFMYPHPYKYELSVFK--PTERQLQDKK---PEKPLPLEDT---PLTFVATVTELETVLRKLRKEE------------------------------------TVAVDLEHHSYRTFQGITCLMQISTATEDFLIDTLALRNDLSPLNEIFTNPAIVKIFHGADSDIDWLQRDLGLYVVNMFDTGQAARVLNHSRFSLAHLMEHYCDVTTDKQYQLADWRIRPLPAELKKYAREDTHYLIYIYHCMKQEILARGNDQKNLLHSVLQRSTEICAKVYKKPVFKEDSYLELYRK-----SKKVFNSRQLQALQRLYQWRDKLGRMEDESTGYVLPNHMLLQIADILPREQQGIFACCNPIPPLVRQFLPEIHSFILEARE 544          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: UPI00148AC28E (LOW QUALITY PROTEIN: exosome component 10 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC28E)

HSP 1 Score: 342 bits (876), Expect = 4.560e-100
Identity = 213/593 (35.92%), Postives = 322/593 (54.30%), Query Frame = 0
Query:   26 EADKFVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGEL-GLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQ-----VALMRHQLKTVASVARSGPGKYASMVSNVM---DIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVA--VKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANK 607
            + + F +Q  +S++  TR SN +P   D  DY Y ++F   R   +  GK+VL +IQ  L +   +G +    E  D  D   F  + D  + +LE V S+LDE++G    ++      A  + +L + AS  +   G  +     ++   +I +PQ  FR+K+DN    PFVPR+ EKPNA        + +L  S+ +  +     D       DF YPHPY+ E+        Q+Q  D+  L P +    E+    P TFV TV  L ++I  +  +                                      +AVDLEHHS+RSFQG+ CL Q+ST  +DF+ID L LR ++  L  IF+ P +VKV HG+DSDI WLQRDLGLYVVN+FDTGQAAR L  + F LA+L++ +CD   DK++QL+DWR+RPLPAE++KYA+ DTHYL Y+Y R++  L   G D    + +VL  S EIC + Y+K VF + ++  + ++     + + F     +AL  L+ WRD++AR EDES GYV+  +++ +IA   P  +  +  C NP+PPLV+Q   ++ + +++A +
Sbjct:   19 DVNAFTQQALKSVVQATRVSNNLPASGD--DYDYYSSFQGVRDILDIEGKRVLNIIQNVLRYHNVKGNMTSSSEATDLDDK--FDVLMDANDHILEKVGSFLDESAGLKKKEENLIIATATPKAKLTSTASWNKKSSGSPSISEYKLLTARNIQRPQVKFRDKIDNEN-RPFVPRITEKPNA--------LKSLEESLKLPDDVNMLEDP------DFVYPHPYKYELSVLKPTDRQLQ--DTEPLKPRL---VEDT---PLTFVSTVIELSSVIDKLRKEH------------------------------------IVAVDLEHHSYRSFQGITCLMQISTATEDFLIDTLALRNDLSPLNEIFTHPAVVKVFHGADSDIDWLQRDLGLYVVNMFDTGQAARVLNHSRFSLAHLMEHYCDIITDKQYQLADWRIRPLPAELMKYAREDTHYLTYIYHRMKQELLARGNDQKNLLLSVLQRSTEICAKVYKKQVFKEDSYLELYRK-----SKKVFNSRQLQALQKLYQWRDKLARQEDESTGYVLPNHMILQIADILPREQQGIFACCNPIPPLVRQFLPEIHSFIQEARE 543          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A131YP86_RHIAP (Exosome complex exonuclease RRP6 n=4 Tax=Rhipicephalus TaxID=426455 RepID=A0A131YP86_RHIAP)

HSP 1 Score: 346 bits (888), Expect = 1.590e-99
Identity = 224/575 (38.96%), Postives = 320/575 (55.65%), Query Frame = 0
Query:   55 EDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG--KGANQQVALMRHQLKTV-ASVARSGPGKYASM-VSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNL-ERSG-GDVAVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANKGTNAFTEVATPLNPRT 623
            ED+ Y ++F  FR      GK VL+++    +H   +G+    ++      E F  +AD+ +T+LE V + LDEA G  K A+  V +     + +  S  +    K A   +    ++ +PQ SF+EKVDNS  TPFVP LR+KP+++ PL + P ST   S G E  G                 HPYE EI  F   P Q++AP    L PP+     + A  P T V+TV+ L  M   +                             ++ T       EIAVDLEHHS+RSFQG  CL Q+S+R QD+I+D L LR E+  L  +F+DP IVKV HG+D D+LWLQRD GLY+V LFDTGQAA+ LGLA F LA+LL+ +C   ADK+ QL+DWR+RPLP EM+ YAQSDTHYLLY+ DR++ +L +RS   D  +++V D S+++ LRRYEKP + ++++  + ++     + + F      AL  L+ WRD  AR EDES GYV+  +++  I++  P  +  +  C NP PPLV+Q+  ++  I+ KA +          PLN R+
Sbjct:   51 EDFEYFSSFASFRQVMLAEGKSVLKLMSSLASHQVGKGKFEGLDL-----EEKFDLLADINDTVLERVGNNLDEADGVKKKADDVVLVTVSANRPIHTSWNKKNLTKAAKFHLLAAKNVTRPQLSFKEKVDNSN-TPFVPILRDKPHSLKPLAILPEST---SDGQESFG-----------------HPYEWEIEHFEPSPTQLKAPSEERLPPPL-----DEA--PCTIVETVDQLKDMCEAL-----------------------------SKET-------EIAVDLEHHSYRSFQGFTCLMQISSRTQDYIVDTLALRHELQMLNEVFADPKIVKVFHGADMDVLWLQRDFGLYLVGLFDTGQAAKVLGLAHFSLAFLLKHYCQIEADKQFQLADWRIRPLPPEMVSYAQSDTHYLLYIMDRMKRDLADRSNENDNLLRSVFDRSKQVALRRYEKPSYHEQSYMELYRK-----SRKTFNSRQLHALRHLYSWRDRTARNEDESTGYVLPNHMILEISEILPREQQGIVACCNPCPPLVRQNLNELHTIILKARE---------VPLNERS 542          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A4D9D6K7_9STRA (HRDC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6K7_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.710e-99
Identity = 270/791 (34.13%), Postives = 387/791 (48.93%), Query Frame = 0
Query:   22 DEEGEADKFVRQLFESLLLGTRASNAIPDGD-----DHEDYAYNA-TFPEFRSRAEGCGKQVLEVIQIFLNHVRQEG-------------ELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLD-----------EASGKGANQQVALMRHQLKTVASVARSGPGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLL-PIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVAVKAVLDASREICLRRYEKPVFLDRAWSGVLK--RQW----GKGAFEE-FGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGC---GNPLPPLVQQHAEDVLAIVEKANKGTNAFTEVATPLNPRTPSGAGSSSSTGRRQLGGXXXXXXXXXXXALSTGRSNTFNPVSSAEP---YFRPFNV-TPSSVSQYVQAEASRGSPSPLLTHQSPVLNTEELYRAAGWMTPLPKDAANRDSAGXXXXXXXXXVMTDAGGGKSRLAVLSAKNEEHDTSHR 767
            +  G    F++ LF+SL+ GTRASNAIP G      +  D+A++A T   F  ++    K+ L +++  + ++ + G             E  +  + D  DP+ F+ +AD++E LL+ V+ ++            EA  +  N+++A    +L+ +A  AR    +Y +M+S  +DIPKPQ +F++++DN R+T F P                              G G    +G   +   PHPYE EIR F Y   Q+Q P    +   +PL  +E++  PA  V + EAL  M+  I                              R    +   + IAVDLE HS RSFQG+VCL Q+STRE+DF++D L L  E+G LL  +F+D  ++K+ HG++SDI WLQRD GLYVVNLFDT  AA+ L +    LAYLLQ +     DK++QL+DWR+RPLP +ML YA+ DTHYLL+++D LR +L R  G   ++ VL+ SR +   RY K  F    +  +L+  R+W    G+G  E     V R  L AL+DWRD +AR EDES GYV    ++ R+AK  P  R  ++ C   G+ LP LV    ED+L +V  A K      + A     R  S  G  SS G    GG           +++T  + T +  +   P   Y  P  V  P   S   +  +S   P P L    PVLNTEELY +AGW            +A          V T AG    R  V++A   E   SHR
Sbjct:    9 ENSGRGGMFLKNLFKSLIQGTRASNAIPAGGGLGNGEASDFAFHAATSSNFADKSLDTSKETLALLKKLVVYISKTGAKDQEESKXXXXXEALIAGLDDVEDPDAFENLADLIEDLLDHVEYFMSTAKRGEGEGIKEAGDQEENKKLASEWARLRRMAGAARQTASRYNTMLSQTLDIPKPQHAFQDEIDNRRETCFQP---------------------------CPHGDGTSVEEGNASEI--PHPYETEIRNFTYSTWQLQVPAEKDMQ--IPLSLQESS--PAGLVASPEALREMVQSI------------------------------REELEKEDEKAIAVDLEAHSLRSFQGLVCLMQISTRERDFLVDTLALWREVGPLLHDLFTDHTVLKIFHGAESDIKWLQRDFGLYVVNLFDTFVAAQALHMPKKSLAYLLQHYVGVVLDKQYQLADWRVRPLPEKMLHYAREDTHYLLHLHDCLRRDLGREQG--RIQEVLEGSRAVSSLRYRKETFDPEGYGRLLQGPRRWTGERGEGRREGGLAPVQRETLKALYDWRDRVAREEDESPGYVCPDKLLLRLAKVRPLTRGGVQECVGSGSALPSLVGARMEDMLQVVGAAGKEEGEEEDKA-----RVFSAGGGESSLGD---GGTQRRVKTRTSESIAT--ATTLHADAEKTPLSDYAFPVYVPAPLEDSLSQERVSSTFHPPPALP-LPPVLNTEELYLSAGW------------TAASDGLQSMTPVSTGAGREGGRAGVVAATGNEGLESHR 711          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A6M2CPX2_RHIMP (Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100 rrp6 ovary overexpressed (Fragment) n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CPX2_RHIMP)

HSP 1 Score: 346 bits (888), Expect = 2.980e-99
Identity = 222/577 (38.47%), Postives = 319/577 (55.29%), Query Frame = 0
Query:   55 EDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLKTVASVARSGPGKYASMVSN-----VMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNL-ERSG-GDVAVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANKGTNAFTEVATPLNPRT 623
            ED+ Y ++F  FR      GK +L+++    NH   +G+    ++      E F  + D+ +T+LE V + LDEA G K     V L+   +     +  S   K AS  +        ++ +PQ +F++KVDNS  TPFVP L++KP+++ PL + P +T             G++S         Y HPYE EI  F   P+Q++AP    L PP+    EE    P T V+TV+ L  M   +                             ++ T       EIAVDLEHHS+RSFQG  CL Q+S+R  D+I+D L LR E+  L  +F+DP IVKV HG+D D+LWLQRD GLY+V LFDTGQAA+ LGLA F LA+LL+ +C   ADK+ QL+DWR+RPLP  M+ YAQSDTHYLLY+ DRL+ +L +RS   D  +++V D S+++ LRRYEKP   ++++  + ++     + + F      AL  L+ WRD +AR EDES GYV+  +++  I++  P  R  +  C NP PPLVQQ+  ++ AI+ KA +          PLN R+
Sbjct:   84 EDFEYFSSFASFRQVMLAEGKSLLKLMSSLANHQVGKGKFEGLDL-----EEKFDLLTDINDTVLERVGNNLDEADGVKKKADDVVLVT--VTANRPIHTSWNKKNASKAAKFHLLAAKNVVRPQINFKKKVDNSN-TPFVPILQDKPHSLKPLAILPENTFD-----------GQES---------YSHPYEWEIEHFEPSPSQLRAPSEERLPPPL----EET---PCTIVETVDQLKDMCEAL-----------------------------SKET-------EIAVDLEHHSYRSFQGFTCLMQISSRTHDYIVDALALRHELQMLNEVFADPKIVKVFHGADMDVLWLQRDFGLYLVGLFDTGQAAKVLGLAHFSLAFLLKHYCQIEADKQFQLADWRIRPLPPVMISYAQSDTHYLLYIMDRLKRDLADRSNENDNLLRSVFDRSKQVALRRYEKPSCHEQSYMELYRK-----SRKTFNSRQLHALRHLYSWRDRVARIEDESTGYVLPNHMILEISEILPRERQGIMACCNPCPPLVQQNLNELHAIILKARE---------VPLNERS 575          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A151ZD76_9MYCE (3'-5' exonuclease n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZD76_9MYCE)

HSP 1 Score: 351 bits (901), Expect = 5.020e-99
Identity = 214/597 (35.85%), Postives = 321/597 (53.77%), Query Frame = 0
Query:   12 TPARGTAGGGDEEGEADKFVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVGDAGDPEV-FQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLKTVASVARSGPGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGG--DVAVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKA 605
            T   G  GG D   + + F + LF+ L+  T+ SN++P     EDYAY  TFPEF+S+    GK++L + Q F+     + ++ L +  D  +    F GI D+V+ +++ VD  +D    +  N  + +      +  +  ++G     +M     +I +PQ  F + +DNS   PF+P+++ KPNA+ PLD   + +  TS G  +     R   Q   +   YPHPYE EI +F Y   Q+Q P    L   +          P T++DTV+ LD ++  +                                        EIA+DLE+HS+RS+QG VCL Q+STR +DFIID L LR +M RL  +F+DP IVKVLHGSDSDI WLQRD G+Y+VN+FDTGQA+R +   S  LA+L++ FC   A+KK+QL+DWR+R +P EM+KYA+ DTHYLLY+YDRLR  L   GG  D  ++ VL  SR++ L RYEK +  D         Q+   +  ++       L  L+ WR+ I+R EDES  Y++   +M  I +K P++  ++      +PP ++ HA  ++  + K+
Sbjct:   11 TSLEGGTGGEDTNSQFEDFQKNLFQKLVSATKISNSLPS---EEDYAYYETFPEFKSKMGTIGKRLLNLTQNFVQSEDPKTKINLTDTNDTEELSYRFNGIVDLVDEMIDRVDKNIDPKYQQSNNSNIYI-----SSTITTGQNGKTNEKNMFYG-NNIVRPQFKFEDPIDNSN-FPFLPKIKVKPNALKPLDPIFLQSYETSFGKIV-----RSKEQETLV---YPHPYEYEIMSFQYTAKQLQ-PCKEQLYKGLDKT-------PYTWIDTVQQLDELVEKLKF------------------------------------VEEIAIDLENHSYRSYQGFVCLMQVSTRTEDFIIDTLVLRSQMNRLNVVFTDPKIVKVLHGSDSDIKWLQRDFGVYIVNMFDTGQASRVMEYPSASLAFLMKYFCSVDANKKYQLADWRIRMIPEEMIKYAREDTHYLLYIYDRLRNELFTKGGSKDTFIQLVLAKSRDLSLLRYEKDLIDD-----YTHIQFAAKSQLQYTPSQLATLKVLYHWRENISREEDESIRYILPNQIMLAIVEKSPTSVQDILNISTTIPPHLKVHAHTLIQDILKS 540          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: A0A1S3K1A2_LINUN (exosome component 10-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K1A2_LINUN)

HSP 1 Score: 345 bits (886), Expect = 5.890e-99
Identity = 214/603 (35.49%), Postives = 327/603 (54.23%), Query Frame = 0
Query:   30 FVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVGDAGDPEV---FQGIADVVETLLEDVDSYLDEASGKGANQQVALM------RHQLKTVASVARSGPGKYASMVSNVMD--IPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFH---YPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDV--AVKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANKGTNAFTEVA 616
            F +Q  +S++   RASN +P   +  DY + ++F  FR      G++VL+++Q  L H   +G L     G +   EV   F  + D  + +LE V S+LDEASG        ++      +H   +    +   P + A+    +    + +PQ  F++KVDNS +T FVP+++ KPNA+  L+ S +  +              D T   G  F    YPHPY+ E+  F     Q+ A +      PVP ++ E+   P T+VDT   L  MI+ +  ++                                     IAVDLEHHS+R++QG+ CL Q+ST + D++ID L LR ++  L  +F+DPGIVKV HG+D D+ WLQRDLG+YVVN+FDTGQA+R L LA + LAYLLQ +C   ADK++QL+DWRMRPLP E++KYA+ DTHYLLY+Y+R++  L   G ++   + +V++ S+ IC + Y+KPVF   +   + ++     + + F      AL  L+ WRD IAR EDES GYV+  +++ +IA+  P     +  C NP+PPL++Q+  ++   +  A     A TE++
Sbjct:   23 FSQQALQSVMGAIRASNELPAAGN--DYDFYSSFGGFRELMNVEGRRVLQLMQDLLKHQNVKGNLS----GGSQSVEVEDKFDVLVDANDQMLERVSSFLDEASGIKKQDSTLVVASVTQKQHINTSWNKKSSESPAQKATSYRLLAARFVQRPQLKFQDKVDNSPNTSFVPKIKHKPNALRSLEESLVPKII-------------DKTDEFGDQFEWLEYPHPYQYELDQFTPKEEQLLAKE------PVPPKSLEDT--PLTYVDTTPTLVEMINRLKEEK------------------------------------LIAVDLEHHSYRTYQGITCLMQISTGDHDYVIDTLTLRGDLYLLNEVFTDPGIVKVFHGADMDVEWLQRDLGVYVVNMFDTGQASRVLNLARYSLAYLLQQYCQVEADKQYQLADWRMRPLPDELIKYAREDTHYLLYIYERMKKELIERGNNLNNLLLSVIERSKHICQKTYQKPVFTQESHLELYRK-----SKKVFNSQQLSALRDLFAWRDGIARLEDESTGYVLPNHMLLQIAEVLPRESQGVIACCNPVPPLLKQYVNEIHQFILAARDRPMAKTEIS 557          
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Match: UPI001457F2D4 (exosome component 10-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F2D4)

HSP 1 Score: 345 bits (886), Expect = 6.290e-99
Identity = 216/597 (36.18%), Postives = 318/597 (53.27%), Query Frame = 0
Query:   26 EADKFVRQLFESLLLGTRASNAIPDGDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGEL--GLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-----------KGANQQVALMRHQLKTVASVARSGPGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVTPLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYMPAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGXXXXXXXXXXXXXXXXXXXXXXEGNRSTGGRAGFREIAVDLEHHSFRSFQGVVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILWLQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDWRMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVA--VKAVLDASREICLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIARAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLAIVEKANK 607
            +  +F ++   ++L  T++SN +P   D  D+ Y ++F  FR   +  GKQ+L ++Q  + H    G+L  G  +V D  D   F  + D  + +LE V S+LDEASG               +Q A      K   S A+S    +     N++   +PQ  F++KVDN    PFVPR++EKPNA+  L+ S          + L      D T+ P   F YPHPY+ E+   H+ P     PD  TL   VP+E       P T V  V  L A+   +   +                                     +AVDLEHHS+R+FQG+ CL Q+STR++DFIID ++LR ++  L  +F+DP IVKV HG+DSD+ WLQRDL LYVVN+FDTGQAAR L LA F LA++L+ +C   ADK++QL+DWR+RPLP E+  YA+ DTHYLLY+YD+L+  L   G +    + +V + S+EIC + Y+K +F +  +  +  +     + + F      AL  L+ WRD+  R EDES GYV+  +++ +I +  P  R  +  C NP+PPL +Q+  +V  I+  A +
Sbjct:   22 DVTEFTQKTLRAVLQATKSSNELPAAGD--DFDYYSSFQGFRDILDIEGKQILHIVQNVMQHQNVRGKLSHGSSDVLDLEDK--FDVLTDANDQILERVGSWLDEASGIKKKDNTLVIASATPKQQASTSWNKKKSTSAAKSPASYHLLSAKNIL---RPQLRFKDKVDNGNQ-PFVPRIKEKPNALKSLEDS----------LRLPDDVTADMTESPS--FLYPHPYQYELD--HWTPR----PD--TLTSAVPIEPRPVDDTPLTMVTKVPQLVALCDKLKSCQA------------------------------------VAVDLEHHSYRTFQGITCLMQISTRDEDFIIDTIELRSDLHLLNSVFTDPNIVKVFHGADSDVEWLQRDLSLYVVNMFDTGQAARVLNLARFSLAHILKQYCGVEADKQYQLADWRIRPLPKELTAYAREDTHYLLYIYDKLKNELIERGNEQKNLLMSVFNRSKEICAKIYKKYIFKEDDFLDLYHK-----SKKVFNSQQLDALKNLYMWRDQTGRREDESLGYVLPNHMLLQIVEILPRERQGVLACCNPIPPLARQYLPEVHGIISDARE 549          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig637.25.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI0.000e+069.35HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CIH7_9STRA1.010e-10846.76Protein in complex with Mn, Zn, and Amp n=1 Tax=Tr... [more]
A0A8B8E4N1_CRAVI3.920e-10036.59exosome component 10-like n=1 Tax=Crassostrea virg... [more]
UPI00148AC28E4.560e-10035.92LOW QUALITY PROTEIN: exosome component 10 n=1 Tax=... [more]
A0A131YP86_RHIAP1.590e-9938.96Exosome complex exonuclease RRP6 n=4 Tax=Rhipiceph... [more]
A0A4D9D6K7_9STRA1.710e-9934.13HRDC domain-containing protein n=2 Tax=Monodopsida... [more]
A0A6M2CPX2_RHIMP2.980e-9938.47Putative exosome 3'-5' exoribonuclease complex sub... [more]
A0A151ZD76_9MYCE5.020e-9935.853'-5' exonuclease n=1 Tax=Tieghemostelium lacteum ... [more]
A0A1S3K1A2_LINUN5.890e-9935.49exosome component 10-like n=1 Tax=Lingula unguis T... [more]
UPI001457F2D46.290e-9936.18exosome component 10-like n=1 Tax=Pecten maximus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002121HRDC domainSMARTSM00341hrdc7coord: 532..612
e-value: 1.8E-13
score: 60.7
IPR002121HRDC domainPFAMPF00570HRDCcoord: 538..602
e-value: 3.3E-13
score: 49.3
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 532..612
score: 16.013203
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 278..482
e-value: 9.8E-37
score: 138.0
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 334..481
e-value: 6.6E-38
score: 130.2
IPR012588Exosome-associated factor Rrp6, N-terminalPFAMPF08066PMC2NTcoord: 41..131
e-value: 5.6E-15
score: 55.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 160..517
e-value: 3.4E-97
score: 327.1
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 527..615
e-value: 3.0E-20
score: 74.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..661
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 905..919
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 888..904
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1254..1268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 834..1279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1014..1038
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1227..1243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..751
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 991..1010
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 22..920
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 277..503
e-value: 1.10898E-100
score: 316.077
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 22..920
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 169..508
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 537..607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig637contigP-littoralis_Contig637:93638..106896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig637.25.3mRNA_P-littoralis_Contig637.25.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig637 90790..107747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig637.25.3 ID=prot_P-littoralis_Contig637.25.3|Name=mRNA_P-littoralis_Contig637.25.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1280bp
MSQSIDEVLLGTPARGTAGGGDEEGEADKFVRQLFESLLLGTRASNAIPD
GDDHEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVRQEGELGLPEVG
DAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLKTVAS
VARSGPGKYASMVSNVMDIPKPQESFREKVDNSRDTPFVPRLREKPNAVT
PLDLSPISTLSTSMGMELEGGRGRDSTQGPGLDFHYPHPYEVEIRAFHYM
PAQVQAPDSSTLVPPVPLEAEENAAPPATFVDTVEALDAMISHILGDRGG
GGGGGGGDAAGGGGSSSGSDDEGNRSTGGRAGFREIAVDLEHHSFRSFQG
VVCLTQLSTREQDFIIDPLKLREEMGRLLPIFSDPGIVKVLHGSDSDILW
LQRDLGLYVVNLFDTGQAARQLGLASFGLAYLLQSFCDFTADKKHQLSDW
RMRPLPAEMLKYAQSDTHYLLYVYDRLRVNLERSGGDVAVKAVLDASREI
CLRRYEKPVFLDRAWSGVLKRQWGKGAFEEFGEVPRRALSALWDWRDEIA
RAEDESYGYVMSGYVMTRIAKKCPSNRDELEGCGNPLPPLVQQHAEDVLA
IVEKANKGTNAFTEVATPLNPRTPSGAGSSSSTGRRQLGGTGDGGGGGGG
GALSTGRSNTFNPVSSAEPYFRPFNVTPSSVSQYVQAEASRGSPSPLLTH
QSPVLNTEELYRAAGWMTPLPKDAANRDSAGGGDNSDDDEVMTDAGGGKS
RLAVLSAKNEEHDTSHRMAHSLALGSSGGGSGAAAAAATAAGTAAAEAEA
AAVSVGVRTADRIRDEIAREPVLSLANLTGFGGEPGGGGGGAAGGSGSED
GSGSSGEAAAGADPAEEDGSAEEPGIPKSIAEIYEISNRNRARNKEKKKL
RETAPEASTSPSRTQRRPQEQPLAVAGGGRYAGAAATAAASAEATGVLGV
GGASAEGPAANYFSGRKRQKGDAGGRQQGLGLLNDRGRGAGDGRGGGKDD
TMEFMEDLGWLSHEQRQAISQQSSPAGGPASSSNATGGPGGGGGGDGGSN
IPPAFDPLSGANGVGGSTAAEGGGGGGGDQGDGYSRARARGGGGGGGSGG
GSGGARGQGHPAGRAGGGGGGGRGRAAVPNARDRDVGRGGADGGGGGRGG
QQPAFRGYDFSQAPPSMGAFQREGSGGARGGGGGGGGGGGFNPFLAAGGA
PGAGPVGGAGGRGGGAGGPGGSAQGVYGGGRQQQQQQQQQQHWRPRPDTE
KAKSMTYGTKSMQSVGQGRGGGNGPRRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR0025623'-5'_exonuclease_dom
IPR012588Exosome-assoc_fac_Rrp6_N
IPR036397RNaseH_sf
IPR044876HRDC_dom_sf
IPR045092Rrp6-like
IPR012337RNaseH-like_sf
IPR010997HRDC-like_sf