prot_P-littoralis_Contig637.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig637.4.1
Unique Nameprot_P-littoralis_Contig637.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length136
Homology
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A6H5KWM4_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWM4_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 2.570e-88
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 0
Query:    1 MPKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADALEPPAS 134
            M KEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDI+EVNLPKDHVANTHRGFGF+EFE+EEDAKAA+DNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPAD+LEP  S
Sbjct:    1 MTKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFELEEDAKAAIDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADSLEPTVS 134          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A835Z2R3_9STRA (Peptidyl-prolyl cis-trans isomerase E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.660e-54
Identity = 81/129 (62.79%), Postives = 106/129 (82.17%), Query Frame = 0
Query:    7 PKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADALEPPASS 135
            P+  +YVGGLEE VNEE+LHAAF+PFGD++EV +P++  + T+RGFGF+E+E EEDA AA++NMDGAEL G+VLRVN AKP+KHKLGA  AVWSAD+W+KN + EGD+T  +  D++   DALEP A+S
Sbjct:    7 PRCTLYVGGLEENVNEELLHAAFIPFGDLVEVQIPREWKSGTNRGFGFVEYEAEEDASAAMENMDGAELAGRVLRVNRAKPLKHKLGAARAVWSADEWFKN-MAEGDETINMTADDMPQPDALEPVAAS 134          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: I2CRH6_NANGC (RRM domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRH6_NANGC)

HSP 1 Score: 155 bits (393), Expect = 1.980e-46
Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    2 PKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELE 124
            PK    K  VYVGGL+EQ  EE+LHAAF+PFGDI+EVN+PKD   NT RGFGF+ FE  EDA AA+DNM+GAEL G+VL+ N A+PM+HKLGA+  VWS D+W+K+ L E  D     GD+LE
Sbjct:    5 PKPKADKSIVYVGGLDEQCTEEMLHAAFIPFGDIVEVNIPKDFKENTTRGFGFVHFESAEDAAAAIDNMEGAELLGRVLKCNVARPMQHKLGANKPVWSTDEWFKSQLAEDKDL----GDQLE 123          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A7S2V6A5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6A5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.150e-45
Identity = 69/124 (55.65%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    8 KRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADALEP 131
            K+ VYVGGL+E+V EE+LHAAF+PFGDI+EVN+P+D   + +RGFGF++FE E+DA AA++NMDGAEL+G+VLR N A+P+KH+LGA   VWSA+DW+++ + +G+       + ++PAD+L P
Sbjct:   13 KKVVYVGGLDEKVVEEVLHAAFIPFGDIVEVNIPRDFQKDLNRGFGFVDFEDEKDASAAIENMDGAELFGRVLRCNLARPIKHRLGASKPVWSAEDWFQSNVKDGE----ADEENIDPADSLIP 132          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A7S2H1G4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1G4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.310e-44
Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    8 KRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGD--ELEPADA 128
            KR++YVGGLEE+  EE+LHAAF+PFG+++EV +PKD   N +RGFGF+EF+ + DA  A+DNMDG+EL G+VLRVN AKP+ HKLGA  AVWS+D+W+K  L E  D A    D   L P DA
Sbjct:    8 KRSLYVGGLEEEATEELLHAAFIPFGNVVEVQIPKDFKDNKNRGFGFVEFDNDADAAEAMDNMDGSELLGRVLRVNIAKPITHKLGASKAVWSSDEWFKQNLKEDQDLADAQDDTDSLVPMDA 130          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A7S2C0W9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0W9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.360e-44
Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    8 KRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADALEP 131
            KR +YVGGLEEQV+EE+LHAAF+PFG+I EV +PKD   NT+RGFGFIE+  +EDA  A+DNMDGAEL G+VLRVN AKPMK KLGA   VWS ++W +N+L E     +   D  E AD L P
Sbjct:   15 KRTLYVGGLEEQVDEELLHAAFIPFGNINEVQIPKDFKENTNRGFGFIEYTNDEDAAEAMDNMDGAELLGRVLRVNVAKPMKAKLGASKPVWSTEEWLQNSLKED----QALADAQEDADDLTP 134          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A5J4Y598_9CHLO (Peptidyl-prolyl cis-trans isomerase E-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y598_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 1.020e-38
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0
Query:    7 PKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLG----AHTAVWS-ADDWYKNTLVE 111
            PK  +YVGGLEE VNE ILH+AF+PFGDI +VN+P DH    HRGFGFIE+E ++DA  A+DNM  AELYG+VLR N A+PMK K G    +H AVW+ ADDWY+    E
Sbjct:   20 PKTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDHATGKHRGFGFIEYEAKDDAADAIDNMHNAELYGRVLRTNYAQPMKIKGGDKGFSHQAVWADADDWYERAEAE 129          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A812XSP9_SYMMI (PPIE protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSP9_SYMMI)

HSP 1 Score: 134 bits (338), Expect = 2.250e-38
Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 0
Query:   11 VYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGD 113
            VYVGGL+  VNEE LHAAF+PFGDI EVN+PKD   N HRGFGF++FE  EDA AA++NM+GAEL+GKVL+ N AKPM  KL    AVW+A++W  N+L   D
Sbjct:    1 VYVGGLDSGVNEETLHAAFIPFGDIREVNIPKDFAENKHRGFGFVDFEDAEDAAAAIENMNGAELFGKVLKCNMAKPMT-KLQPGQAVWTAEEWLSNSLKTDD 102          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A0C9RSU5_AMBAM (Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9RSU5_AMBAM)

HSP 1 Score: 135 bits (339), Expect = 6.920e-38
Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 0
Query:    8 KRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKN------TLVEGDDTAKLAGDELEPADALE 130
            KR VYVGGL E+V+E++LHAAF+PFGD+I+V +P D+    HRGF F+EFE  EDA AA+DNM+ +EL+G+ +RVN AKPMK K G+  AVWS D W +          E D+ +K  G+    +DA E
Sbjct:    2 KRMVYVGGLAEEVDEKVLHAAFIPFGDVIDVQIPLDYETQKHRGFAFVEFEQAEDAAAAIDNMNDSELFGRTIRVNIAKPMKIKEGSTRAVWSEDSWLRQHAGETLNTKEDDEDSKEGGEADAESDAKE 130          
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Match: A0A1S3HFS1_LINUN (Peptidyl-prolyl cis-trans isomerase E n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HFS1_LINUN)

HSP 1 Score: 138 bits (347), Expect = 2.030e-37
Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    5 AQPKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHRGFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKN----TLVEGDDTAKLAGDELEPADALEPPAS 134
            A  KR VYVGGL E+V+E+ILHAAF+PFGDI+++N+P D+    HRGF F+EFE+ EDA AA+DNM+ +EL+G+ +R N AKPMK K GA  AVWS D W +     TL +GD   +   +   PA+  E  A+
Sbjct:    2 ASNKRIVYVGGLAEEVDEKILHAAFIPFGDIVDINIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNDSELFGRTVRTNLAKPMKIKEGASRAVWSEDSWLQEHAGETLSKGDKENEDETNNKRPAEEAEDSAA 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig637.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWM4_9PHAE2.570e-8894.03RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z2R3_9STRA3.660e-5462.79Peptidyl-prolyl cis-trans isomerase E n=1 Tax=Trib... [more]
I2CRH6_NANGC1.980e-4660.98RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S2V6A5_9STRA3.150e-4555.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H1G4_9STRA1.310e-4458.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C0W9_9STRA4.360e-4461.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5J4Y598_9CHLO1.020e-3860.91Peptidyl-prolyl cis-trans isomerase E-like n=1 Tax... [more]
A0A812XSP9_SYMMI2.250e-3863.11PPIE protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A0C9RSU5_AMBAM6.920e-3851.16Putative cyclophilin-type peptidyl-prolyl cis-tran... [more]
A0A1S3HFS1_LINUN2.030e-3751.49Peptidyl-prolyl cis-trans isomerase E n=2 Tax=Ling... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 10..83
e-value: 1.3E-23
score: 94.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 11..81
e-value: 4.4E-20
score: 71.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 9..87
score: 19.825935
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..99
e-value: 9.0E-27
score: 95.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..135
NoneNo IPR availablePANTHERPTHR48037ATPASE E1coord: 4..111
IPR034168Peptidyl-prolyl cis-trans isomerase E, RNA recognition motifCDDcd12347RRM_PPIEcoord: 11..83
e-value: 3.50323E-41
score: 129.65
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig637contigP-littoralis_Contig637:13294..16975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig637.4.1mRNA_P-littoralis_Contig637.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig637 12265..17042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig637.4.1 ID=prot_P-littoralis_Contig637.4.1|Name=mRNA_P-littoralis_Contig637.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=136bp
MPKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIIEVNLPKDHVANTHR
GFGFIEFEMEEDAKAAVDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWS
ADDWYKNTLVEGDDTAKLAGDELEPADALEPPASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034168PPIE_RRM
IPR035979RBD_domain_sf