mRNA_P-littoralis_Contig636.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig636.38.1
Unique NamemRNA_P-littoralis_Contig636.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.410e-34
Identity = 99/315 (31.43%), Postives = 158/315 (50.16%), Query Frame = 3 
Query: 2889 MRWIHLPLLVLAFCPSSMPTAAAVEGTQDATITGVQTEKELLPRSAGRGSRACEQHPGVLDMRLQCVMPGENSRSVYTPIGGCRMHLTIGDGQCGYRAVGGALIKSKGYARSKTVEDLKRLTQEAAIRHIMQGATPAXXXXXXXXXXTEEFGNRLISRDQLDRARSLRLSQIRDLWGELVDEVDPSERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 3833
            MR   L LL + F  SSM T A    +    +  V   +EL P  +  G R  E   G   + ++C         V TP+ G  +H   GDG+CG+ A+   L    G AR+   + ++      A+ H++ GA               E    ++S+DQL RA S+++  +    G++   +   ++T  W     ++  E+ W+D+TW+  LA   GVNI++WEPS     ++ YS   + G+FL++K+D+MDEEGDHW+HLLY   + P+ AR     +Q+  +  NHF  + LG DAV  F+  ++S + Q
Sbjct:    1 MRPFFLVLLAI-FRTSSMNTPAVDSDSDHQVVFRVDKRQELAPPPSALGRRVQEHIGGPQALSMKCSTTLIQGGRVITPLAGAGVHTVEGDGKCGWNALRAGLQACLGRARTPNEQQMRAAVARRAMEHVV-GAPDVP-----------EDSTAVLSKDQLGRALSVKVPHVL---GDVEHGMAAEDKTVRWFCDLARQSAEK-WVDITWMSFLASEYGVNIMVWEPSAKHGTVQAYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQ 291
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BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5KFV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.740e-19
Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 3 
Query: 3495 EDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSS 3821
            E W+DVTW+  LA   GVNI++WEPS     ++ YS   + G+FL++K+D+MDEEGDHW+HLLY   + P+ AR     +Q+  +  NHF  + LG DAV  F+  ++S
Sbjct:  325 EKWIDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVAS 426
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BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.800e-19
Identity = 57/161 (35.40%), Postives = 94/161 (58.39%), Query Frame = 3 
Query: 3351 LISRDQLDRARSLRLSQIRDLWGELVDEVDPSERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 3833
            ++S+ QL RA S+++  +    G++   +   ++T  W      +  E+ W+DVTW+  LA   GVNI++WEPS     ++ Y    + G+FL++K+D+MDEEGDHW+HLLY   + P+ AR     +Q+  +  NHF  + LG DA   F+  ++S + Q
Sbjct:   53 VLSKRQLGRALSVKVPHVL---GDVEHGMAAEDKTVRWFCDLAWQSAEK-WVDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYLGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAAASFVDVVASAKLQ 202
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BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5KNV0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV0_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.880e-16
Identity = 94/307 (30.62%), Postives = 144/307 (46.91%), Query Frame = 3 
Query: 3519 LGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQQ---------------QEGGT---------------GPL-RGARKRTGTTQSRDKQ----KRKQPDQPPKGNGGTSKKPGLETPQPLDKPAKIEKG-------------------VKKRRARK----GGDDK--VVKEKDVCYDSDGNIGGGD--DFESAGAFACLTINPRKLTSDIGKIPEIAYKRAFLKSSQRKALGLKV 4253
            + LLA   GVNI+LWEPS     ++ YS   + G+ L++K+D+MDEEGDHW+HLLY   + P+ AR     +Q+  +  NHF  + LG DAV  F+  ++S + Q                + GG+               GPL RG+     ++ +  +Q    K K+    PK  G T  +PGL   +   +  +   G                   V K+++R     GG  +    K            GGGD    ++ GAFA ++ N +KL + + KIPE  YKRAF  +++R+ALG+K+
Sbjct:    1 MSLLASEYGVNIILWEPSAKHGTVQAYSENNTAGMLLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGGEEEDHPEFSMGPLPRGSNSSRSSSGTEGRQAGARKTKKGKVGPKVVGST--RPGLRQGRSARRWLRRGSGXXXXXXXXXXXXXXXXMGEVPKKKSRLHRLVGGTPRRPTAKTTMPTMIPTAASGGGDVDHKQTPGAFATMSQNQKKLVTAMKKIPERGYKRAFWLTNKRRALGMKL 298
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BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Match: A0A6H5K2B4_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.920e-14
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 3 
Query: 3447 ERTADWVDKTVKKRVEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRI--YSAGGSKGLFLYDKKDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSDAVTDFITAMSSRQQQ 3833
            E+T  W      + V+  W+D+TW+  LA   GVNI     +G     RI  YS   + G+FL++K+D+MDEEGDHW+HLLY   + P+ AR     +Q+  +  NHF  + LG DAV  F+  ++S + Q
Sbjct:    5 EKTVRWFCDLAWQSVK--WVDITWMSFLASEYGVNI-----TGCPSWSRIQTYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR-----NQNHNL--NHFDRLQLGHDAVASFVEVVASAKLQ 121
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig636.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JW40_9PHAE1.410e-3431.43HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5KFV5_9PHAE1.740e-1944.95Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JJP9_9PHAE1.800e-1935.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNV0_9PHAE1.880e-1630.62DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K2B4_9PHAE6.920e-1438.93DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig636contigP-littoralis_Contig636:148189..154139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size4394
Hectar predicted targeting categorysignal peptide
Exons3
Cds size1506
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791325.9281163-UTR-P-littoralis_Contig636:148188..1510761680791325.9281163-UTR-P-littoralis_Contig636:148188..151076Pylaiella littoralis U1_48UTRP-littoralis_Contig636 148189..151076 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791325.9388442-CDS-P-littoralis_Contig636:151076..1524381680791325.9388442-CDS-P-littoralis_Contig636:151076..152438Pylaiella littoralis U1_48CDSP-littoralis_Contig636 151077..152438 +
1680791325.952296-CDS-P-littoralis_Contig636:153640..1536691680791325.952296-CDS-P-littoralis_Contig636:153640..153669Pylaiella littoralis U1_48CDSP-littoralis_Contig636 153641..153669 +
1680791325.9619908-CDS-P-littoralis_Contig636:154024..1541391680791325.9619908-CDS-P-littoralis_Contig636:154024..154139Pylaiella littoralis U1_48CDSP-littoralis_Contig636 154025..154139 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig636.38.1prot_P-littoralis_Contig636.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig636 151077..154139 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig636.38.1

>prot_P-littoralis_Contig636.38.1 ID=prot_P-littoralis_Contig636.38.1|Name=mRNA_P-littoralis_Contig636.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=502bp
MRWIHLPLLVLAFCPSSMPTAAAVEGTQDATITGVQTEKELLPRSAGRGS
RACEQHPGVLDMRLQCVMPGENSRSVYTPIGGCRMHLTIGDGQCGYRAVG
GALIKSKGYARSKTVEDLKRLTQEAAIRHIMQGATPAAAAAAAAPPPTEE
FGNRLISRDQLDRARSLRLSQIRDLWGELVDEVDPSERTADWVDKTVKKR
VEEDWLDVTWLGLLADNLGVNIVLWEPSGIDRLLRIYSAGGSKGLFLYDK
KDRMDEEGDHWLHLLYHTDSRPFTARAEITLSQDDPVAHNHFTWIDLGSD
AVTDFITAMSSRQQQQQEGGTGPLRGARKRTGTTQSRDKQKRKQPDQPPK
GNGGTSKKPGLETPQPLDKPAKIEKGVKKRRARKGGDDKVVKEKDVCYDS
DGNIGGGDDFESAGAFACLTINPRKLTSDIGKIPEIAYKRAFLKSSQRKA
LGLKVTERQDTHSPSHRCRRRIRLDAKSSSEEGGLPCGRRGRHQSSDRRY
G*
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mRNA from alignment at P-littoralis_Contig636:148189..154139+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig636.38.1 ID=mRNA_P-littoralis_Contig636.38.1|Name=mRNA_P-littoralis_Contig636.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5951bp|location=Sequence derived from alignment at P-littoralis_Contig636:148189..154139+ (Pylaiella littoralis U1_48)
GCGGGGGTGAAAAGCCTAGAACCCATCACATGTCTCACAGAAAAAAACGA
ATACGAAATGGGACTTTGTTATTGCAAGGAACAAAACTATGTTTAACATG
GACGATGACTAGCACCAGGTCGCACACACTAATTTTTTTTGTGTTTGTCG
CAGTCGATGAGAAAATATACAAAAAGAGATTGAAGGGGGATCACCCACAA
GGAGGGCACGTAGTGCACGCATGACGGAAAACCCAAGTCGATCGGTGGAG
CAAATAAGATACAGGAGGGCGGAATAAAGCGCAGACAGGCGATGAGGTTT
CCTAAGCAAGGCACCTGTAAAAAGGGAGATGGGGAGGCCAAGAGGATGAA
AGGTAGAAAACAAGAAGACGCAGGAGAAGAAAAGCAGGTCGAGGGAGGCG
TAACGCATAGAGAAAGAAATGTGGTCGCTGACGAACTCTGCCGTACGGCA
TTGCGAATGGAAAGTGGTAAACGATTGTCGAAATGAATTGTACGCTCCGC
GTCCGCTTTCGACAGCCGCGGCTCGGCGACCCCGTTGAGTCTAAAGCCCG
GACGGGTCACGTTTTGTTCCCCGTGCTCGGCCCAGAGTCTCCTCCCGCTA
TGAAAAAAAAAAACTATAGACGTGGCCCAGCCGGGCCTCGAGCGTGCGAT
GAACTTGGGGCAACAATATTGTATGGATATCTATGGTGGTGGTGGCGTCC
TCACAGGATATACCCCCCCCACACAAAAATCCCATTCATTCGTCAGAAAA
CAGTCGTCCTGAACAAAGCGAAGGCATCCAAAAATATGCAACACAAGCAA
TAACGACTGACAAGATAGCGGGGGCTGGGGGACTCAAACAAGTGCACTTC
GCACGGAGTGTATTGTATTATATACGGTACCGCTATTTACCTCACCGGTG
GGGTATTTTCTTATTTACTCTCCACGGGAATCGCACCATATGACTCAGTG
GGTCACAGGACACACATAAATGTTTTGACGCCATGCAGGGCTATCGTGAA
GGACCTTCGCCGTATATCGTATAGCCCGGATTGTCCAGTCTAGGTGCTAC
CACAGTCGGTAGATATCCTGATAACACCCAGGCAGTGGGAAAAGCGAGGT
TATTCCCCCGAAGACTCGGTGGGTCACAGGATATACATGAATGTTTTGGC
GCCATGCAGGGCTATCGCAGGACCTATCGTGAAGCCCAGACGGTCCAGTC
TAGGTGCTACCACAGCAGGTAGATATCCAGATAATATCCAGGCGGTGGGA
AGAGCGAGGCTTTTTTCCCCATCGCGGTGGGGGGATCACGCTGTACCCCA
CCGGCCGTACCGGTACCGTTATTGTTATTGTTTTTGTATGTATGAAGATG
CTTCGAGTTATAATACATATCTTGTAAATCCGTCGCCCCGGTGGTTCAGT
TGGTTACCCATGCAACCTTCTGACATTCACGCGTGAGTTCGAATCCCAGT
GCAGTAACACGATCTTGGTTTTTTTCTCACCTTGCGCGTGTCGGTGGAAA
GCGATCAATTCGTGAGTAAACAAAATTCGATCGTACCATCGACGAGGGAA
AGTGATTGCTGTCCCCTTTCTCGCGATAAAAGCTCAACCAAAAGGCAAGC
ACCGCAGAGGGAAGTGGAGCAAAAAAAAAAAGCACTCCTGTGTTGACTTC
CCCCTGTGTGACCCCGGTTGGAGCGTTCTACCTACCCGAAAGGTGTAGAG
TGGCGTCCAATTAAAGGGATGGCAACACACACACACACACAACAGATGCG
AATGCTCTAATTTCGCTTGTTTGTACCATTGTAGTTTTTTTGGGAAGCCG
ATCCGAAGGAGAGAAGGAGGTAAGTGGTGTTGAAGCTGGTGGCGTAGCGG
TAGGAGTAACACGAAATGTGATGCAAGTTCGTAGGTTCGACCCTGTCCTT
CGATGATCGGAATTGCCGATGATAAAGGGGTGGATCCGGGAAGTGTACAA
GGGAGGAAAGGAAAACGCCTTGTTGAGTACCAGAGGGGAACGCTATTTCA
CAATTTTTATTTTGCGGGGGTGCTTTTTACCGCCGAAAAGGAAGTCCTAT
CGCACAACCTAGGAACCTCGTGACGGGGACATTGCACAACCTGGGTACCT
TGTTACGGGAGCATTACACAACCAGGGCATTGTACCGTTTACATGTTTCG
GTTGCGCCGACGTTGGCCAAATCACCCAGACAAGGTGCTCATTTGGCCAC
CTGTGATAACCGACATTTTAGGGTTGGTTGTTGATTTGACTGATGACTGT
GATCGTCAAATGAATGAACAATCATATCGAATAATCACGTCTAGCTATTG
ATTCACGTTATCTCCAGTGTCCTCAAGGAAAATAACTTTGATACTCAGTT
TAGGAACAACGCAACAGACGTGGTTGTTTGTATTCTTCGCGTTAGTTGAT
ATTCTATTCTCTAGATCTTGAGGGCGAACAAATTGTTGCTGTGTGTTTGC
AGAAAAATTAATAAATGCAAGTAAGGCGGTTTCTTGTAGGGCCGGATTTT
TTTTTCTTTTTTTGATAGAATCCGAACGAACTTTTCCGGCCAACGGTTGC
CGATCCGCTGTTCTTATAGGTAAATGGGTGTTCGGGTTTTCGGTGATCCT
CTTTTAACCCTTTCGTGACTTGGGTAAGGAAGTAGTGATGGTAGGAGTGA
GGTTACTCTTCCTAGCTATACTATTTTTATCGAGAATTGCTCTGAAAAGA
AGGTCTCATCAGCACGAATGGATCGTCTTTTCACCCGCCGGGCAATGACC
GGGGCTGGTGCGCCGAGAGCCCCTGCTTGAAAAAACAGCATAGCCGGAGT
TGCACAACAGCAGCGCGCCGCATGCCCCACAGACCACACACTCACGCGCA
CGCAAAGGCTTGCCGTACACGCGAGCAAGTCAAAGCCCATGCGGTGGATT
CATTTGCCGCTGCTGGTGCTGGCTTTCTGCCCAAGCTCCATGCCCACTGC
TGCAGCAGTCGAAGGCACGCAGGATGCCACAATCACTGGCGTCCAGACAG
AGAAAGAACTGCTTCCACGAAGTGCTGGGCGTGGGAGCAGGGCGTGTGAA
CAGCATCCCGGCGTCCTTGACATGCGTCTCCAATGCGTCATGCCAGGCGA
GAATTCCCGCTCAGTGTATACCCCAATAGGTGGGTGTAGGATGCACCTTA
CCATCGGCGATGGCCAGTGTGGCTACCGCGCTGTGGGTGGGGCATTGATC
AAAAGTAAAGGATATGCACGATCAAAAACAGTTGAAGACTTGAAGCGTTT
GACGCAAGAAGCTGCAATCCGCCACATCATGCAGGGTGCGACCCCAGCAG
CAGCAGCAGCAGCAGCAGCACCTCCACCAACAGAAGAGTTTGGCAACCGC
CTTATCTCGAGAGATCAACTAGATAGGGCGCGCTCTCTACGCTTGTCTCA
GATACGTGATTTGTGGGGGGAACTAGTAGACGAGGTCGACCCAAGCGAGA
GGACGGCCGATTGGGTGGATAAAACTGTCAAGAAGCGAGTTGAGGAGGAC
TGGCTGGATGTGACGTGGCTTGGGCTGCTTGCGGATAATCTCGGTGTCAA
TATCGTGTTGTGGGAACCATCTGGGATCGACCGTCTGCTCCGGATTTACT
CTGCTGGTGGATCGAAAGGATTGTTCTTGTACGACAAGAAAGACCGCATG
GATGAAGAGGGGGACCACTGGCTGCACCTACTGTATCACACAGATTCAAG
GCCATTTACAGCTCGGGCAGAGATCACGTTGTCACAGGACGACCCGGTTG
CGCATAACCATTTCACCTGGATCGACTTGGGTTCGGACGCAGTTACGGAC
TTCATAACCGCGATGTCATCGCGGCAGCAGCAGCAGCAGGAGGGAGGTAC
CGGGCCATTGCGGGGTGCCCGCAAGAGGACGGGCACAACACAGAGTAGAG
ATAAGCAGAAGAGGAAGCAGCCCGACCAACCGCCAAAAGGAAACGGTGGC
ACATCGAAGAAGCCTGGGCTTGAAACGCCGCAGCCTCTGGACAAGCCTGC
CAAGATCGAAAAGGGCGTCAAGAAGCGCAGGGCCAGGAAAGGTGGGGACG
ACAAGGTGGTGAAGGAGAAGGATGTCTGCTATGATTCCGACGGTAACATC
GGCGGGGGAGACGACTTCGAATCGGCTGGGGCGTTTGCGTGTTTGACGAT
CAACCCAAGGAAACTGACCTCCGACATCGGCAAGATACCCGAGATTGCAT
ACAAGCGGGCGTTCCTGAAAAGCAGCCAGCGGAAAGCTTTGGGCTTGAAG
GTATGTCGGAGGAATGACATAGAGTGTTGTTGTTTGCGCCTCGTGAATAG
GGTTAGGGTTATTATTGAGTACCAGTATATGATAGTCGGAACGTAAATCC
TTTGTGAACGCATGCCAGCAGCAGCAGCAGCAGTATAATAGCGGTAGTAT
CACATGCCCCACAGCACACCACCCCGATCCAGCAGCAGTAGTAGTGATGG
AGGTGCACACAACAGCGAAGCAGCACGGCAGCAATAGCACCGCCACCCAG
TTACACGCAGACCAACAGTCAGCAGAGGGGGTGTCTCTTGGGTGTGTCGA
CAACAACAGGGCTGCTGCTGCTGCACATACCACAGTATCTCAGAATGTAT
GTACGATGGCATATAAAGTCTGCCAGACACACTACCGCTGGAGAACAGCT
CTCGGGGCTTTTTCACCGGCAATTGCAACAAGTTGTTTTTCTGTGCGTCC
ATGCTAATATATGTTGTTATTTTTCTCGGCCAAATGTACCTGGCAGACAT
GTGTCGGTTCACACACACAAAAACAACGTAATACACACAGCACCAAGTTG
TGGTGATGGGCATCGCGTGGACTCTCGTAAAAACGATTGAATCGATTGAC
CACCTCTCTGACGGCCAGCCGGAATGAAGGTCGAAAGTGGACGAGTTCGT
CGAAATTCCTGAAACTCTCAGCGGAAATGCTGTACATCTATCGTTTTCTA
TACTTGAAGTATAGAGGAGTACCAGTATAATTTTGACATTCAAAAGTTTT
TTTTCGTGGTTAAAATGTGCATCGTCAGAGGAAGTCTTTGTGTTCGACAC
ACTCCCGGGCCGCCTTACTGTAAAATAAAATCGAAAAATACGTAATTCCC
ACAGCGCAAAATACGATACAAAGTAACGGGGTTTTTCTGTACACATTAAG
ATCCACCTTGTTTTCAACAGCAATGGGCCAATTGAGATGTTGTTGGCACC
GTTGTCTTTGAAACAATTCTGTATTTCACGGAAGATACGAAACATTTGTG
GTGTACTTACTTGTACACAGGAAACATCCTGTTCGCAAGTAGGAGCCATC
AAGTGCTCGTAAGCCCCCACACCAAGCCCCCCCCTTCACCATTCACTTTT
CCATCTTTCCCCATCGGCCTCTTCCCCTCTCACAAGTTCGTTCGTCTTCC
TCCCCTCTGGTGTTCCTGGCGCCGACGTTACACGACTTTACCCTGCGCCC
AGGTGACTGAACGTCAAGACACCCACTCGCCGTAAGTCCCGCGCGTGCGC
GCCGACTTAGATCGTCCGGTAGGCCATGCCACAGGTTGTACTTCGTTTTT
AGTTGCTTCTGTTTACTGTGTAGATCAACAAACAAACGTATTTTGCGTAC
GCCATTCGAGGTGAGCAAGACAGCAGCCTTGCCTCGTCCTCGGGCTCACC
CACGCCGCCGGCGTTGATATGTCCGTGGCGCGCGAGGTGTATAAAGGGGT
GAGCGCGTGCGGTCACATTCGGTAGCAATTAATTACCGAATAGCTTTTGA
AAACGTGCATCCTCCCGCAAAGCAACATCCCACGACACGTTTCCAATGCA
ATCGACCTGCCGCTACCCGGTGCCACTTAACGCCAGGTCTCATCGCTGCC
GAAGACGGATACGCCTTGACGCGAAGTCATCAAGCGAGGAGGGAGGGCTT
CCTTGTGGACGCCGTGGACGACATCAATCATCGGACCGACGGTATGGATA
A
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Coding sequence (CDS) from alignment at P-littoralis_Contig636:148189..154139+

>mRNA_P-littoralis_Contig636.38.1 ID=mRNA_P-littoralis_Contig636.38.1|Name=mRNA_P-littoralis_Contig636.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1506bp|location=Sequence derived from alignment at P-littoralis_Contig636:148189..154139+ (Pylaiella littoralis U1_48)
ATGCGGTGGATTCATTTGCCGCTGCTGGTGCTGGCTTTCTGCCCAAGCTC
CATGCCCACTGCTGCAGCAGTCGAAGGCACGCAGGATGCCACAATCACTG
GCGTCCAGACAGAGAAAGAACTGCTTCCACGAAGTGCTGGGCGTGGGAGC
AGGGCGTGTGAACAGCATCCCGGCGTCCTTGACATGCGTCTCCAATGCGT
CATGCCAGGCGAGAATTCCCGCTCAGTGTATACCCCAATAGGTGGGTGTA
GGATGCACCTTACCATCGGCGATGGCCAGTGTGGCTACCGCGCTGTGGGT
GGGGCATTGATCAAAAGTAAAGGATATGCACGATCAAAAACAGTTGAAGA
CTTGAAGCGTTTGACGCAAGAAGCTGCAATCCGCCACATCATGCAGGGTG
CGACCCCAGCAGCAGCAGCAGCAGCAGCAGCACCTCCACCAACAGAAGAG
TTTGGCAACCGCCTTATCTCGAGAGATCAACTAGATAGGGCGCGCTCTCT
ACGCTTGTCTCAGATACGTGATTTGTGGGGGGAACTAGTAGACGAGGTCG
ACCCAAGCGAGAGGACGGCCGATTGGGTGGATAAAACTGTCAAGAAGCGA
GTTGAGGAGGACTGGCTGGATGTGACGTGGCTTGGGCTGCTTGCGGATAA
TCTCGGTGTCAATATCGTGTTGTGGGAACCATCTGGGATCGACCGTCTGC
TCCGGATTTACTCTGCTGGTGGATCGAAAGGATTGTTCTTGTACGACAAG
AAAGACCGCATGGATGAAGAGGGGGACCACTGGCTGCACCTACTGTATCA
CACAGATTCAAGGCCATTTACAGCTCGGGCAGAGATCACGTTGTCACAGG
ACGACCCGGTTGCGCATAACCATTTCACCTGGATCGACTTGGGTTCGGAC
GCAGTTACGGACTTCATAACCGCGATGTCATCGCGGCAGCAGCAGCAGCA
GGAGGGAGGTACCGGGCCATTGCGGGGTGCCCGCAAGAGGACGGGCACAA
CACAGAGTAGAGATAAGCAGAAGAGGAAGCAGCCCGACCAACCGCCAAAA
GGAAACGGTGGCACATCGAAGAAGCCTGGGCTTGAAACGCCGCAGCCTCT
GGACAAGCCTGCCAAGATCGAAAAGGGCGTCAAGAAGCGCAGGGCCAGGA
AAGGTGGGGACGACAAGGTGGTGAAGGAGAAGGATGTCTGCTATGATTCC
GACGGTAACATCGGCGGGGGAGACGACTTCGAATCGGCTGGGGCGTTTGC
GTGTTTGACGATCAACCCAAGGAAACTGACCTCCGACATCGGCAAGATAC
CCGAGATTGCATACAAGCGGGCGTTCCTGAAAAGCAGCCAGCGGAAAGCT
TTGGGCTTGAAGGTGACTGAACGTCAAGACACCCACTCGCCGTCTCATCG
CTGCCGAAGACGGATACGCCTTGACGCGAAGTCATCAAGCGAGGAGGGAG
GGCTTCCTTGTGGACGCCGTGGACGACATCAATCATCGGACCGACGGTAT
GGATAA
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