mRNA_P-littoralis_Contig635.58.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: D7G0Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z2_ECTSI) HSP 1 Score: 121 bits (303), Expect = 2.090e-29 Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 2
Query: 542 IEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPSANI-----EDDTDMITAISCITLGY 880
++H + V++G G + + T+ACV AC A + N+ P ++ +VPGGY MKLRVQLAVPV EEEVDVE IKKV PYGELLPIEFQ GGM S + + DMI AISC+T+GY
Sbjct: 1 MDHVLFVELGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVAEEEVDVEEIKKVFPYGELLPIEFQSGGMRASSGIALPEMGDTNDDMIVAISCVTVGY 119
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: W7TCK4_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCK4_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.580e-22 Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 2
Query: 401 VAAILGVTTVGHGFLVSPALHSCKASHQRDTQ--TIAAASRKQ-----LGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGY 880
+ + L + H F S LH+ + SH T+ TI A+S+ + G++ + V++G G + T+A V AC A + N+ P + ++VPGGYD MK+RVQ+AVPV +D EAIKK PYG+LLP+E Q GGM S A + + D I AI+ +++G+
Sbjct: 11 IVSFLAILLCPHAFFRST-LHATRNSHLPVTRSFTIMASSKASTSDVTVSSVEGMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYDAMKVRVQIAVPVDASNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMGDRNDDWIVAIAAVSVGW 182
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A4D9D6T6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 8.560e-20 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 2
Query: 503 AAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGY 880
A+ S + G++ + V++G G + T+A V AC A + N+ P + ++VPGGY+ MK+RVQ+AVPV +D EAIKK PYG+LLP+E Q GGM S A + + D I AI+ +++G+
Sbjct: 6 ASTSDVTVSSVEGMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYEAMKVRVQIAVPVDATNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMGDRNDDWIVAIAAVSVGW 137
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0JJU0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJU0_9EUKA) HSP 1 Score: 80.1 bits (196), Expect = 1.630e-14 Identity = 43/109 (39.45%), Postives = 68/109 (62.39%), Query Frame = 2
Query: 596 SPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPE-EEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGYGFHVSPD 901
+P++ACV AC A + N+ P + ++VPGGY+ MKL VQ+ VP VDVE + +V PYG ++ ++ + GG+L S A + ++DMI A++C+T+GY D
Sbjct: 4 NPSKACVRACRSAIEFNSLPSMRQLVPGGYEAMKLHVQIGVPSAYVSHVDVEQVSRVFPYGNVV-VDVEPGGLLADSGVALEAMGDKNSDMIIAVACVTVGYDRRTETD 111
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0IE99_MICPS (Hypothetical protein n=4 Tax=Micromonas TaxID=38832 RepID=A0A7S0IE99_MICPS) HSP 1 Score: 80.5 bits (197), Expect = 4.700e-14 Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 2
Query: 503 AAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELL-PIEFQHGGMLTPSA----NIEDDTD-MITAISCITLGY 880
A SR + G+ H + V++G+G + T+A V AC A + N+ P + ++VPGGYD MKL +Q+ VP +D+E I++V PYG++ PIE GG++ S + D +D + A++ IT+GY
Sbjct: 45 AVVSRPPPTEGMGMNHVLFVEIGMGADQHGQDATKAAVRACRNAIEFNSIPSIRQIVPGGYDNMKLHIQIGVPK-GAVLDLEKIRRVFPYGQICEPIEVVEGGLMARSGIKIPEMGDKSDEFVIAVAAITIGY 176
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S2KJ50_BIGNA (Hypothetical protein (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KJ50_BIGNA) HSP 1 Score: 76.6 bits (187), Expect = 2.260e-12 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2
Query: 542 IEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS 820
E + V+ G G + + T+A V AC A + N+ P + +++PGG D MKL+VQL VPV +EVD+E + KV PYG+L PI + GG++ S
Sbjct: 104 FEEVLFVECGFGCDQHGQNATKAAVRACRNAIEFNSLPGIRKVIPGGKDNMKLQVQLGVPVDADEVDLEQVAKVFPYGKLQPIIVEKGGLIGKS 197
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: R1FT88_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FT88_EMIHU) HSP 1 Score: 74.7 bits (182), Expect = 2.810e-11 Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 2
Query: 440 FLVSPALHSCKASHQRDTQTIAAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYDNTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGYG 883
F S A+ + R +A A+ K G+ H V++G G + T+A V AC A + S V ++PG Y+ M+L VQLAVP PE VD++A+ PYG L+ ++ + GG+ S A + M A++C+T+G+G
Sbjct: 10 FSTSSAVVLRAVAPHRSRPPVAQATSK------GLTHVALVELGSGCCHGGNG-TKAAVRACNSAIEWNSVKVRTIIPGSYEAMRLHVQLAVPEPEA-VDLDAVAACFPYGTLVRVDVEQGGLRASSRAGLLAEEPAEAHMTVAVACVTVGWG 154
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A6U2AUB5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2AUB5_HEMAN) HSP 1 Score: 74.3 bits (181), Expect = 3.940e-11 Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 2
Query: 539 GIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVP-EEEVDVEAIKKVLPYGELLPIEFQHGGM------LTPSANIEDDTDMITAISCITLGYGFHVSPDIRSIRARRAGGGXXTGAR-----SGKGGMKQAVHMMFGFGHDHGESTQNPTEACIRACIDAV--ESPP--KEMAEGGIEGMKLRVQLAVPASEE-EVDVEAIKKLFPYDELMP-IEFQRGG 1231
G++ + + G G + T+A V A A + N+ P + +VPGGYD M LRV LAVP +D+EA+KKV PYG + + GG+ L A++ DD ++ A + + G SP +AG R + GM QA+ + GFG D + N C+RA +A+ S P + + GG+ + + +AVP S VD E + LF L P + Q GG
Sbjct: 5 GMKSVLFTETGFGADQHGQDVTKAAVRAARNAIEFNSIPSIRRLVPGGYDNMALRVTLAVPPQYRANLDIEAVKKVFPYGVKTVVVQEGGGVFSSGIALRAMADVNDDMLVVCAHVAVGVSDG---SPPGGEEAMPQAGAAPGEVMREEFSVTEMEGMTQAMFIQAGFGADMPINDVNT--CCMRAVQNAMTFNSHPCLETVIPGGMPNVATHISIAVPKSMVGSVDRERVASLFK--GLTPTVSVQEGG 247
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0EY88_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EY88_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 1.140e-10 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 2
Query: 602 TQACVSACLGAYDNTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS 820
T+A + AC A + S V ++PGGYD ++L VQ+AVP PE VD++A+ + PYG+LLP+ GG+L S
Sbjct: 17 TKAAIRACNDAIEWNSVKVTTIIPGGYDALRLHVQIAVPAPET-VDLDAVARCFPYGQLLPVAVAEGGLLGSS 88
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A6V8M8B9_9BACL (Uncharacterized protein n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A6V8M8B9_9BACL) HSP 1 Score: 68.9 bits (167), Expect = 1.300e-10 Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = 2
Query: 560 VKVGVGYNFPEHSPTQACVSACLGA-YDNTSPPVEEMVPGG-YDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPSANI----EDDTDMITAISC-ITLGY 880
+++G+G + + T+A + A A + N+ P + ++P G D MK+RV+LAVP +++D+EA+KKVLPYG++ +E GGMLT S + +D D+I ++ + +GY
Sbjct: 7 IEIGMGADLHGQNVTKAAIRAVQNAIHHNSMPGLRSVLPDGTLDNMKVRVRLAVPCDRDKLDIEAVKKVLPYGQVT-VEVIDGGMLTTSGVVLPDKDDKNDLIYIVNAAVEVGY 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig635.58.2 >prot_P-littoralis_Contig635.58.2 ID=prot_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=466bp MRELRGSWKSAWKYVPSRIQVFALRKVVQSPLLSSDTAVVVVGAARSSIKback to top mRNA from alignment at P-littoralis_Contig635:104503..111778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig635.58.2 ID=mRNA_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7276bp|location=Sequence derived from alignment at P-littoralis_Contig635:104503..111778+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig635:104503..111778+ >mRNA_P-littoralis_Contig635.58.2 ID=mRNA_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1398bp|location=Sequence derived from alignment at P-littoralis_Contig635:104503..111778+ (Pylaiella littoralis U1_48)back to top |