mRNA_P-littoralis_Contig1164.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1164.1.1
Unique NamemRNA_P-littoralis_Contig1164.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: D8LB11_ECTSI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB11_ECTSI)

HSP 1 Score: 716 bits (1847), Expect = 1.870e-246
Identity = 378/471 (80.25%), Postives = 415/471 (88.11%), Query Frame = 3 
Query:  246 MMSSVVGKGIRSPPAWRVAANARARVAAAGRPAGRKSXXXXXXXXXXXXXXXXGVAGPSQQAKGGRSRSGGLYKALFLTGTGFAAGVAYGHLRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKNRQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHRPPRKSLRK 1658
            M++ VVG+ +RSP  W   ++ARARVAA GRP GRK+ XXXXXXXXXXXXXXX             SR  G YKA F  GTGFAAG A+ HLRPDKAR  YATLCDSV MPLLR+LD+EEAHT+A+KAAS GLAPKDWTMDDP+LA+ V+GLRF NP+GLAAGFDKH EAVDGLMDTGFGFVE+GSVTP PQEGNPKPRMFRL EDEGVINRCGFNSDGLR VQQRLK RQ S MN RAGLLGVN+GKNKLSED+SADFCKGIRTLGCYADYLVVNVSSPNTPGLRD Q VKAI+AVI++AMDARDQV ESTGNP PLPLLVKIAPDLTE+EK++IA VVLSTKVDGLIVSNTT+SRPS+LRSE+K E GGLSG+PLTK++TETIRDMYRLTKGKVPLIGVGGVGTGQ+AYDKIRAGASLVQVYSLLVY+GPGAVP IK ELA+LLKTDGF+SV EAVG+DHRPPRK+ RK
Sbjct:    1 MLNYVVGRAVRSPSGWSGVSSARARVAAGGRPIGRKASXXXXXXXXXXXXXXXXXXXXX-------SRGRGAYKAFFFAGTGFAAGAAFAHLRPDKARSGYATLCDSVVMPLLRMLDAEEAHTIAVKAASLGLAPKDWTMDDPILASHVMGLRFPNPIGLAAGFDKHGEAVDGLMDTGFGFVEVGSVTPNPQEGNPKPRMFRLEEDEGVINRCGFNSDGLRVVQQRLKKRQASAMNGRAGLLGVNVGKNKLSEDSSADFCKGIRTLGCYADYLVVNVSSPNTPGLRDLQGVKAIRAVILAAMDARDQVCESTGNPMPLPLLVKIAPDLTEREKRDIANVVLSTKVDGLIVSNTTVSRPSYLRSESKGEAGGLSGKPLTKMSTETIRDMYRLTKGKVPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSVAEAVGSDHRPPRKASRK 464
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A836CC01_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC01_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 2.560e-143
Identity = 244/408 (59.80%), Postives = 302/408 (74.02%), Query Frame = 3 
Query:  420 SQQAKGGRSRSGGLYKALFLTGTGFAAGVAYGHLRPDK-ARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKNRQTSPMNNRAGLLGVNLGKNK-LSEDASAD-FCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            S++ + G + SG L     L+    AAGV + +    +  R AY    D++ MPL+RLLD+E AH V+IKA ++GL+P D T +DP+L T VLGL F N +GLAAG+DK++EAV+GL+D GFGF+EIG+VTPEPQ GN KPRMFRLVED+ VINRCGFN+ G  AV +RLK R  +      G LGVN+GKNK ++ED +AD +C  I+ L  Y D++VVNVSSPNTPGLR  QR +AI ++I  A DARDQV+  T     LPLLVKIAPDLTE+EK +IA V LS++VDGLIVSNTTI+RP+ LRS  K E GGLSG PL   +T  I DMYRLT GKVPLIGVGGVGTGQ AYDKIRAGASLVQ+YS++VY G G V  +K+ELA LL+ +G++SV EAVGA HR
Sbjct:   29 SREPESGTTSSGNL---TALSAALLAAGVGWDYSNDFRFTRAAYLYASDNIVMPLMRLLDAESAHNVSIKATAWGLSPCDLTPNDPILQTQVLGLTFPNAIGLAAGYDKNAEAVNGLLDMGFGFIEIGTVTPEPQPGNDKPRMFRLVEDKAVINRCGFNNHGAVAVAERLKARAEAQQGPAKGFLGVNVGKNKWVAEDKAADDYCAAIKALAPYGDFVVVNVSSPNTPGLRLLQRREAIASLIERAADARDQVQVQTKKAT-LPLLVKIAPDLTEQEKADIAAVALSSRVDGLIVSNTTIARPAGLRSNFKGETGGLSGAPLRDASTAIIADMYRLTGGKVPLIGVGGVGTGQDAYDKIRAGASLVQIYSMMVYNGAGCVQRVKKELAALLRKNGYASVAEAVGAAHR 432
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: Q75XR0_EUGGR (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Euglena gracilis TaxID=3039 RepID=Q75XR0_EUGGR)

HSP 1 Score: 435 bits (1119), Expect = 2.560e-138
Identity = 224/378 (59.26%), Postives = 288/378 (76.19%), Query Frame = 3 
Query:  525 PDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKNRQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQV-RESTG-------NPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            P+    ++A + D+VAMPL+RLL++E AH  AI+AAS+GL P+D   D   L   V GL+FSNP+GLAAGFDKH EAVD L+ TGFGFVEIG+VTP PQ GNP PRMFRL +D  +INR GFNS GL AV++RL+ RQ  P   R GL+GVN+GKNKL EDA+AD+ KG+R LG YADYLV+NVSSPNTPGLR+ Q+  A+  +I ++M ARD+V R++ G       +  PLPLL+KIAPDLT +EK++IA VV+ TK+DGLIVSNTT+SRP+ L S +K + GGLSG PL +++T+ IRDMY LT+G VP++GVGGV TG+   +K++AGASLVQ+YS+LVY GPGA P +K+ L + L+ + F S   AVGADHR
Sbjct:   47 PELFWGSFAVVADNVAMPLVRLLEAEAAHDCAIRAASWGLVPRDVHPDPADLEMEVWGLKFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRLEARQHRPAP-RGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGKSAAPLPLLIKIAPDLTAEEKQDIAEVVMETKIDGLIVSNTTVSRPASLLSPHKGQTGGLSGAPLREMSTQAIRDMYALTRGTVPIVGVGGVATGEDVLEKLKAGASLVQMYSMLVYDGPGAPPRVKKGLLQALRREHFGSARSAVGADHR 423
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A2D4BER9_PYTIN (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BER9_PYTIN)

HSP 1 Score: 433 bits (1114), Expect = 1.390e-137
Identity = 233/416 (56.01%), Postives = 298/416 (71.63%), Query Frame = 3 
Query:  405 GVAGPSQQAKGGRSRSGGLYKALFLT-GTGFAAGV--AYGHLRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLK----NRQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADH 1631
            G AG S    G  S +GG++  + +  G G AA V  AY  + P    +    L D V MP +RL D E AH +A+K+ + GL P D   DD +L   VLG  F NP+G+AAGFDK +EA++GL+D GFGFVEIGSVTP+PQ GNPKPR+FRL ED  VINR GFNS GL +V +RL+     R+     +RAG+LGVNLGKNK +EDA+AD+ +G++ LG YADYLVVNVSSPNTPGLR  Q  + +Q ++   + ARD++    G  +P+PLLVKIAPDLT  +KK+IA V L+ ++DGLIVSNTT+SRP  L+SE+K E GGLSG P+ +L+T+ + DMY+LT G++PLIGVGGV +G+ AYDKI+AGASLVQ+YS LVY GP A+P  K+EL ELLK DG+ SV EAVGA H
Sbjct:   25 GAAGNS----GKPSSTGGVHPGVAVAVGGGAAAAVFAAYNGVVPHD--WLIKKLSDPVIMPFVRLFDPETAHVIAVKSTALGLVPLDEKTDDEILRVNVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRAVINRYGFNSQGLESVAKRLEAYMWRRENLSRWHRAGVLGVNLGKNKTTEDAAADYVEGVKALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELVSRVLTARDELVAQLG--RPIPLLVKIAPDLTADDKKDIADVALALQLDGLIVSNTTLSRPESLKSEHKHETGGLSGAPVRELSTQVLSDMYKLTGGRIPLIGVGGVSSGKDAYDKIKAGASLVQMYSCLVYDGPLAIPRAKKELVELLKADGYKSVTEAVGAAH 432
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A7S1JAW3_9EUGL (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAW3_9EUGL)

HSP 1 Score: 431 bits (1108), Expect = 1.430e-136
Identity = 236/414 (57.00%), Postives = 291/414 (70.29%), Query Frame = 3 
Query:  417 PSQQAKGGRSRSGGLYKALFLTGTGFAAGVAYGHLRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKNRQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQV-------RESTGN-PKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            P+   KG R+     ++A+ L G   A G+ Y  L P      Y    D V M  LR LD E AH V I++A++GLAP+D   DDP L   V GLRF NPVGLAAGFDKH++A+D L+ TGFGFVE+GSVTP PQ GNP PRMFRLVED GVINR GFNS+GL AV++RL  RQ +   NR GL+G+NLGKNK  EDA+AD+ +GI  LG Y DYLVVNVSSPNTPGLR  Q+  A+  +I SA  ARDQV       R + G   +PLPLL+KIAPD+T  E+K+IA VVL TK+DG++VSNTTI RP  L+S +K EGGGLSG P+  L+T  IRDMY LTKG VP+IG+GGV  G+ A +K++AGASLVQVYS+LVY+GPG     K+ L + L+ +GF +   AVGADH+
Sbjct:   31 PTPPRKGRRA-----WQAVGLAGA--AGGLGY-VLAPQAFWSGYTAFVDRVVMAGLRCLDPETAHDVGIRSAAWGLAPRDPVPDDPALDMQVWGLRFPNPVGLAAGFDKHAQAIDALLATGFGFVEVGSVTPLPQPGNPVPRMFRLVEDRGVINRYGFNSEGLAAVRERLHARQAARPPNR-GLVGINLGKNKEQEDAAADYAQGIAELGPYGDYLVVNVSSPNTPGLRMLQKRSAMADLITSAQRARDQVLQDEDGRRAAAGKGARPLPLLIKIAPDITPDERKDIAEVVLKTKIDGMVVSNTTIGRPPSLQSPHKAEGGGLSGAPVKALSTAVIRDMYALTKGTVPIIGLGGVADGEDALEKLKAGASLVQVYSMLVYKGPGLPRRAKRGLLQALRREGFPTAASAVGADHK 435
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A5D6XSB7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSB7_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 3.220e-136
Identity = 229/394 (58.12%), Postives = 289/394 (73.35%), Query Frame = 3 
Query:  465 KALFLTGTGFAAGVAYGH-LRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLK----NRQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADH 1631
            +AL L G   AAGVA      P +  +    L + V MPL+RLLD E AH  A+KAA+ GL+P+D   D  +L   VLG  F+NP+G+AAGFDK +EA++GL+D GFGFVEIGSVTP+PQEGNPKPR+FRL ED GVINR GFNS G+ AV  RL      R  S   +RAG+LGVNLGKNK +EDA+AD+  G+  LG YADYLVVNVSSPNTPGLR  Q  + ++A++   + ARD V       + +PLLVKIAPDLT+ +KK+IA V L+  +DGLIVSNTT+SRP+ L+S +K E GGLSG P+ +L+T+ + DMYRLT G++PL+GVGGV +G+ AY+KIRAGASLVQ+YS LVY GP AVP +K+EL ELL  DG+SSV +A+GA H
Sbjct:   44 EALALAGGIGAAGVAISQGFVPHE--WLVRHLSEPVLMPLVRLLDPESAHVFAVKAAALGLSPRDHGTDSELLKVNVLGQEFANPLGMAAGFDKDAEAMEGLLDMGFGFVEIGSVTPQPQEGNPKPRVFRLAEDRGVINRYGFNSAGVEAVAARLDAYVATRALSQRFHRAGVLGVNLGKNKTTEDAAADYIAGVHRLGKYADYLVVNVSSPNTPGLRSLQGRQQLEALLARVLAARDAVEAKER--RRIPLLVKIAPDLTDDDKKDIADVALALALDGLIVSNTTLSRPASLKSAHKSETGGLSGAPVRELSTQVLGDMYRLTNGRIPLVGVGGVASGKDAYEKIRAGASLVQMYSCLVYDGPTAVPRVKKELEELLVADGYSSVVDAIGAAH 433
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: H3GAQ0_PHYRM (Dihydroorotate dehydrogenase (quinone), mitochondrial n=17 Tax=Phytophthora TaxID=4783 RepID=H3GAQ0_PHYRM)

HSP 1 Score: 419 bits (1076), Expect = 3.870e-133
Identity = 217/361 (60.11%), Postives = 272/361 (75.35%), Query Frame = 3 
Query:  573 MPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKNR------QTSPMN-NRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            MP++RLLD E AH VA++ A FGL PKD   D  +L    LGL+F NP+G+AAGFDK +EA++G++D GFG VEIGSVTP+PQ GNPKPR+FRL ED GVINR GFNS GL     RL         +T+P N +RAG+LGVNLGKNKL+EDA+AD+ +G+  LG YADYLVVNVSSPNTPGLR  Q    +Q +++  + ARD+V  +T   + +PLLVKIAPDLT+ +K++IA V L  K+DGL+VSNTT+SRP  L+ E K E GGLSG P+  L+T+ + DMY+LTKG++PLIGVGGV TGQ AYDKIRAGASLVQ+YS L+Y  P AVP  K+ELA LL+ DG+ SV +AVGA H+
Sbjct:    1 MPVVRLLDPETAHKVAVQCARFGLTPKDPEDDPELLRVRTLGLQFPNPLGIAAGFDKDAEAMEGMLDMGFGCVEIGSVTPQPQPGNPKPRVFRLYEDRGVINRYGFNSKGLEHAGARLHEYVAERAVRTAPGNGHRAGVLGVNLGKNKLTEDAAADYVQGVHALGQYADYLVVNVSSPNTPGLRTLQGKLQLQQLLVRVIKARDEV--ATQEKRDIPLLVKIAPDLTQDDKQDIADVALELKLDGLVVSNTTLSRPDTLQGEAKGETGGLSGLPVRDLSTKVLGDMYKLTKGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELAALLRRDGYESVADAVGAAHK 359
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A8K1C5T7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5T7_PYTOL)

HSP 1 Score: 420 bits (1080), Expect = 1.260e-132
Identity = 214/364 (58.79%), Postives = 274/364 (75.27%), Query Frame = 3 
Query:  555 LCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKN----RQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            LCD V MP++RL D E AH +A+K  + GLAP D  +D   L   VLG  F NP+G+AAGFDK +EA++GL+D GFGFVEIGSVTP+PQ GNPKPR+FRL ED+ VINR GFNS GL +V  RL +    R+     +R G+LGVNLGKNK +EDA+AD+ +G++TLG +ADYLVVNVSSPNTPGLR  Q  + +  ++   + AR++V    G  + +PLLVKIAPDLTE +K++IA V L  K+DGLIVSNTT+SRP  L+S +K E GGLSG P+  L+T+ + DMY+LT G++PLIGVGGV TG+  YDKI+AGASLVQ+YS +VY GP AVP  K+ELAELL+ DG+S+V EA+GA H+
Sbjct:   72 LCDPVIMPIVRLFDPETAHVIAVKTTALGLAPVDTEVDPESLRVKVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLSEDKAVINRYGFNSQGLASVAARLDSYVASRELRSAWHRNGVLGVNLGKNKTTEDAAADYIEGVKTLGRFADYLVVNVSSPNTPGLRSLQGKQQLFELVSRVLTARNEVETQEG--RKIPLLVKIAPDLTEDDKRDIADVALDLKLDGLIVSNTTLSRPDTLKSVHKGETGGLSGLPVRDLSTQVLGDMYKLTDGQIPLIGVGGVSTGKDVYDKIKAGASLVQMYSCMVYDGPLAVPRAKKELAELLQADGYSNVTEAIGAVHK 433
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A3M6VCA1_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCA1_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 5.370e-132
Identity = 222/405 (54.81%), Postives = 285/405 (70.37%), Query Frame = 3 
Query:  441 RSRSGGLYKALFLTGTGFAAGVAYGHLRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRLKN-------RQTSPMNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            +S S GL+ A ++   G  A V   +       +    L + + MP+LRL D E +H +A++ A FGL PKD   D  +L    LGL+F+NP+G+AAGFDK  EA+ G++D GFG VEIGSVTP+PQ GNPKPR+FRL ED GVINR GFNS GL  V  RLK        RQ     +R+G+LGVNLGKNKL+EDA+AD+ KG+ TLG YADYLVVNVSSPNTPGLR  Q    ++ +++  +DARD+V  +T   + +PLL+KIAPDLTE +K++IA V L   +DGL+VSNTT+SRP  L+   K E GGLSG P+  L+T+ + DMYRLTKG++ L+GVGGV TGQ AYDKIRAGASLVQ+YS L+Y  P AVP  K+ELA LL+ DG+ SV +A+GA H+
Sbjct:   23 KSSSSGLHTAAYVAVGGAVAAVMAAYTGVVPHEWVIRQLTEPL-MPVLRLFDPETSHQIAVQCARFGLTPKDPEEDPELLHVKALGLQFTNPLGMAAGFDKDGEAMKGMLDMGFGCVEIGSVTPKPQPGNPKPRVFRLHEDMGVINRYGFNSKGLDYVAARLKRYVGSRAKRQAPGNGHRSGVLGVNLGKNKLTEDAAADYVKGVHTLGKYADYLVVNVSSPNTPGLRTLQGRNQLKNLLVRVIDARDEV--ATTEKRNIPLLLKIAPDLTEDDKQDIADVALELNLDGLVVSNTTLSRPDFLKDAAKAETGGLSGLPVRDLSTKVLSDMYRLTKGRILLVGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELAMLLRRDGYESVVDAIGASHK 424
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BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Match: A0A662X2Z7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2Z7_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 1.330e-131
Identity = 221/393 (56.23%), Postives = 287/393 (73.03%), Query Frame = 3 
Query:  483 GTGFAAGV--AYGHLRPDKARFAYATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVLGLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRMFRLVEDEGVINRCGFNSDGLRAVQQRL------KNRQTSP-MNNRAGLLGVNLGKNKLSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIISAMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIVSNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIGVGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDGFSSVEEAVGADHR 1634
            G G AA V  AY  + P +  +A   L + + MP++R+ D E AH +A++ A FGL PKD   D  +LA  V G  F NP+G+AAGFDK+ EA++G++D GFG VEIGSVTP+PQ GNPKPR+FRL ED GVINR GFNS GL  V+ RL      +  +T+P   +RAG+LGVNLGKNK +EDA+AD+ +G+  LG YADYLVVNVSSPNTPGLR  Q  + +Q +++  ++ARD+V  S    + +PLLVKIAPDLT  +K++IA V L+ K+DGL+V+NTT+SRP  L+S  K EGGGLSG P+  L+T+ + DMY+LT+GK+PLIGVGGV TGQ AYDKIRAGA+LVQ+YS L+Y  P AVP  K+EL  LL+ DG+ SV +AVGA H+
Sbjct:   46 GGGAAAAVIAAYNGVVPHE--WAIRQLAEPM-MPVVRMFDPETAHQIAVQCARFGLTPKDDQPDASLLAVDVFGQTFPNPLGIAAGFDKNGEAIEGMLDVGFGCVEIGSVTPKPQPGNPKPRVFRLSEDRGVINRYGFNSKGLDDVRARLEKYVASRETRTAPGQGHRAGVLGVNLGKNKTTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLVRVLEARDEVAAS--EKRAIPLLVKIAPDLTTDDKQDIADVALALKLDGLVVANTTLSRPDSLKSSCKIEGGGLSGLPVRDLSTQVLGDMYKLTEGKIPLIGVGGVSTGQDAYDKIRAGATLVQMYSCLIYESPLAVPRAKKELTALLRADGYESVADAVGAAHK 433
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB11_ECTSI1.870e-24680.25Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A836CC01_9STRA2.560e-14359.80Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
Q75XR0_EUGGR2.560e-13859.26Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A2D4BER9_PYTIN1.390e-13756.01Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A7S1JAW3_9EUGL1.430e-13657.00Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A5D6XSB7_9STRA3.220e-13658.12Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
H3GAQ0_PHYRM3.870e-13360.11Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A8K1C5T7_PYTOL1.260e-13258.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VCA1_9STRA5.370e-13254.81Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A662X2Z7_9STRA1.330e-13156.23Dihydroorotate dehydrogenase (quinone), mitochondr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1164contigP-littoralis_Contig1164:3470..14642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LB11
Preferred nameDHODH
PFAMsDHO_dh
Model size3517
Max annot lvl2759|Eukaryota
KEGG rclassRC00051
KEGG koko:K00254
KEGG ReactionR01868
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0004152,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0007275,GO:0007565,GO:0007584,GO:0007589,GO:0007595,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009163,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009410,GO:0009605,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010821,GO:0010941,GO:0010942,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0019866,GO:0022414,GO:0022603,GO:0030879,GO:0031000,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0033043,GO:0034404,GO:0034641,GO:0034654,GO:0036094,GO:0036270,GO:0036477,GO:0042221,GO:0042493,GO:0042594,GO:0042981,GO:0043025,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046112,GO:0046134,GO:0046390,GO:0046483,GO:0046903,GO:0048037,GO:0048038,GO:0048039,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048732,GO:0048856,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051704,GO:0055086,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072527,GO:0072528,GO:0090140,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1903576
Exons10
Evalue6.84e-258
EggNOG OGsCOG0167@1|root,KOG1436@2759|Eukaryota
Ec32 ortholog descriptionDihydroorotate dehydrogenase, class 2
Ec32 orthologEc-27_005670.1
EC1.3.5.2
Descriptiondihydroorotate dehydrogenase activity
Cds size1416
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1164.1.1prot_P-littoralis_Contig1164.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1164 5326..14397 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789483.9188669-UTR-P-littoralis_Contig1164:3469..53251680789483.9188669-UTR-P-littoralis_Contig1164:3469..5325Pylaiella littoralis U1_48UTRP-littoralis_Contig1164 3470..5325 -
1680789484.041179-UTR-P-littoralis_Contig1164:14397..146421680789484.041179-UTR-P-littoralis_Contig1164:14397..14642Pylaiella littoralis U1_48UTRP-littoralis_Contig1164 14398..14642 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789483.9321501-CDS-P-littoralis_Contig1164:5325..54751680789483.9321501-CDS-P-littoralis_Contig1164:5325..5475Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 5326..5475 -
1680789483.9418314-CDS-P-littoralis_Contig1164:5871..59521680789483.9418314-CDS-P-littoralis_Contig1164:5871..5952Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 5872..5952 -
1680789483.9565709-CDS-P-littoralis_Contig1164:6918..70711680789483.9565709-CDS-P-littoralis_Contig1164:6918..7071Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 6919..7071 -
1680789483.9690921-CDS-P-littoralis_Contig1164:7462..75731680789483.9690921-CDS-P-littoralis_Contig1164:7462..7573Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 7463..7573 -
1680789483.97774-CDS-P-littoralis_Contig1164:7894..80561680789483.97774-CDS-P-littoralis_Contig1164:7894..8056Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 7895..8056 -
1680789483.988053-CDS-P-littoralis_Contig1164:8652..88061680789483.988053-CDS-P-littoralis_Contig1164:8652..8806Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 8653..8806 -
1680789483.9967313-CDS-P-littoralis_Contig1164:9767..99641680789483.9967313-CDS-P-littoralis_Contig1164:9767..9964Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 9768..9964 -
1680789484.0070114-CDS-P-littoralis_Contig1164:10477..105971680789484.0070114-CDS-P-littoralis_Contig1164:10477..10597Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 10478..10597 -
1680789484.0206835-CDS-P-littoralis_Contig1164:11142..112081680789484.0206835-CDS-P-littoralis_Contig1164:11142..11208Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 11143..11208 -
1680789484.0306432-CDS-P-littoralis_Contig1164:14175..143971680789484.0306432-CDS-P-littoralis_Contig1164:14175..14397Pylaiella littoralis U1_48CDSP-littoralis_Contig1164 14176..14397 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1164.1.1

>prot_P-littoralis_Contig1164.1.1 ID=prot_P-littoralis_Contig1164.1.1|Name=mRNA_P-littoralis_Contig1164.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=472bp
MMSSVVGKGIRSPPAWRVAANARARVAAAGRPAGRKSSSSSTTAAGETPA
AAGGVAGPSQQAKGGRSRSGGLYKALFLTGTGFAAGVAYGHLRPDKARFA
YATLCDSVAMPLLRLLDSEEAHTVAIKAASFGLAPKDWTMDDPVLATTVL
GLRFSNPVGLAAGFDKHSEAVDGLMDTGFGFVEIGSVTPEPQEGNPKPRM
FRLVEDEGVINRCGFNSDGLRAVQQRLKNRQTSPMNNRAGLLGVNLGKNK
LSEDASADFCKGIRTLGCYADYLVVNVSSPNTPGLRDYQRVKAIQAVIIS
AMDARDQVRESTGNPKPLPLLVKIAPDLTEKEKKEIAGVVLSTKVDGLIV
SNTTISRPSHLRSENKDEGGGLSGRPLTKLATETIRDMYRLTKGKVPLIG
VGGVGTGQQAYDKIRAGASLVQVYSLLVYRGPGAVPDIKQELAELLKTDG
FSSVEEAVGADHRPPRKSLRK*
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mRNA from alignment at P-littoralis_Contig1164:3470..14642-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1164.1.1 ID=mRNA_P-littoralis_Contig1164.1.1|Name=mRNA_P-littoralis_Contig1164.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11173bp|location=Sequence derived from alignment at P-littoralis_Contig1164:3470..14642- (Pylaiella littoralis U1_48)
CAAATAGGGGCTACCCCCCTTCCCCCTGCTCCCCACCCTGAGTGAGTCAA
CACTCAACACCTCCCCTGTCAAATGAGATTCTCAAAAAAAATCCGAATTT
CAAGAAACGACATTTTTTACTCCGAGTATTTTCCTGTCAGAGCTGTTCAT
ACAGGAGTCAAAGGGCGACCAGCACATAAATTTATCATACACAACCACGA
TCGACCAGAGCCATTACGCTGTGCTTGTTTGTCTCAGTCAAGACGATGAT
GAGCTCGGTCGTAGGTAAGGGCATCCGCTCGCCACCCGCTTGGCGCGTTG
CAGCCAACGCGAGGGCACGCGTTGCTGCTGCGGGACGTCCGGCGGGAAGG
AAATCAAGCAGTAGCTCGACAACAGCAGCAGGAGAGACACCGGCTGCAGC
AGGGGGAGTCGCCGGGCCCTCTCAGCAGGCAAAGGGGGGCAGGTCTCGGA
GCGGAGGGCTATACAAGGTAAAAAGCGTCGCCACGATCAGCGGGGCAGTA
GAGGAGTGATTGAGGGACTTTGTCTTTCGTTCTACGTGTATTTGGTATGG
CGTGTTGCGCTTTTACACATGATGTACGTTTTTGTGTGCGTTGTCTTCCA
AGCATGAGGCAGTTCTGATTACACCGCCCTTGCCTGTCGACGAACACACA
TGCACGGCGGAAGACGACCATTCCACGCGTACGCCCCGTTCGGGAGCTTG
ACTGTCGCACACAGGTGTCGCATTTGGAGCTTTATAGTGATGCCGGGAAA
GTATTCGGTCCCTTCCCTGCTGCCCGCTTGAAATATAGCTGCTCCGAAGG
TTGCCGTGCGGAGTATTTCACAGTGCCCGTTCTGCTTCATGTTACAATTA
TCAACATGTATCATAGGGCAGTTCCGTCCAGCTGTTTATTCTGCATCTAT
ACGCGTACTTCGCGAAGATGAGCAAGCAGATTGAACCTTCACATTTGTTA
CTCTCCGGCTGCATGTGTCGTATGCTGATTCTCTCTGCGAGGTCACAAAC
TGCTGCTGTGCTGCTGTACCGACCCCTCCTGCGCTGTACTGTTGTTGTAC
TGATGGTGTACGGCAGCACACTTTCAACCTTGAACGATGTTACTGGAGAA
ACATTTACAGCAGGCCGCCGGCGAACCTAATCCACATGGCGGTGTTGTGG
ATATGACATCCAGCAGTCAGACCACACGTTATGGAAGGGAAAAGTATTTC
TGAAAGTTGACCACCCCCCCCAAGTGACAACATTTTTATATAAACTTTTA
AGCAAACGTGGTATGGGCCGGAATATCCAAATCTATTCATGTCCCAAATG
TTGTGGGGCTGGTGCTTGACTTGGAGAGAGCAAAAATGACAGCCTTCAAA
CAGAGACACTGGAGCACACTACAATCGATTTCTCGCTCCATAGAGCACGT
ATCAAGCTAAAACCTGGAAGGATAGGATCTCTATTCGCTGCTTGCCGCCA
GCAGCGGGTTGGTTTGGCGGTGGGATCCATCCATCAGGAAGGAGCAGCAG
CGCTCGAGGGTGTGGGCTTAAAAAAAAAACGTTTTCTAGGCAGCAGAAGA
AGCTCTGTATTTTCAAGAGAAAAAAAACGAACAGATTTTGCGTTTTTTTG
TGAAGCCCACACCCTCGAGCGCTGCTACCCCTTGCTGATGGATCGACCCC
ACCACCAAACCAACGCGCTGCCGGCGGCAAGCAGTGAATAGAGATCACAT
CCTTCCACGTTTTAGCTTGATACGTGCTCTATGGAGCGAGAAATCGATTG
TGATGTGCTCTCGTGTCTCTTGCAAGGCTGTCGTTTTTGCTCTCTGGGGC
CCAAAAATCGCTTCTGACACCCTCTGCTTGAACCCTGAGGTGAAATGTTT
TTTTTGTGAACGCCTGAACAACAACCGCCACCGGCCACCGCCCAGGTTGG
CAAGACCATGCACCCAGGGTTGCTCCGAGCCCTTGATGAGCGCGCCACGT
TCGGTATTTCTGGCGTAATCATTGGTTGTATCGACTGGTGTGCTGTCTGC
ATGATCATGCGGCGCAATCGACCCCCCCCTCTGACAAAGATTTGGAGGAG
GTGCTGCTTGTCCAAAAGTATGGCCATACTTTTCCAAAAACCAGCCTCGC
AAATCTGGACCAGAAAGTTTAGGGGGCCTCGCGTGGTCAATTTGCACAAC
CCCCCCCAAAATAATCGAGATCCAGAAATACTTTTCCCTCCCATAACGTG
TGGTCTCAGTACAAATTGCGAATTATGATGCGTGATGCACAGCCAAAGTG
CCTTCAAATGTAGTGATGTGTCGACGGTCGACGGTCGTGTACACTCTGTA
ACAACCAAACGAAACGCAGGGGAAATAGCGCATTCCTGCACATGAGACCA
AAGTCGGGTGGCATCTCGAGCCGAGAAGGTGGCAAAGAAGTACTGCGCTA
ACTGGACTCGCAGAAAAGCTCGGTGCCTTGTTTTTTGTTGGCAGAGCTCT
CATGAGCAACGTAGCAGTACTTGTACGAAGTATTTTACAGATTTTTGTCT
AGATAACAACCTACCATTTGTCTCGTTGTCTCACATGTGTCCCCCTGATG
CTGAATCTGGAGTAAAACCTTCGGCACTGCTGTGCATAACCCTGGAATTT
TATTTCCGACACTATACCTCAAGTCATTCCAGTCGGCACTACTGTACTGC
AGTCAATTTCGACTTAAAGCAGTACAAATGTCTCACCTCAAGGAAATTTT
TACGTACCGTATGACAGCAGGCATATTTTGCAGCGTTGCTCATGTAATTT
CAGGCAGTTTTTGTGCCCGACGAGTGGCAGGAGCACTAGAGAGAGAGAAA
AGGTGCCTGCAGTTTTTTGATTGGCCAATTTTCGAATTACACTTTTTTTG
TCGTGAAATGCCGTGCTGCCTTGGCTCTTTGTCATCAGCGTTTGCCATGT
ACTTGCGTTGCGACAGATGCTCTCGTGGCAATCCCACACAAATCAAAACA
AGTAAAGCAGCCAAACACGTGGTTCACGTGGTTAATAGCGGGACGGGACG
GGGGGGGCTGCTGTACATCGTGATATTGTACGTAGTCGGATAGAGATCTG
CAGTAGCGTAGTGTGGGCCAGTTTACCACCTCGTACACACCAACACACCA
ACACACCAACTGCAAGTATATCTGTAGGAGTAAAGGCGTACTTTCTACGG
CGTCCGTGTCTTTTCCTTTTCCTCGTGTGATTTTTCGGATCTTTACGGGG
CTCAGCACTTTAGTGACCACGGGCTAGATTTTTGGCGCGTACTGTCTGTG
TGTCTGATCCGATATATATATATTTTTTCTTGAAGACACCGACAACACTA
CAGTAACCCAACGACAAAAGCATCACAACAACATACAACAAAGCAACAAA
ACAACAAACAACAACAACGACAGCATGTGACTCGCTTGAGCTTGACCTGC
TGCCGGACCGTCGGCTTCGGTTTGATTCGATCAGGCGTTATTCCTCACCG
GGACGGGGTTTGCAGCGGGAGTGGCGTACGGCCACCTCCGTCCGGACAAG
GTGATTGCGATGCCTTCCTCTCGAACTTTTTGAGTCTTTCCGGTGAAGGA
CCACGATTAGACCCGATTGAGTTGGTATTTTGTACGCGAAAATGCAGTTG
TTGCTGCTGCTGCTGCTGCCGCCGCTGCTGCTGCTTTCATGTCATGGACG
ATGGTTGCGTCACCTTTCGCCCGAAGAGGCCTTTCTTTATCTTTGGACCC
TGTCTGGTTGTGAGCAAAATGATACCCCGTAGCAAACGCACGCCGCACGG
CCATCACCTCGACGGCGTTCGACATGATACGTGCTTGTTTCACTTCCATG
AACCGCTTTCGTGTGGTACGAGGCAGCGAAAAAGCGCGAAAGCGTGGGCG
TTTTATTCTGCCTCCCCGCCACCTGCTTGCCTTCCTTCCCTTTTCCTTTC
TTTCCGTCATGTTTTCCGCCCGCCCCTCTTCTGGGTGGTGTGAGTGAGCG
GTCGTTTTATTTTTTTATTTTTTTCATCCTTCCCCACTAATCATCTCGAC
GAAATGTATGATATCATTGTACTGTATGTACTCCGTATACAACAGGCCCG
CTTCGCCTACGCGACGCTGTGTGACTCTGTGGCGATGCCGCTGCTGCGAT
TGCTGGACTCGGAGGAGGCGCACACTGTTGCGATCAAGGCGGCCTCGTTC
GGCCTCGCGCCCAAGGTAAACAACCACCCAATTCCCCCCTCCCCCCCCCC
CCCCCTTATTTTTCGCTAAAATTAGCACCCGTGATGTATTCCCCCGCCCC
GCGACCCGTGAGATACGACAAAAGCGGCGAACGCGAGCGGCCAAGGAGAA
AAGGGGGTACTGCTGTTGCTGCAAACGATACGCAACACGTTTTTGGACGT
GAAGATAATGTTGGCAAAAACGTACACAACGGCTGACCAGATGTTCCATC
ACGCTGCTGTGTCTTTCCCCATTGGAAATTGAACATGATCCCATTGTGGT
TCGGCAGACGCAAAATGCGTTGGACTAACGTGGTGACGCTGATACGATAG
GGAGCAGAGACGGTGGGTGCTTCGTCTCGAAAGTAGAAGATGGATGCATG
ATCGGTGCCCCCAGCACGAAACTAGCCTCGCCCCTTCTGTTGCAACGCAC
GCGGACGGCTCATCCTGCACTGTACCCGCCTGCCGTGTGCACGCCCGTTC
TTTTTTTTTTTCTTGTTTCTTTTTTTAGGATTGGACCATGGATGACCCCG
TCCTCGCGACCACCGTGCTGGGGCTGCGGTTTTCCAACCCGGTCGGACTG
GCGGCGGGTTTCGACAAGCATTCGGAGGCCGTGGATGGCCTGATGGACAC
CGGGTTCGGCTTCGTGGAGATCGGGAGCGTTACCCCCGAGCCTCAAGAGG
GCAACCCCAAGCCGAGGATGTTCAGGTGTTCCGTGGTTTCTATGCATTCC
GCGTGTCCGAAAGCTGATTCGCCCACACGTCGTAGAAACAGAAAGGTGTA
GGCTAGTTCCAGGGCAGATGGAATTGGACGCACACACGTATGACACACAC
GTACATGAACAGTCAGGGCGGTAGGACCCCGGCCGGGAACCGTTTGTGTA
CATGTGAGACTGAAGGAAACGGAAGACGAATAGACACGGGTTGTAGTTGA
GAAGTTGGGGATTATCGGGAGAAAAAAAAATACGGTGACGTCGGTGTTTT
CGTCTGATGATGTCCATGTGGAGATAGGTCGAGCATTGGTTCGGGCGTTA
GCCGAGGGTGTTAGCCGAGGGTGTTCAGGTATTCTGTGGAATATGAAAGG
ATCTTCAATCATCAAACTTAGGGCCCATTGCCTCATTTTACAGCAGAAGT
GGTTTCGTTGCCTCTTCTTTGTTTTCCATAAGACTCCATGGGCTGTTGGG
AGGCAGACTAAAAGGCGCGGTTAAGCCCCGTTCACAGCAGTAATGGTCTC
AGCTATATCGTCCACGTCACATGTCAATCAAGTCTCTGAGTAAATACCTA
CTAAGAGACAACTCCCGTGGTCCCAACTCTACACGCCCATAGACGCGCAA
GCAAGGTATGCTATCTTCTTTACGATAATATACTAAGTATAGTACTCACG
GATCGCACTCAAAAACATTTTCTCTCTTTATGTTATATCTTCTTGCATCT
AGGCTGCTGGAAGACGAGAGCCTACGGCGGCGCGACTAACCTACCATTGT
TCTCCCACGGATCGCACTCGAGAAGCACCTGGCCTCTCTCACTCTCTCAC
GTTTGTTTTTGTTTTTAGTTTAGGCCGCTGGAAGACGACGATCAGATCAC
AGTCCATGCTGCATCTTCATGATATCACAGATGGGCTAAAAACATTTTTT
CGACCTCTCCTTCTTTCTGTTTGTGCATTCCATTAGGCTAGTGGAGGATG
AGGGCGTCATCAACCGCTGCGGCTTCAACAGCGACGGCTTGAGGGCGGTG
CAGCAGCGCCTGAAGAATCGCCAGACTTCCCCGATGAACAACCGTGCCGG
CTTGCTTGGCGTCAACTTGGGGAAAAACAAGCTATCGGAGGTGCACTTAG
CCTCTTATGCGTTTTACTTAAGTTTCCTCTGTGCCTCTGCCCCTCCCCGG
ATCAATTTGAAAGGCAACGCTGGGCGAGCGCCCGCTCCGAGATCTTGCGG
TGCTCCGTGACGGTATTTTTGGCTCCGAAGGGTTTGATTTTTTTCTGTTT
CGTGTCAATCTTCTAGGTAAAAAATCCTTTGCGGAGCCTCCCCTGACGGC
TGTTCGCGCCACATCCCAACTTTTCTCGTTGAAGCTGTGGGAGACAAGAA
GCAACAACCGGATCGAAGCACCTCGATCACATTTATTTGAGCTCCATTTC
GGTCGCATCCCCGCAGCTTCTTAGTGGAAGGCGATACAAGACAGAGGTAG
TCGGAGCGGCTTGGTCGCGACTTGAATGGTTTCACGTATGGTTGTCTTTC
AAATGCGCGAGGGAGAACGCGGAGGCTGTGAGAGGTGAGTACGCGCGTTT
GCACCTCAACCGACTTTTTCCCGCTGCGATCCTCGTGAATGATGATGGTG
TGTTGCTGGTCAGGTAAAGGGGCATGCTGCCATCTTAACCCCTCCCCCCC
CCCCCCTCCTCTTTCCTGTTGTCGGATATCTCGCAGGACGCCTCTGCCGA
CTTCTGCAAGGGCATCCGGACGCTCGGCTGCTACGCGGATTACTTGGTGG
TGAACGTGTCATCTCCCAACACGCCGGGGCTGCGCGACTATCAGCGCGTG
AAGGCCATCCAGGCCGTAATTATTTCGGCAATGGATGCTAGAGATCAGGT
GACCGGCATTGACCACTCATTGTTGCTGTCGACGGTGGTGGTATGTATTA
CTGTGGTGGTGACGGGATTTTCGTTTTTCTTTTCGAGCGAAATCTCTCAA
GGAGGTGATGTGCTAGTTTCTCATTTTGCCTGTGTTTGACTTGCGAGCCT
CCGGTTCGTCTCTTTGTTCCTCCGAAATTTTCTCCAACGTCAATTAGCAG
CAGTGACACCAACGTGATTAGCATTGCGTGAAACGTTATTTTAATGTGGC
CCCTATTGTAATCCCCTTGTCGCTTGTGGCTTTCGCGCCCCCCCCCTCCC
CTTCATCTTGTCAACGAAGGTCCGCGAGTCCACCGGCAACCCGAAGCCTC
TGCCGCTGCTGGTGAAGATCGCCCCGGACCTCACGGAAAAAGAGAAGAAG
GAGATTGCCGGCGTCGTCCTGTCCACCAAGGCAAGCGAGCACCGTAGATT
CCGTAGATTCTGTAGATTCCGCAGATTTCGTAGAACCGATTCCAAACCTG
CCGCAAGAAAGTAAATAAGCAGACAAGCGTAACGGCCTAATCCTTTCCCA
TCGCCCCCTTCCATGATATTGGCAATAGTTGCACCCGCCCCCCGGCACCA
CCTCCACCCCCAACCCCGAGATGGACAGGACTTTTGCGTGCGCACCCCTT
CCCCCCCACGTCCGTTACTCCGGTCCCTTGTGATGATTTTGGGTGTACGA
CCTGTTGGCATTCCGACCCCCTTCACGATATTGTAGCAAGGACGCACCAG
ATAGATGTGTGGATGCTTGATTGCACCGCCCCCGCCCCCTCACCTCACCT
CACCTGTCTCTTCCTTTGTAGGTGGACGGCCTCATCGTTTCGAACACGAC
GATATCTCGGCCGTCGCACCTCAGGAGCGAGAACAAGGACGAGGGCGGCG
GACTCAGCGGACGCCCTTTGACGAAGCTGGCCACCGAGACGATTCGGGAC
ATGTATCGCCTCACCAAAGGAAAGGTGAGCACTGTATGACATCTTGCGCG
TGTGTATTGTGTGTGCATGTATGTGTATGTGAGTGTGCGCGTGCGTGCGT
GTTGTTTTGTCAGCAAAGAGACCGTGCGGGGCGGCTAACCAATGATAATT
CGCCAGTTTTCGAGGCTCGAAAGACAACAACGATTCCTTCAGTCGTTGTC
CATCCCCCGATAAGTCCTTTGTCCGTGTGTGTACGTGTGTGCGTGCGTGT
GTTGCGTGCGCATTTCGGGGTCCGGATCAATCCACGGTAGCCGAGTAGCT
TCCGCGTGCTCGCCCTCTGCTCTCGGGCACTCTTTGCTGGAAGCTTCCGC
AAGGTTCCATGGAAGTTTCTTCCCCATACTTTCGTGTGCCAGCCTCCTTC
TCCGTGGATGGCGCTTTGTGGTGGCAAACACGTCACGCCGCTGTTTTCGC
TGAGACCGATACGATGTCATATGCTACATGGCCACGGGTGATTGCACACT
GCCTCGCCAAGCCTTTCTCTATAGGACTAAATCTTTGGGTGTCGTTGTTT
TAGCACTCACATCGTCAACCCCTGTGCTGTGTTTCGGGAGTTGTCGTGCA
TGGTTATTGACAAAAGTCGTGCGAGTGCAACCGATACTGCTGTCGTACAC
GTCTATCGTAAGGGTTGCCCGGTATTTTGCGTGTGTGTTCCATTGCCGTG
TAGCCTTCGAACAGATATTATACCAACTTTTGCACACGCGAGTCGTTTCT
AACCAGTAAGAGCAGTACAGAGAGTAAATATAAAATTTCGTTTACTGGAA
AGACGCCGGCGTGGTTTGAGTGCGTACACTACAACCGCAGTAACATAATC
GTATCTCGACCCAGTTAGAACATAACAATACGAAAATGAGTTGCTGGATA
GAGGCGGCAACGGCTTTGTAAAAGAGAAAACATCAAACAACAACAACTCC
ATTGCGCCAACCCCCCTCGTTGCTTGTTAACTGGTGGCAGGTTCCTCTCA
TCGGTGTGGGCGGAGTGGGAACGGGGCAGCAGGCCTACGACAAAATTCGC
GCGGGAGCCTCCCTCGTACAGGTAATTCGCTTTTTTGTTTTTTGGGGGGG
GGGGATGGCGGCACAGGTGTGGGGTTGTTTACAGTCTTCGGAAGGCGAAA
AGGCAGCGTCCTGCAGCCCGGCTCTGCGGGGATGGGAGCTTCTGTATGGG
AACGAGCTGAGGCTATGCATGATCACGGAGAAATTCCGACCAATACTCCC
TGCCGGCATTTCACTGCTCCTCAATCAATGGTAAAAAAATACACAAGGGG
GAAGCAATTGTTGTTTTAGTAGCAATAGCGGCCTCCAAAGTTCATCGTCA
CGAAAAGGTGACTCGGTCAATGATTCAACGACGAAGGCGAGCAACAATTG
AGGCCCCCCAGAATTGCCATCTGCACTACAATCCCCCCCCCCTCCTCATA
TACCGCTCGCCCGGCAGGTGTACTCCCTTCTTGTGTATCGGGGCCCCGGC
GCTGTGCCCGACATCAAGCAAGAGCTCGCAGAACTTCTCAAGACCGATGG
CTTCTCCTCTGTCGAGGAGGCCGTTGGCGCTGACCACAGGCCTCCCAGAA
AATCCCTCCGAAAGTAGGCTGATGATCTCACGGTGTCATGATCATGCGTG
AGCTCAGGCAGCAATACGGTAGCCGGTCCGAACGATCGGAGAGCTTGGAT
GGCTGGGGGGTCGACAAGCCGATTTCGGGTTCTCATGCGCGGTTGGTTTC
CTCGCTTCTGCTTTCAAGGCCGTACAGATAATCTTGCAGTCGGAGCATGA
TCAAATGCGTTTCGCGCTGTTGGTATGAGTCAAGTTCGACAACGATCAGG
TGCTCTCTTCCCTTTTCTACGATATACGTGTGTTCTGGTTGCTACTTTGG
TCGCGTGTATTTTCTGCAGCACTCTTGTGCATTTAATGTCTTTATTTGTT
GCATCATTTGTCTGTACCTGAAATCTGAGTCCGTGATACAGCACGGCAAG
GAACGCTACGAATCTCTACACCGACAAAATACAGCTGTCGGGTGGAAAAA
AAAACACCCTTTTTCGCCCGCTGCGCAATTCAATACGTGGTGTGCCCGTT
TCCCGGGGTGTATGGTTTTGTCGACTTCGGACAGTTGAAGCGCGAAACAT
CTGCTGTGTGTGGCCGTTGGGCGAAGTCCGCTTCTGTTCGGTGTGACTAT
TATATGTCATTGATCATTGCCATCGAGGAGTACAGAGTGCGCAAATAAAC
GCAGAGGGGATGGTGCGCGTAGATGCTCGCATGCGCAGTGCACGCGATGC
GAGGGCTGGCTCTCAACTATTGTGTCTACTTAAAATGTTGGTGGGTTTAG
TAGGCGGCACGTTTTTTTTCTGACTGAGCACCTTCCCATGTAAGGGAAGG
TCAACTTTGTAGAAAAGGTCAAAATGTATCATAGCAACAAGCTCAAAAGT
GTTTTGGGTGTTTTGAGGGTTGCATATATCGTACAGTAGTATTCTCGTTA
GTTTCAGTAAAAAGTCGAGCTCATCCGAGGGCCGCGCGTTTGGTTTGAAG
TGGGTAGACTTTGGTGACGGTAAAAACTTAATCGTTGCCGGGGGTGCCTC
GGAAGGCATCGCCACGTTTTCCTTGGATGTATGATGTGCAACTCGGGGCA
CCGCCGGTGCCCAGCACGTGAAACGAGAGCGACCGAGCAGTTCGTGTGTT
GCCGCCGTTGTATTTTTGATTTTTTCCTTTCGACACTTAACTTGAAGAGC
TATCATATTCATATAGACAGAATACATGATGCGTTCGTCTATCTTCCTCT
CTTAGTGGCCTTTCGTATGCAAGGGATCAGGGGATAGCTGCAGAGCTTTC
CACTATCTTTTGGGCCAAGAGCAGTGTAGGTCGTGAGTCCAAAAATACCG
GTGAACTGTTTTTTTTTTCAGGCTGTTTCTTACGGTCAACGTTATTTCAT
TTTGGTCTTTTACGTTATTTTGTTATTTTGGTCTGGCGTTTTGACCCCCC
TATGAATCAAATCGGACCAGAGAACCCCATACCCCCCCCACCCGCAAATA
GCCCTGTGTCGGACACATCATGCAACGGCACCAACCAAAACTCGACCTCT
GGGACACAGATGCCGATCAAACCTGATGGAGCGTGTGCTACGACGAAGTA
CGTATTAAATGTTCTAAAAAAAAAAGGCCACACAACAGGAAGTAAGTGTG
GTGGCAGTGGGTTCGGGCTGTTGTGGCGAGATTTTGGTGGAGTTGTGGGT
TGGAGTTGGAAAAAGAGACGAAACAAAAAATGACGAGACTCGGACAGCGG
TATTTTTTCATCAGATTTTTCCACCTCAGCCCACACCGCCGCCGACGCCT
CGCCACAGCCAAAGCCCACACCCACCATATGTCCTGTGGCAAACATGGAG
CGCACCCTCCATCACTTTTTGTCTCGATTGGTGTCCCAGGGATCGAGTTC
TGCTTGGTGCTGTCTCTCCTGCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1164:3470..14642-

>mRNA_P-littoralis_Contig1164.1.1 ID=mRNA_P-littoralis_Contig1164.1.1|Name=mRNA_P-littoralis_Contig1164.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1416bp|location=Sequence derived from alignment at P-littoralis_Contig1164:3470..14642- (Pylaiella littoralis U1_48)
ATGATGAGCTCGGTCGTAGGTAAGGGCATCCGCTCGCCACCCGCTTGGCG
CGTTGCAGCCAACGCGAGGGCACGCGTTGCTGCTGCGGGACGTCCGGCGG
GAAGGAAATCAAGCAGTAGCTCGACAACAGCAGCAGGAGAGACACCGGCT
GCAGCAGGGGGAGTCGCCGGGCCCTCTCAGCAGGCAAAGGGGGGCAGGTC
TCGGAGCGGAGGGCTATACAAGGCGTTATTCCTCACCGGGACGGGGTTTG
CAGCGGGAGTGGCGTACGGCCACCTCCGTCCGGACAAGGCCCGCTTCGCC
TACGCGACGCTGTGTGACTCTGTGGCGATGCCGCTGCTGCGATTGCTGGA
CTCGGAGGAGGCGCACACTGTTGCGATCAAGGCGGCCTCGTTCGGCCTCG
CGCCCAAGGATTGGACCATGGATGACCCCGTCCTCGCGACCACCGTGCTG
GGGCTGCGGTTTTCCAACCCGGTCGGACTGGCGGCGGGTTTCGACAAGCA
TTCGGAGGCCGTGGATGGCCTGATGGACACCGGGTTCGGCTTCGTGGAGA
TCGGGAGCGTTACCCCCGAGCCTCAAGAGGGCAACCCCAAGCCGAGGATG
TTCAGGCTAGTGGAGGATGAGGGCGTCATCAACCGCTGCGGCTTCAACAG
CGACGGCTTGAGGGCGGTGCAGCAGCGCCTGAAGAATCGCCAGACTTCCC
CGATGAACAACCGTGCCGGCTTGCTTGGCGTCAACTTGGGGAAAAACAAG
CTATCGGAGGACGCCTCTGCCGACTTCTGCAAGGGCATCCGGACGCTCGG
CTGCTACGCGGATTACTTGGTGGTGAACGTGTCATCTCCCAACACGCCGG
GGCTGCGCGACTATCAGCGCGTGAAGGCCATCCAGGCCGTAATTATTTCG
GCAATGGATGCTAGAGATCAGGTCCGCGAGTCCACCGGCAACCCGAAGCC
TCTGCCGCTGCTGGTGAAGATCGCCCCGGACCTCACGGAAAAAGAGAAGA
AGGAGATTGCCGGCGTCGTCCTGTCCACCAAGGTGGACGGCCTCATCGTT
TCGAACACGACGATATCTCGGCCGTCGCACCTCAGGAGCGAGAACAAGGA
CGAGGGCGGCGGACTCAGCGGACGCCCTTTGACGAAGCTGGCCACCGAGA
CGATTCGGGACATGTATCGCCTCACCAAAGGAAAGGTTCCTCTCATCGGT
GTGGGCGGAGTGGGAACGGGGCAGCAGGCCTACGACAAAATTCGCGCGGG
AGCCTCCCTCGTACAGGTGTACTCCCTTCTTGTGTATCGGGGCCCCGGCG
CTGTGCCCGACATCAAGCAAGAGCTCGCAGAACTTCTCAAGACCGATGGC
TTCTCCTCTGTCGAGGAGGCCGTTGGCGCTGACCACAGGCCTCCCAGAAA
ATCCCTCCGAAAGTAG
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