mRNA_P-littoralis_Contig635.41.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig635.41.3
Unique NamemRNA_P-littoralis_Contig635.41.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 5.020e-93
Identity = 188/458 (41.05%), Postives = 249/458 (54.37%), Query Frame = 1
Query:   73 DGNPVGRRGARKVFGIDPKLVRDW---ETQEGELVAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAA-VTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKL-------------------------------RSELLAVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSG--------------------RTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            DG PVG  GA KV  +  K + +W   E Q  E V+ + K S  KQ  +H G +  T  AE      ++      A  +    VM KLL   P   GG+P+   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL                                 +L +V+ ++FE + NMDQ P+Q E P ETT++KTGAK  RISTGG  EK R+T+VL V  DG+KV PRII++G     P  SG                    R   G+P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH +E F   L+  A T V+ + GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  I+ +T+ +C K+CGLTL LDGSEDHA
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQ--VHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGK-LKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 2.530e-92
Identity = 199/493 (40.37%), Postives = 261/493 (52.94%), Query Frame = 1
Query:    7 GRSAYENVQKLEVLKYSRSKC-ADGNPVGRRGARKVFGIDPKLVRDWETQEGEL---VAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRS-------------------------------ELLAVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSGRTSFGYP----------------------------PAGISLGVQ-----KSSWCDGTQPDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            G+ +Y    KL    Y+R  C  DG PVG  GA  V  +  K + +W  QE +L   V+ + K S  KQ  +H G ++ T  AE A+VD +N  RK         VM KLL   P   GG+ +   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR                                +L +V+ ++FE L NMDQTP+Q E P ETT+EKTGAK  RISTGGE EK R+T+VL V  DG+KV PRII+KG     P  SG+     P                            P  I  G       + SW D  + + W+   +  RP + S   QRP +LVLDDF CH++E F   L+  AKT V+ + GGLT + QPLDR +NK+ KR  R KYT          RSGK ++ P  G+V+TW KE W  I+++T+ +CFK+CGLTL LDGSE HA
Sbjct:   79 GKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQ--VHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGK-LNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHA 566          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 5.890e-92
Identity = 192/462 (41.56%), Postives = 252/462 (54.55%), Query Frame = 1
Query:   85 VGRRGARKV-FGIDPKLVRDWETQEGEL---VAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELL-------------------------------AVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSG--------------------RTSFGYPPAGISLGVQKSSW-----CDGTQPDDWV---TQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            VG +G+  +   +  K + +W  QEG+L   V+ + K S  KQ  +H G ++ T  AE A+VD IN  RK         VM KLL   P   GG+P+   PE+    +  +N+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR  L+                               +V+ ++FE L NMDQTP+Q E P ETT+E TG K  RISTGG+ EK R+T+VL V  DG+ V P II+KG     P  SG                    R   G+P  G+S GVQ+ SW     C+G  P  W        M RP + S   QRP +LVLDDF CH++E F   L   A T V+ + GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  ++++T+ +CFK+CGLTL LDGSEDHA
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQ--VHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGK-LKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA 534          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 4.720e-90
Identity = 187/476 (39.29%), Postives = 252/476 (52.94%), Query Frame = 1
Query:   10 RSAYENVQKLEVLKYSRSKCADGNPVGRRGARKVFGIDPKLVRDWETQEGELVAFSK-KQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELL-------------------------------AVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGP-------------------------LSSGRTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPG-SSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            + +Y    KL+ + ++R  C DG PVG  GA KV  +D + +  W  +E  +    K K    K +S+H G    T + E  + D IN  R+         VM KLL   P   GG+ +A   E+    R  +  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR+ LL                               +V  ++FE L NMDQTP+Q E P ETT+EK GAK  RISTGG+ EK R+T+ L V  DG KV  RII+KG                          L + +T+FGYP +G+S GVQ+ SW D  +   W+++ +  RP   S   QR S+LVLDDF              +  T V+++ GGLTP+ QPLDR ++KE KR  R +YT ++       ++GK +  P RGLV+TW KE WA I+A+T+  CFKVCGLTL LDGSED A
Sbjct:   72 KGSYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGK-LQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDA 531          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.240e-86
Identity = 165/374 (44.12%), Postives = 214/374 (57.22%), Query Frame = 1
Query:  313 MAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRS-------------------------------ELLAVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSG--------------------RTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            M KLL   P   GG+P+   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR                                +L +V+ ++FE L NMDQTP+Q E P ETT+EKTGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KG     P  SG                    R   G+P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH++E F   L+  A T V+ + G LTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W   + +T+ +CF +CGLTL LDGSEDHA
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGK-LKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHA 372          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.680e-82
Identity = 180/462 (38.96%), Postives = 241/462 (52.16%), Query Frame = 1
Query:   34 KLEVLKYSRSKCADGNPVGRRGARKVFGIDPKLVRDWETQEGELVA-FSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELLA-------------------------------VQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGP-------------------------LSSGRTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRP--GSSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWI----RDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTL 1230
            KL+V+ ++R  C DG P G  GA KV  +  + + +W   E  L A  S      K + +H   ++     E A+V+ IN  RK+         M KLL   P   GG+ +   PE+   +   + +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR  LL                                V  ++FE L NMDQTP+Q E P ETT+E TGAK  RI+TGG+ EK R+T+ L V  DG+KV  RII+KG                          L + R+  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF CH+++ F   L+ +A T V+ + GGL P+ QPLDR +NK+ KR  R  YT       RD   ++GK V  P RG VATW K  WA I+ + + +CFK+CGLTL
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTGKLVP-PGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.990e-81
Identity = 164/403 (40.69%), Postives = 215/403 (53.35%), Query Frame = 1
Query:  313 MAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRS-------------------------------ELLAVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSG--------------------RTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILS-----------------------------CFKVCGLTLNLDGSEDHA 1257
            M KLL   P   GG+ +   P +    +   N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR                                +L +V+ ++F+ L NMDQTP+Q E P ETT+EKTGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KG     P  SG                    R    +P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH++E +   L+  A T V+++ GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  I+ +T+ S                             CFK+CGLTL LDGSEDHA
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGK-LKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHA 401          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 5.760e-74
Identity = 184/516 (35.66%), Postives = 242/516 (46.90%), Query Frame = 1
Query:   34 KLEVLKYSRSKCADGNPVGRRGARKVFGIDPKLVRDWETQEGELVAFSK-KQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELL-------------------------------AVQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSGR--------------------TSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPG-SSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKY------------------------------------------------TIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            KL   +++R  C DG PVG  GA KV G+D + V  W  +E  +    K K    K +S+H G    T + E  + D IN                    ++   AG + +          R  +  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR+ LL                               +V  K+FE L NMDQTP+Q E P ETT+EK G K  RISTGG+ EK R+T  L V  DG KV  RII+KG     P ++GR                    T FGYP +G+   VQ+ SWCD  +   W+++ +  RP   S   QR S+LVLDDF CHR E F + L+ +  T V+++ GGLTP+ QPLDR +NKE KR  R                                                   T ++       ++GK +  P RGLV+T  KE WA I+ +T+  CFKVCGLTL LDGSED A
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCINE-------------------QLAASAGEILA---------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGK-LQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDA 489          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 2.530e-71
Identity = 179/521 (34.36%), Postives = 243/521 (46.64%), Query Frame = 1
Query:    7 GRSAYENVQKLEVLKYSRSKCA-DGNPVGRRGARKVFGIDPKLVRDWETQEGEL---VAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELLAVQRKIFELLYNM--DQTPIQAETPSETTVEKTGAKHVRISTG------------------------GEAEKLRYTVVLTVRGDGQKVLPRIIYKG-----PLSSG--------------------RTSFGYPPAGISLGVQKSSW-----CDGTQP-----------------------------------------DDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            G+ +Y    KL    Y+R  C  DG PVG  GA K+  +  K + +W  QE +L   V+ + K S  KQ  +  G ++ T   E A+VD IN  RK         V +KLL   P   GG+P+   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G+EG AW  + KLR  L+    +I+        D++PI+ E  +   +    A+  R S                            A++ R   VL V  DG+KV PRII+KG     P  SG                    R   G+P  G+S GVQ+ SW     C+G +                                          + W +     RP + S   QRP +LVLDDF CH++E F   L     T V+ + GGLTP+  PLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  I+ +T+ +CFK+CGLTL LDGSEDHA
Sbjct:   32 GKGSYPIRFKLNAAVYTREICPYDGQPVGNNGAAKLLQVPGKRIIEWLKQEEQLREKVSANPKLSKAKQ--VQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTVMKLRETLVKRAGEIYARRQPPAPDESPIKGEDLTSEQLVSVEAEDSRNSATWIRRQSSTRCRWRPLWRRPVRRMLASAQEER---VLAVMADGKKVSPRIIFKGMPFIPPTVSGKGESILPRTNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGARASWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVVSTWCKEAWESTPETXRPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGK-LKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHA 546          
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 8.170e-71
Identity = 163/469 (34.75%), Postives = 222/469 (47.33%), Query Frame = 1
Query:   34 KLEVLKYSRSKCADGNPVGRRGARKVFGIDPKLVRDWETQEGELVA-FSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSELLA-------------------------------VQRKIFELLYNMDQTPIQAETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGP-------------------------LSSGRTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRP--GSSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINKEFKR--GFRAKYTIWIRDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSEDHA 1257
            KL+ + ++R  C DG PVG  GA KV  +  + + +W   E  L A  S      K + +H G ++ T   E A+V+ IN  RK+       L                            +  + +WY RF KR++F+IRR+TSVGQK P+G EG AWA + KLR  LL                                V  ++FE L NMDQTP+Q E  +                 G  EK R+T+ L V  DG+KV  RII+KG                          L + R+  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF CH+++ F   L+ +A T V+ + GGLTP+ Q LDR +NK+ KR                 ++GK ++ P RG VATW K  WA I+ +T+ +CFK+CGLTL LDGSEDHA
Sbjct:   74 KLKAVAFTRVVCEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCEEALA--------------------------FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDA-----------------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGK-LAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 497          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig635.41.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHT8_9PHAE5.020e-9341.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE2.530e-9240.37DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE5.890e-9241.56DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE4.720e-9039.29DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.240e-8644.12DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.680e-8238.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE2.990e-8140.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE5.760e-7435.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JN68_9PHAE2.530e-7134.36DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE8.170e-7134.75DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig635contigP-littoralis_Contig635:83520..85453 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7668.SPU_015022-tr
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1257
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue2e-44
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38I47@33154|Opisthokonta,3BMCH@33208|Metazoa,3CYY1@33213|Bilateria
Descriptionpogo transposable element with KRAB domain
Cds size1257
COG categoryBD
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791324.5892591-CDS-P-littoralis_Contig635:83519..840111680791324.5892591-CDS-P-littoralis_Contig635:83519..84011Pylaiella littoralis U1_48CDSP-littoralis_Contig635 83520..84011 -
1680791324.6063213-CDS-P-littoralis_Contig635:84082..841751680791324.6063213-CDS-P-littoralis_Contig635:84082..84175Pylaiella littoralis U1_48CDSP-littoralis_Contig635 84083..84175 -
1680791324.6162434-CDS-P-littoralis_Contig635:84670..848111680791324.6162434-CDS-P-littoralis_Contig635:84670..84811Pylaiella littoralis U1_48CDSP-littoralis_Contig635 84671..84811 -
1680791324.6312501-CDS-P-littoralis_Contig635:84922..854531680791324.6312501-CDS-P-littoralis_Contig635:84922..85453Pylaiella littoralis U1_48CDSP-littoralis_Contig635 84923..85453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig635.41.3prot_P-littoralis_Contig635.41.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig635 83520..85453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig635.41.3

>prot_P-littoralis_Contig635.41.3 ID=prot_P-littoralis_Contig635.41.3|Name=mRNA_P-littoralis_Contig635.41.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=419bp
KSGRSAYENVQKLEVLKYSRSKCADGNPVGRRGARKVFGIDPKLVRDWET
QEGELVAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVT
RDLVMAKLLAEMPTFAGGVPSADDPEKMEKIRRLYNAWYYRFLKRHRFSI
RRKTSVGQKKPEGWEGKAWAFIQKLRSELLAVQRKIFELLYNMDQTPIQA
ETPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKG
PLSSGRTSFGYPPAGISLGVQKSSWCDGTQPDDWVTQDFMRRPGSSPRDQ
RPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRKINK
EFKRGFRAKYTIWIRDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTIL
SCFKVCGLTLNLDGSEDHA
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mRNA from alignment at P-littoralis_Contig635:83520..85453-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig635.41.3 ID=mRNA_P-littoralis_Contig635.41.3|Name=mRNA_P-littoralis_Contig635.41.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1934bp|location=Sequence derived from alignment at P-littoralis_Contig635:83520..85453- (Pylaiella littoralis U1_48)
AAGAGCGGGCGCAGCGCATACGAGAACGTGCAGAAGCTGGAGGTGCTGAA GTACAGCCGGAGCAAGTGTGCCGATGGGAACCCAGTCGGAAGGCGTGGTG CTAGGAAGGTGTTCGGCATCGACCCGAAGCTCGTCCGGGATTGGGAGACC CAGGAGGGGGAGCTTGTGGCGTTTTCCAAGAAGCAGAGCGCAGGCAAGCA GCGGTCGTTGCACCCTGGACGCGAGTCTGACACACAGAAGGCGGAGGCGG CGGTGGTGGACGAGATCAACACCCTCAGGAAGAACGGTGCTGCTGTGACC CGGGACCTTGTCATGGCCAAGCTACTCGCCGAGATGCCAACCTTTGCAGG GGGCGTGCCGTCCGCAGACGATCCCGAGAAGATGGAAAAAATTCGGAGGC TTTACAACGCCTGGTACTACAGGTTCCTCAAGCGGCACCGGTTCTCGATC CGACGCAAGACAAGCGTGGGGCAGAAGAAACCGGAAGGATGGGAGGGCAA GGCGTGGGCGTTCATCCAGAAGCTTCGCTCGGTGCTAGTTCGGCACGCGG AGGAAGCCGTTATCGTGGAGAGGGCAGCCCAGGCAGCGAAGAACGGAGGG ACCGTTGAGATCGAGATCGAAGGCAGCCCGCCGACTGCGGAGGAACTTCT GGCCGTTCAGCGCAAGATCTTCGAGCTGCTCTACAACATGGACCAGACCC CGATCCAGGCTGAAACGCCTTCGGAGACCACGGTGGAGAAGACTGGTGCG AAGCACGTCCGTATCTCGACAGGCGGTGAGGCGGTGTGCTGTGTTGAGTT CAAACCCAAGACGGTTGAGATTTTGATATTTCTCTGGCAAATATCAAATA TGCCGACAGTGGAAATACGGGGAATTAGGATTTTGTGCATGGCTTCTGCC GTCACGCTCGTCATCGTTCCGCGCACACCCGTTTTGCGTTCTTCTTTTTA CCTATGTACAGGTGCTGCGGTAAAGAGCATCGATCCTACACTTTTTCTGA TTGTGTCTCGTTCGTTTATCCGACTTGCGCTTTGTTTTCTTTTATCAGCG ATTTATATAGTTAATTATGTACTTCGAAGTATACGCTTATCGGTACCTAC GGATACCTATTTATATGTGTGGTGTTTTTTTATTATATTTTTGATGTGGT TTTTGCTGCAGTGAAAATGTACCTTACCGGTATGTTGTTCCTCTCGTTAT TTTATTAACGGGGTATTATTTTTTTAACTCAATTTTCGTTGTTTACATGC CTAAATCACTATTTTCACACCAGGCAAGGAGAAGCTGCGGTACACCGTTG TGCTAACCGTCAGGGGTGATGGGCAGAAGGTGCTGCCGCGCATCATCTAC AAGGGACCCCTTTCGTCGGGGGTACCAACAAGTCGGGCTCGTCCAAGAAG CCGGGCAAGAACAGCCTGTCGTACGAGCACCTCCCAGACAAGCGGACGTC CTTCGGCTACCCTCCTGCCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGT GGTGCGACGGCACTCAGCCGGACGACTGGGTAACCCAGGACTTCATGCGC CGACCAGGTTCTAGCCCCCGAGACCAGCGTCCCAGCGTTCTCGTGCTCGA CGACTTCAGTTGCCACCGGGAAGAGAAGTTCCAACAGAAGCTGCAGAGTA AGGCGAAGACGCAGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGC CAGCCGCTCGACCGGAAAATCAACAAGGAGTTCAAGCGAGGCTTTCGGGC CAAGTACACCATCTGGATCCGGGACAACTTCGGGCGCTCGGGGAAGAAGG TGTCCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGG GCCGGCATCTCGGCGCAGACCATCCTCTCGTGCTTCAAGGTCTGCGGTCT CACCCTCAACCTCGACGGCAGCGAGGACCATGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig635:83520..85453-

>mRNA_P-littoralis_Contig635.41.3 ID=mRNA_P-littoralis_Contig635.41.3|Name=mRNA_P-littoralis_Contig635.41.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig635:83520..85453- (Pylaiella littoralis U1_48)
AAGAGCGGGCGCAGCGCATACGAGAACGTGCAGAAGCTGGAGGTGCTGAA
GTACAGCCGGAGCAAGTGTGCCGATGGGAACCCAGTCGGAAGGCGTGGTG
CTAGGAAGGTGTTCGGCATCGACCCGAAGCTCGTCCGGGATTGGGAGACC
CAGGAGGGGGAGCTTGTGGCGTTTTCCAAGAAGCAGAGCGCAGGCAAGCA
GCGGTCGTTGCACCCTGGACGCGAGTCTGACACACAGAAGGCGGAGGCGG
CGGTGGTGGACGAGATCAACACCCTCAGGAAGAACGGTGCTGCTGTGACC
CGGGACCTTGTCATGGCCAAGCTACTCGCCGAGATGCCAACCTTTGCAGG
GGGCGTGCCGTCCGCAGACGATCCCGAGAAGATGGAAAAAATTCGGAGGC
TTTACAACGCCTGGTACTACAGGTTCCTCAAGCGGCACCGGTTCTCGATC
CGACGCAAGACAAGCGTGGGGCAGAAGAAACCGGAAGGATGGGAGGGCAA
GGCGTGGGCGTTCATCCAGAAGCTTCGCTCGGAACTTCTGGCCGTTCAGC
GCAAGATCTTCGAGCTGCTCTACAACATGGACCAGACCCCGATCCAGGCT
GAAACGCCTTCGGAGACCACGGTGGAGAAGACTGGTGCGAAGCACGTCCG
TATCTCGACAGGCGGTGAGGCGGAGAAGCTGCGGTACACCGTTGTGCTAA
CCGTCAGGGGTGATGGGCAGAAGGTGCTGCCGCGCATCATCTACAAGGGA
CCCCTTTCGTCGGGGCGGACGTCCTTCGGCTACCCTCCTGCCGGCATCAG
CCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACTCAGCCGGACGACT
GGGTAACCCAGGACTTCATGCGCCGACCAGGTTCTAGCCCCCGAGACCAG
CGTCCCAGCGTTCTCGTGCTCGACGACTTCAGTTGCCACCGGGAAGAGAA
GTTCCAACAGAAGCTGCAGAGTAAGGCGAAGACGCAGGTGGTGATGCTTG
GTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAAAATCAACAAG
GAGTTCAAGCGAGGCTTTCGGGCCAAGTACACCATCTGGATCCGGGACAA
CTTCGGGCGCTCGGGGAAGAAGGTGTCCGCGCCGAGCAGGGGGCTGGTCG
CGACGTGGGTAAAGGAGGTGTGGGCCGGCATCTCGGCGCAGACCATCCTC
TCGTGCTTCAAGGTCTGCGGTCTCACCCTCAACCTCGACGGCAGCGAGGA
CCATGCG
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