prot_P-littoralis_Contig634.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig634.13.1
Unique Nameprot_P-littoralis_Contig634.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length285
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig634.13.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.100e-104
Identity = 163/240 (67.92%), Postives = 196/240 (81.67%), Query Frame = 0 
Query:    1 MDVCIRVGSLCLRHWLNVVGVAVGAYFLIEMFAKILAWFFKWTQLLHTNNMVWIFIKLHKDVSLLVWSAMLVFLWSWLKTTEWGFDDDGVVGQILGCYMAYTAVNLVKEVCKVEMALQYMWKPYLERARTSIWSQYVTFVMTDYAMGLQTKDAEGQALALGFTNAKKRGKDNLSLYTMGKAIGFVHANALRHPLGPGRPGTDRYGMVDKKNGARLFGGLLFDALMIYFHEEDLKKKVGSP 240
            +D  + +G   LR WLN + V+VGAYF+IE+ AK +A FFKWT+LLHTNN VWIFIKLHK+VSLL+WS ++  LW+W + T+   +D+GV+ +ILG ++AYTA N+V EVCKVEMA +YMWKPYLERAR SIWSQYV F+MTD+AMGLQTKD EGQALALGFT  K  G ++LSLYT+GKAIGFVHANALRHPLGPGRPGTDR GM+D K GARLFG LLFDALM+ F+ EDL K +  P
Sbjct:  296 LDKRVELGHFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSLLIWSTIIYLLWTWFEGTDLAPEDNGVIAKILGVFLAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKN-GDEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGELLFDALMVQFNGEDLNKLLPVP 534
[Close]
BLAST of mRNA_P-littoralis_Contig634.13.1 vs. uniprot
Match: D7FT72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT72_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 2.700e-104
Identity = 158/240 (65.83%), Postives = 193/240 (80.42%), Query Frame = 0 
Query:    1 MDVCIRVGSLCLRHWLNVVGVAVGAYFLIEMFAKILAWFFKWTQLLHTNNMVWIFIKLHKDVSLLVWSAMLVFLWSWLKTTEWGFDDDGVVGQILGCYMAYTAVNLVKEVCKVEMALQYMWKPYLERARTSIWSQYVTFVMTDYAMGLQTKDAEGQALALGFTNAKKRGKDNLSLYTMGKAIGFVHANALRHPLGPGRPGTDRYGMVDKKNGARLFGGLLFDALMIYFHEEDLKKKVGSP 240
            +D  + +G   LR WLN + V+VGAYF+IE+ AK +A FFKWT+LLHTNN VWIFIKLHK+VS+L+WS ++  LW+W +  +   +D+GV+ +ILG ++AYTA N+V EVCKVEMA +YMWKPYLERAR SIWSQYV F+MTD+AMGLQTKD EGQALALGF   ++R +  LSLYT+GKAIGFVHANALRHPLGPGRPGTDR GM+D K GARLFG LLFDALM+ F+ EDL   +  P
Sbjct:  149 LDERVELGHFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEGADLAPEDNGVIAKILGVFVAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFHQDQERRR--LSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGELLFDALMVQFNGEDLSMLLPVP 386
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig634.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSR3_9PHAE1.100e-10467.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT72_ECTSI2.700e-10465.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig634contigP-littoralis_Contig634:42430..49942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig634.13.1mRNA_P-littoralis_Contig634.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig634 41393..51477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig634.13.1 ID=prot_P-littoralis_Contig634.13.1|Name=mRNA_P-littoralis_Contig634.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp
MDVCIRVGSLCLRHWLNVVGVAVGAYFLIEMFAKILAWFFKWTQLLHTNN
MVWIFIKLHKDVSLLVWSAMLVFLWSWLKTTEWGFDDDGVVGQILGCYMA
YTAVNLVKEVCKVEMALQYMWKPYLERARTSIWSQYVTFVMTDYAMGLQT
KDAEGQALALGFTNAKKRGKDNLSLYTMGKAIGFVHANALRHPLGPGRPG
TDRYGMVDKKNGARLFGGLLFDALMIYFHEEDLKKKVGSPRGFYFNAAAT
TSAQKAAAGNENIATNPTTPAEGGRGGGTSREKE*
back to top