prot_P-littoralis_Contig634.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig634.9.1
Unique Nameprot_P-littoralis_Contig634.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length106
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A6H5JSZ0_9PHAE (Cytochrome c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSZ0_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 4.860e-56
Identity = 87/102 (85.29%), Postives = 92/102 (90.20%), Query Frame = 0 
Query:    3 STKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            STK GAKIFKTKCSQCHTVEKDAGHKQGPNL+GLFGR AGT + YSYSTANKTSGV W E +LFDYLLAPKKYIKGTKMVFAGIKK  +RK LIAYLKEAT+
Sbjct:    2 STKLGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRAAGTVDGYSYSTANKTSGVVWTESTLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 103
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A835YXF9_9STRA (Cytochrome c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.340e-53
Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:    3 STKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATSD 105
            S + GAKIFKTKCSQCH VEK AGH+QGPNLHGLFGRTAGT E YSYSTANK+SGV W + +LF+YLL PKKYIKGTKMVFAGIKKAD+R+ LIAYLK ATSD
Sbjct:    2 SAEKGAKIFKTKCSQCHVVEKGAGHRQGPNLHGLFGRTAGTTEGYSYSTANKSSGVVWGDDTLFEYLLNPKKYIKGTKMVFAGIKKADERQDLIAYLKSATSD 104
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A4D9D2B8_9STRA (Cytochrome c domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2B8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.700e-49
Identity = 78/102 (76.47%), Postives = 87/102 (85.29%), Query Frame = 0 
Query:    3 STKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            S + GAKIFKTKCSQCHTVEK   HKQGPNL+GLFGR +G AENYSYSTANK SG+ W E +LF+YLLAPK YIKGTKMVFAGIK A DRK LIAYLK++T+
Sbjct:    2 SAEKGAKIFKTKCSQCHTVEKGGAHKQGPNLNGLFGRQSGQAENYSYSTANKNSGIIWGEDTLFEYLLAPKNYIKGTKMVFAGIKSAKDRKDLIAYLKDSTA 103
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: CYC_WHEAT (Cytochrome c n=9 Tax=Pooideae TaxID=147368 RepID=CYC_WHEAT)

HSP 1 Score: 154 bits (389), Expect = 1.240e-46
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:    6 AGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            AGAKIFKTKC+QCHTV+  AGHKQGPNLHGLFGR +GT   YSYS ANK   V+WEE +L+DYLL PKKYI GTKMVF G+KK  DR  LIAYLK+ATS
Sbjct:   13 AGAKIFKTKCAQCHTVDAGAGHKQGPNLHGLFGRQSGTTAGYSYSAANKNKAVEWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKKATS 111
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A7S2SEC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEC8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.670e-46
Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    3 STKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            ST  GAKIFKTKCSQCHTVE    HKQGPNL+GLFGR +G A  Y+YS ANK SG+ W + +LFDYLLAPKKYIKGTKMVFAGIKK  +RK LIAYLKE+T+
Sbjct:   13 STAKGAKIFKTKCSQCHTVEAGGAHKQGPNLNGLFGRQSGLAAGYTYSDANKNSGIIWGDDTLFDYLLAPKKYIKGTKMVFAGIKKPAERKDLIAYLKESTA 114
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A7S3ZRJ7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRJ7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 7.050e-46
Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 0 
Query:    7 GAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEA 102
            GAKIFKTKCSQCHTVE    HKQGPNLHG+FGR +G A  YS+S ANK SG+ W E +LFDYLLAPKKYIKGTKMVFAGIKK  +RK LIAYLK+A
Sbjct:   37 GAKIFKTKCSQCHTVESGGAHKQGPNLHGIFGRQSGQATGYSFSDANKNSGIIWGEDTLFDYLLAPKKYIKGTKMVFAGIKKPKERKELIAYLKDA 132
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: CYC_ORYSI (Cytochrome c n=62 Tax=Mesangiospermae TaxID=1437183 RepID=CYC_ORYSI)

HSP 1 Score: 152 bits (384), Expect = 7.180e-46
Identity = 73/100 (73.00%), Postives = 82/100 (82.00%), Query Frame = 0 
Query:    5 KAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            KAG KIFKTKC+QCHTV+K AGHKQGPNL+GLFGR +GT   YSYSTANK   V WEE +L+DYLL PKKYI GTKMVF G+KK  +R  LI+YLKEATS
Sbjct:   13 KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLISYLKEATS 112
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: CYC_FRIAG (Cytochrome c n=9 Tax=Spermatophyta TaxID=58024 RepID=CYC_FRIAG)

HSP 1 Score: 152 bits (384), Expect = 7.400e-46
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0 
Query:    5 KAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            K+G KIFKTKC+QCHTV+K AGHKQGPNL+GLFGR +GT   YSYS ANK   V W+E +L+DYLL PKKYI GTKMVF G+KK  DR  LIAYLKEATS
Sbjct:   13 KSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVNWDENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATS 112
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A7S0C4I9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C4I9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.640e-46
Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 0 
Query:    5 KAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            K GAK+FKTKCSQCHTVE    HKQGPNLHG +G+T+G A+ YSY+ ANK SGV WE+ +LFDYL  PKKYIKGTKMVFAG+KKAD+R+ +IA+LK++TS
Sbjct:   15 KKGAKVFKTKCSQCHTVEAGGAHKQGPNLHGFWGKTSGQADGYSYTAANKESGVTWEDKTLFDYLENPKKYIKGTKMVFAGMKKADERQNIIAFLKKSTS 114
[Close]
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Match: A0A7S1YBK6_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YBK6_9EUKA)

HSP 1 Score: 151 bits (382), Expect = 1.100e-45
Identity = 73/102 (71.57%), Postives = 82/102 (80.39%), Query Frame = 0 
Query:    3 STKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYSTANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLKEATS 104
            S + GAKIFKTKCSQCHTVE    HKQGPNL+GL GRT+G A  Y+YS ANK SG+ W E +LF+YLLAPKKYI GTKMVFAG+KK  DRK LIAYLK AT+
Sbjct:    2 SAEKGAKIFKTKCSQCHTVEAGGSHKQGPNLNGLLGRTSGQAAGYAYSDANKNSGITWSEDTLFEYLLAPKKYIPGTKMVFAGLKKEKDRKDLIAYLKSATA 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig634.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSZ0_9PHAE4.860e-5685.29Cytochrome c domain-containing protein n=2 Tax=Ect... [more]
A0A835YXF9_9STRA1.340e-5380.58Cytochrome c n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A4D9D2B8_9STRA1.700e-4976.47Cytochrome c domain-containing protein n=1 Tax=Nan... [more]
CYC_WHEAT1.240e-4673.74Cytochrome c n=9 Tax=Pooideae TaxID=147368 RepID=C... [more]
A0A7S2SEC8_9STRA2.670e-4673.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZRJ7_9STRA7.050e-4676.04Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
CYC_ORYSI7.180e-4673.00Cytochrome c n=62 Tax=Mesangiospermae TaxID=143718... [more]
CYC_FRIAG7.400e-4672.00Cytochrome c n=9 Tax=Spermatophyta TaxID=58024 Rep... [more]
A0A7S0C4I9_9STRA7.640e-4670.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1YBK6_9EUKA1.100e-4571.57Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 43..53
score: 52.34
coord: 27..42
score: 72.78
coord: 93..101
score: 61.68
coord: 76..86
score: 72.73
coord: 57..73
score: 49.64
coord: 14..21
score: 76.87
IPR002327Cytochrome c, class IA/ IBPANTHERPTHR11961CYTOCHROME Ccoord: 3..104
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 5..101
e-value: 1.9E-10
score: 41.6
IPR009056Cytochrome c-like domainPROSITEPS51007CYTCcoord: 2..103
score: 13.921987
IPR036909Cytochrome c-like domain superfamilyGENE3D1.10.760.10coord: 1..104
e-value: 1.2E-39
score: 137.0
IPR036909Cytochrome c-like domain superfamilySUPERFAMILY46626Cytochrome ccoord: 4..102
NoneNo IPR availablePIRSRPIRSR000025-1PIRSR000025-1coord: 5..36
e-value: 6.9E-4
score: 17.4
NoneNo IPR availablePIRSRPIRSR000008-1PIRSR000008-1coord: 5..34
e-value: 0.0085
score: 13.5
NoneNo IPR availablePIRSRPIRSR000008-2PIRSR000008-2coord: 5..34
e-value: 0.0085
score: 13.5
NoneNo IPR availablePIRSRPIRSR000006-2PIRSR000006-2coord: 4..33
e-value: 7.4E-4
score: 16.8
NoneNo IPR availablePIRSRPIRSR000025-2PIRSR000025-2coord: 5..36
e-value: 6.9E-4
score: 17.4
NoneNo IPR availablePANTHERPTHR11961:SF32CYTOCHROME Ccoord: 3..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig634contigP-littoralis_Contig634:34350..39528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig634.9.1mRNA_P-littoralis_Contig634.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig634 32888..39754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig634.9.1 ID=prot_P-littoralis_Contig634.9.1|Name=mRNA_P-littoralis_Contig634.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp
MSSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLHGLFGRTAGTAENYSYS
TANKTSGVKWEEGSLFDYLLAPKKYIKGTKMVFAGIKKADDRKLLIAYLK
EATSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002327Cyt_c_1A/1B
IPR009056Cyt_c-like_dom
IPR036909Cyt_c-like_dom_sf