mRNA_P-littoralis_Contig633.36.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 504 bits (1298), Expect = 2.820e-170 Identity = 243/249 (97.59%), Postives = 247/249 (99.20%), Query Frame = 1
Query: 4 TIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
TIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEK+EVVEYRGEYIEKRRKMALRQP+WVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCE+FHP NKCRCGKKVHHIGQDESAYKAYA EGKEWVIRGVRGLRK+TEGPGEMVSGFQDERHGFGLPISDADLAAVN
Sbjct: 366 TIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVN 614
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 4.290e-167 Identity = 244/300 (81.33%), Postives = 249/300 (83.00%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAAL--------------------------------------------------GPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
+TI+DVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGC+YERATKSFYTDTHEK+EVVEYRGEYIEKRRKMALRQP+WVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAAL GPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYA EGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN
Sbjct: 30 VTIEDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCKYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALDAARTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 329
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 2.660e-137 Identity = 212/250 (84.80%), Postives = 216/250 (86.40%), Query Frame = 1
Query: 4 TIKDVCKYINGPLLQDDKE-DLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
TIK+VCKYINGPLLQDDKE DLSRLHAYQVNLPVSMST HSWMIRLGCRYER TKSFYTDTHEK+EVVEYRGEYIEKRRKMALRQP+WVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSV FDQAAAAQCEHFH PNKCRCG+KVHHIGQDESAYKA E W SG RHGFGLPISDADLAAVN
Sbjct: 319 TIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVCFDQAAAAQCEHFHLPNKCRCGRKVHHIGQDESAYKA---ENGVWF------------------SG----RHGFGLPISDADLAAVN 543
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 355 bits (912), Expect = 1.560e-112 Identity = 178/269 (66.17%), Postives = 207/269 (76.95%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRG-------------------VRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
LT+KDV YIN L + DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEK++VV YRG+YI+ +RK+AL QP+WVRVQR L +E+ RLD +K GP DF AEVYDC ++G++CIEFHVDLLRD+GSVD FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYA EGKEWV++G VRGLRKKTEGPGEMVS FQDERHGFGLP++D L AVN
Sbjct: 434 LTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIK--GPAEDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVN 700
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 349 bits (895), Expect = 5.510e-112 Identity = 167/227 (73.57%), Postives = 192/227 (84.58%), Query Frame = 1
Query: 70 RLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
RL A VNLPVSM+TTHSWMI LGC+YERATKSFYTD HEK++VV YRG+YI+ +RK+ALRQP+WVRVQR L EE+ RLD +K GP DF AEVYDC ++G++CIEFHVDLLRD+GSVD FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYA EGKEWV++GVRGLRKKTEGPGEMVS FQDERHGFGLP++D L AVN
Sbjct: 447 RLTAKDVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVN 671
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 321 bits (822), Expect = 5.130e-98 Identity = 163/268 (60.82%), Postives = 188/268 (70.15%), Query Frame = 1
Query: 85 QVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDF----------------------------------------------YAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVN 750
+VNLPVSM+TTHSWMI LGC+YERATKSFYTD HEK++VV YRG+YI+ +RK+ALRQP+WVRVQR L EE+ RLD +K GP +F AEVYDC ++G++CIEFHVDLLRD GSVD FD RA LGPEGG YSVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYA EGKEWV++GVRGLRKKTEGPGEMVS FQDERHGFGLP++D L AVN
Sbjct: 373 EVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAEEFGAERGASASSSTSISCGTTAPSIDSTISVLNLXXXXXXXXXXXXXXXAEVYDCVVEGRECIEFHVDLLRDIGSVDRFDARRAKLGPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVN 638
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE) HSP 1 Score: 302 bits (773), Expect = 5.800e-96 Identity = 150/206 (72.82%), Postives = 160/206 (77.67%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGK 618
+T+KDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTH WMIRLGC+YERATKSFYTD+HEK K+EEVDRL+SLK+RGPEG FYAEVYDCKIDGQDCI FH+DLLRDDGSVDNFDKLRAALGPEGGD S RFDQAAAA FHPPNKC CGKKVHHI +DESAYKA+ GK
Sbjct: 276 VTVKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHPWMIRLGCKYERATKSFYTDSHEK--------------------------------KEEEVDRLESLKARGPEGGFYAEVYDCKIDGQDCIAFHLDLLRDDGSVDNFDKLRAALGPEGGDCSFRFDQAAAAPVRAFHPPNKCNCGKKVHHIEEDESAYKAFLEYGK 449
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE) HSP 1 Score: 263 bits (672), Expect = 1.120e-79 Identity = 135/214 (63.08%), Postives = 163/214 (76.17%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVH---HIGQDESAYKAYAHEGKEWVIR 633
LT+KDV YIN L ++ DLSRL +YQVNLPVSM+TTHSWMI LGC+YERATKSFYTD HEK++VV YRG+YI+ +RK+ALRQP+WVRVQR L EE+ RLD +K GP DF AEVYDC ++G++CIEFHVDLLRD+GSVD FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +K H+G Y GK+ V+R
Sbjct: 319 LTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPVKCKCNRKREDGWHMGNMNVNY-----GGKQKVLR 525
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.130e-79 Identity = 133/212 (62.74%), Postives = 160/212 (75.47%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAHEGKEWVIRG 636
LT+KDV YIN L ++ DLSRL +YQVNLPVSM+TTHSW+I LGC K++VV RG+YI+ +RK+ALRQP+WVRVQR L EE+ RLD +K GP DF AEVYDC ++G++CIEFHVDLLRD+GSVD FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +KV HIGQDES YKAYA EGKEWV++G
Sbjct: 392 LTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWIIALGC---------------KKDVVVCRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQG 586
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE) HSP 1 Score: 259 bits (661), Expect = 5.280e-79 Identity = 126/188 (67.02%), Postives = 152/188 (80.85%), Query Frame = 1
Query: 1 LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKEEVVEYRGEYIEKRRKMALRQPMWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKV 564
LT+KDV YIN L ++ DLSRL ++QVNLPVSM TTHSW+I LGC+YERATKSFYTD HEK++VV YRG+YI+ +RK+ALRQP+WVRVQR L EE+ RLD +K GP DF AEVYDC ++G++CIEFHVDLLRD+GSVD FD LRA LGPEGG +SVRF++AAA CEHFH P KC+C +K
Sbjct: 277 LTVKDVQNYINQWLFANEIGDLSRLLSHQVNLPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAEDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKA 462 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig633.36.1 >prot_P-littoralis_Contig633.36.1 ID=prot_P-littoralis_Contig633.36.1|Name=mRNA_P-littoralis_Contig633.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp LTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYback to top mRNA from alignment at P-littoralis_Contig633:164607..165356+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig633.36.1 ID=mRNA_P-littoralis_Contig633.36.1|Name=mRNA_P-littoralis_Contig633.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig633:164607..165356+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig633:164607..165356+ >mRNA_P-littoralis_Contig633.36.1 ID=mRNA_P-littoralis_Contig633.36.1|Name=mRNA_P-littoralis_Contig633.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig633:164607..165356+ (Pylaiella littoralis U1_48)back to top |