mRNA_P-littoralis_Contig633.32.7 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE) HSP 1 Score: 471 bits (1211), Expect = 2.850e-159 Identity = 230/251 (91.63%), Postives = 236/251 (94.02%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAAP 755
C+P DV+DFELQLCDTQPSCIGG CSEFV SGRLDNLCSSWQSIRALIDGC GDGLASCKGVRSVFLFDHEEVGSTSC GAAGTLLPDCMKRIAKGLAASPSD VMEAVVRKSFLVSADMAHALHPNYQDRH+PALGPK+H+GMVLKHN NQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMG DDAV GY HIKAVLENFFE+DGQL VD P
Sbjct: 109 CQPEDVKDFELQLCDTQPSCIGGTCSEFVLSGRLDNLCSSWQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCP 359
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 6.610e-147 Identity = 217/239 (90.79%), Postives = 223/239 (93.31%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFF 719
C+P DV+DFELQ DTQPSC+GGACSEFVFSGRLDN CSSWQSIRALIDGC GDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSD VMEAVVRKSFLVSADMAHALHPNYQDRH+PALGPK+H+GMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMG DDAV GY HIK V F
Sbjct: 197 CQPEDVKDFELQFWDTQPSCLGGACSEFVFSGRLDNFCSSWQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGVFVGCF 435
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA) HSP 1 Score: 318 bits (814), Expect = 7.960e-98 Identity = 162/251 (64.54%), Postives = 196/251 (78.09%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAA-SPSDV-VMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDA 749
C D+ DF+LQLCDTQPS IGGA +EF+FSGRLDNLCSS+Q +RAL+D D L + KGVR V LFDHEEVGS+S GA G +LP+ + RI +G+ SP V+ V RKSF VSADMAHA HPNY +RH+P L P +H+G+V+KHNANQRYAT+AVTA FRE A+ G+P QEFAV+SDSGCGSTIGP+ ++L+GIRTVD+GSPQLSMHSIRE+MG DDA +GY+ IKA ENF E+D L VDA
Sbjct: 221 CAETDILDFDLQLCDTQPSAIGGAANEFIFSGRLDNLCSSYQGLRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCADVLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDA 469
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA) HSP 1 Score: 313 bits (802), Expect = 9.240e-96 Identity = 165/285 (57.89%), Postives = 203/285 (71.23%), Query Frame = 3
Query: 15 DVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAAS----PSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAAP*GWPWKNAVKCQAGAFPTMSGSVV--GTDWAPTL 851
D+ DFELQLCDTQPS IGGA +EF+FSGRLDNLCSS+QS+RAL+D D L VR++ LFD+EEVGS+S GA G +LPD +KRI GL P+D+ + V+RKSF VSADMAHA HPNY +RH+PAL PK+H G+VLKHN NQRYA++AVT+ FR+ + LP QEFA +SD+GCGSTIGP+ +AL+G+RTVD+GSPQLSMHS+REMMG DDA HGY +KA NF +D L VD AP G P + + S+V G D PTL
Sbjct: 218 DILDFELQLCDTQPSMIGGAANEFIFSGRLDNLCSSYQSLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPADL-LPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAPNGVPNGAGARHNVVESQSQGDSLVTDGNDTQPTL 499
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU) HSP 1 Score: 310 bits (793), Expect = 1.530e-94 Identity = 152/250 (60.80%), Postives = 184/250 (73.60%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAA 752
C P D+ DF+LQLCDTQPS IGGA +EF++SGRLDNL S + S+ AL++ + LA +GVR + FDHEEVGS S GAAG + D +KRIA L+ + + E R SF VS+DMAHALHPNY DRHEPA PKMH G+V+KHNANQRYAT+AVTAF FRE+G RAG+P QEF V+SD+GCGSTIGP+ S +GIRTVDVG+ QLSMHSIRE+ G DD H H+ AV +F +LD L VD A
Sbjct: 228 CAPGDIVDFDLQLCDTQPSAIGGAQNEFIYSGRLDNLASCYTSLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGA 477
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A096PAP6_OSTTA (Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAP6_OSTTA) HSP 1 Score: 308 bits (790), Expect = 2.940e-94 Identity = 152/250 (60.80%), Postives = 180/250 (72.00%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAA 752
CEP D+ DF+LQLCDTQPS IGGA +EF++SGRLDNL S + S++AL++ D LA GVR + FDHEEVGS S GAAG + D +KRIA L + + + E R SF VS+DMAHALHPNY DRHEPA PK+H G+V+KHNANQRYAT+AVTAF FRELG R G+P QEF VKSD GCGSTIGP+ S +GIRTVDVG+ QLSMHSIRE+ G DD H H + NF +LD VD A
Sbjct: 217 CEPEDIVDFDLQLCDTQPSAIGGAQNEFIYSGRLDNLASCYTSLQALLNASTDDALAGASGVRMIMHFDHEEVGSESTSGAAGAMTTDAIKRIAAALNPNAVEGLDERTRRASFCVSSDMAHALHPNYTDRHEPAHTPKLHGGLVIKHNANQRYATDAVTAFMFRELGERVGVPVQEFVVKSDMGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGTDDVEHAIKHFTSTFMNFLDLDRTFIVDGA 466
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU) HSP 1 Score: 306 bits (783), Expect = 2.250e-93 Identity = 150/249 (60.24%), Postives = 184/249 (73.90%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCK-GVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
C+P ++ DFELQLCDTQPS I G EF+FSGR+DNLC S+ S++AL+D A L + GVR V LFDHEEVGS S GA ++ D + R+ ++ S S V +E V++KSFLVSADMAH LHPNY DRHE PKMH G+V+KHNANQRYATNAVT+F FRE+G LP Q+F V++D CGSTIGP+L++ GIRTVD+G+PQLSMHSIREM GVDD VH Y H+KA E F +LD Q+ VD
Sbjct: 238 CKPEEICDFELQLCDTQPSVIAGVAKEFIFSGRIDNLCMSFCSLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: W1NDQ7_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NDQ7_AMBTC) HSP 1 Score: 298 bits (762), Expect = 3.710e-92 Identity = 148/248 (59.68%), Postives = 181/248 (72.98%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
CEP ++ DFELQ CDTQPS IGGA EF+FSGRLDNLC S+ S+RAL D A LA+ GVR V LFDHEEVGS S GA ++ D + RI +S S V +E V++SFLVSADMAHALHPNY D+HE P++H G+V+KHNANQRYA+N+VT+F FRE+ + LP QEF V++D CGSTIGP+L++ GIRTVDVG+PQLSMHSIREM VDD H Y H KA F +LD +++VD
Sbjct: 97 CEPDEICDFELQACDTQPSIIGGAAKEFMFSGRLDNLCMSFCSLRALFDSTAEGSLANETGVRMVALFDHEEVGSDSAQGAGSPIILDALARITNSFCSSGSKV-LEKAVQRSFLVSADMAHALHPNYMDKHEENHQPRLHGGLVIKHNANQRYASNSVTSFIFREIAKQHKLPVQEFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCSVDDVKHSYEHFKAFFHEFAQLDAKISVD 343
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A1S4B014_TOBAC (probable aspartyl aminopeptidase n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4B014_TOBAC) HSP 1 Score: 297 bits (761), Expect = 6.130e-92 Identity = 147/248 (59.27%), Postives = 181/248 (72.98%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
CEP+D+ DFELQ CDTQPS I GA EFVFSGRLDNLCSS+ S++ALID + + L GVR V LFDHEEVGS S GA ++ D + RI SP ++ +++SFLVSADMAHALHPNY D+HE PK H G+V+KHNANQRYATNAVT+F FRE+ A+ +P Q+F +++D CGSTIGP+L++ GIRTVDVG+PQ SMHSIREM VDD H Y H KA ++F LDG++AVD
Sbjct: 103 CEPSDICDFELQACDTQPSVIAGAMKEFVFSGRLDNLCSSFCSLKALIDATSQNSLEDEVGVRMVALFDHEEVGSASAQGAGSPVMFDALSRITNTF--SPDSKLIPKAIQRSFLVSADMAHALHPNYPDKHEENHQPKFHGGLVIKHNANQRYATNAVTSFIFREIAAKHNIPIQDFVIRNDMPCGSTIGPILASGIGIRTVDVGAPQWSMHSIREMCAVDDVKHSYQHFKAFFQDFSLLDGKIAVD 348
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A3S6N245_9SPER (Zn-dependent exopeptidases superfamily protein n=18 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N245_9SPER) HSP 1 Score: 301 bits (772), Expect = 1.240e-91 Identity = 148/249 (59.44%), Postives = 185/249 (74.30%), Query Frame = 3
Query: 3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGD-GLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
CE ++ DFELQLCDTQPS + G +EF+FSGRLDNLC S+ S++AL+DG A + L GVR V LFDHEEVGS S GA ++ D RI L+A S V +E V+++SFLVSADMAH LHPNY D+HE P+MH G+V+K+NANQRYATNAVT+F FRE+G + +P Q+F V++D GCGSTIGP+L++ GIRTVDVG+PQLSMHSIREM GVDD ++ Y H+KA E F LD Q+ VD
Sbjct: 247 CEAEEICDFELQLCDTQPSVVAGVENEFIFSGRLDNLCMSFCSLKALLDGTASEESLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDAFSRITSSLSAHGSKVSLEKVIQRSFLVSADMAHCLHPNYMDKHEDNHQPRMHNGLVIKNNANQRYATNAVTSFIFREIGKKHKIPVQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCGVDDVIYSYEHLKAYFEEFTNLDSQIKVD 495 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig633.32.7 >prot_P-littoralis_Contig633.32.7 ID=prot_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp MKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKback to top mRNA from alignment at P-littoralis_Contig633:133527..139298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig633.32.7 ID=mRNA_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=5772bp|location=Sequence derived from alignment at P-littoralis_Contig633:133527..139298+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig633:133527..139298+ >mRNA_P-littoralis_Contig633.32.7 ID=mRNA_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=CDS|length=489bp|location=Sequence derived from alignment at P-littoralis_Contig633:133527..139298+ (Pylaiella littoralis U1_48)back to top |