mRNA_P-littoralis_Contig633.32.7 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig633.32.7
Unique NamemRNA_P-littoralis_Contig633.32.7
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 2.850e-159
Identity = 230/251 (91.63%), Postives = 236/251 (94.02%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAAP 755
            C+P DV+DFELQLCDTQPSCIGG CSEFV SGRLDNLCSSWQSIRALIDGC GDGLASCKGVRSVFLFDHEEVGSTSC GAAGTLLPDCMKRIAKGLAASPSD VMEAVVRKSFLVSADMAHALHPNYQDRH+PALGPK+H+GMVLKHN NQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMG DDAV GY HIKAVLENFFE+DGQL VD  P
Sbjct:  109 CQPEDVKDFELQLCDTQPSCIGGTCSEFVLSGRLDNLCSSWQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCP 359          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 6.610e-147
Identity = 217/239 (90.79%), Postives = 223/239 (93.31%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFF 719
            C+P DV+DFELQ  DTQPSC+GGACSEFVFSGRLDN CSSWQSIRALIDGC GDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSD VMEAVVRKSFLVSADMAHALHPNYQDRH+PALGPK+H+GMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMG DDAV GY HIK V    F
Sbjct:  197 CQPEDVKDFELQFWDTQPSCLGGACSEFVFSGRLDNFCSSWQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGVFVGCF 435          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA)

HSP 1 Score: 318 bits (814), Expect = 7.960e-98
Identity = 162/251 (64.54%), Postives = 196/251 (78.09%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAA-SPSDV-VMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDA 749
            C   D+ DF+LQLCDTQPS IGGA +EF+FSGRLDNLCSS+Q +RAL+D    D L + KGVR V LFDHEEVGS+S  GA G +LP+ + RI +G+   SP    V+  V RKSF VSADMAHA HPNY +RH+P L P +H+G+V+KHNANQRYAT+AVTA  FRE  A+ G+P QEFAV+SDSGCGSTIGP+ ++L+GIRTVD+GSPQLSMHSIRE+MG DDA +GY+ IKA  ENF E+D  L VDA
Sbjct:  221 CAETDILDFDLQLCDTQPSAIGGAANEFIFSGRLDNLCSSYQGLRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCADVLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDA 469          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.240e-96
Identity = 165/285 (57.89%), Postives = 203/285 (71.23%), Query Frame = 3
Query:   15 DVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAAS----PSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAAP*GWPWKNAVKCQAGAFPTMSGSVV--GTDWAPTL 851
            D+ DFELQLCDTQPS IGGA +EF+FSGRLDNLCSS+QS+RAL+D    D L     VR++ LFD+EEVGS+S  GA G +LPD +KRI  GL       P+D+ +  V+RKSF VSADMAHA HPNY +RH+PAL PK+H G+VLKHN NQRYA++AVT+  FR+   +  LP QEFA +SD+GCGSTIGP+ +AL+G+RTVD+GSPQLSMHS+REMMG DDA HGY  +KA   NF  +D  L VD AP G P     +       +   S+V  G D  PTL
Sbjct:  218 DILDFELQLCDTQPSMIGGAANEFIFSGRLDNLCSSYQSLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPADL-LPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAPNGVPNGAGARHNVVESQSQGDSLVTDGNDTQPTL 499          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU)

HSP 1 Score: 310 bits (793), Expect = 1.530e-94
Identity = 152/250 (60.80%), Postives = 184/250 (73.60%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAA 752
            C P D+ DF+LQLCDTQPS IGGA +EF++SGRLDNL S + S+ AL++    + LA  +GVR +  FDHEEVGS S  GAAG +  D +KRIA  L+    + + E   R SF VS+DMAHALHPNY DRHEPA  PKMH G+V+KHNANQRYAT+AVTAF FRE+G RAG+P QEF V+SD+GCGSTIGP+ S  +GIRTVDVG+ QLSMHSIRE+ G DD  H   H+ AV  +F +LD  L VD A
Sbjct:  228 CAPGDIVDFDLQLCDTQPSAIGGAQNEFIYSGRLDNLASCYTSLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGA 477          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A096PAP6_OSTTA (Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAP6_OSTTA)

HSP 1 Score: 308 bits (790), Expect = 2.940e-94
Identity = 152/250 (60.80%), Postives = 180/250 (72.00%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVDAA 752
            CEP D+ DF+LQLCDTQPS IGGA +EF++SGRLDNL S + S++AL++    D LA   GVR +  FDHEEVGS S  GAAG +  D +KRIA  L  +  + + E   R SF VS+DMAHALHPNY DRHEPA  PK+H G+V+KHNANQRYAT+AVTAF FRELG R G+P QEF VKSD GCGSTIGP+ S  +GIRTVDVG+ QLSMHSIRE+ G DD  H   H  +   NF +LD    VD A
Sbjct:  217 CEPEDIVDFDLQLCDTQPSAIGGAQNEFIYSGRLDNLASCYTSLQALLNASTDDALAGASGVRMIMHFDHEEVGSESTSGAAGAMTTDAIKRIAAALNPNAVEGLDERTRRASFCVSSDMAHALHPNYTDRHEPAHTPKLHGGLVIKHNANQRYATDAVTAFMFRELGERVGVPVQEFVVKSDMGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGTDDVEHAIKHFTSTFMNFLDLDRTFIVDGA 466          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU)

HSP 1 Score: 306 bits (783), Expect = 2.250e-93
Identity = 150/249 (60.24%), Postives = 184/249 (73.90%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCK-GVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
            C+P ++ DFELQLCDTQPS I G   EF+FSGR+DNLC S+ S++AL+D  A   L   + GVR V LFDHEEVGS S  GA   ++ D + R+   ++ S S V +E V++KSFLVSADMAH LHPNY DRHE    PKMH G+V+KHNANQRYATNAVT+F FRE+G    LP Q+F V++D  CGSTIGP+L++  GIRTVD+G+PQLSMHSIREM GVDD VH Y H+KA  E F +LD Q+ VD
Sbjct:  238 CKPEEICDFELQLCDTQPSVIAGVAKEFIFSGRIDNLCMSFCSLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: W1NDQ7_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NDQ7_AMBTC)

HSP 1 Score: 298 bits (762), Expect = 3.710e-92
Identity = 148/248 (59.68%), Postives = 181/248 (72.98%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
            CEP ++ DFELQ CDTQPS IGGA  EF+FSGRLDNLC S+ S+RAL D  A   LA+  GVR V LFDHEEVGS S  GA   ++ D + RI     +S S V +E  V++SFLVSADMAHALHPNY D+HE    P++H G+V+KHNANQRYA+N+VT+F FRE+  +  LP QEF V++D  CGSTIGP+L++  GIRTVDVG+PQLSMHSIREM  VDD  H Y H KA    F +LD +++VD
Sbjct:   97 CEPDEICDFELQACDTQPSIIGGAAKEFMFSGRLDNLCMSFCSLRALFDSTAEGSLANETGVRMVALFDHEEVGSDSAQGAGSPIILDALARITNSFCSSGSKV-LEKAVQRSFLVSADMAHALHPNYMDKHEENHQPRLHGGLVIKHNANQRYASNSVTSFIFREIAKQHKLPVQEFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCSVDDVKHSYEHFKAFFHEFAQLDAKISVD 343          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A1S4B014_TOBAC (probable aspartyl aminopeptidase n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4B014_TOBAC)

HSP 1 Score: 297 bits (761), Expect = 6.130e-92
Identity = 147/248 (59.27%), Postives = 181/248 (72.98%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
            CEP+D+ DFELQ CDTQPS I GA  EFVFSGRLDNLCSS+ S++ALID  + + L    GVR V LFDHEEVGS S  GA   ++ D + RI      SP   ++   +++SFLVSADMAHALHPNY D+HE    PK H G+V+KHNANQRYATNAVT+F FRE+ A+  +P Q+F +++D  CGSTIGP+L++  GIRTVDVG+PQ SMHSIREM  VDD  H Y H KA  ++F  LDG++AVD
Sbjct:  103 CEPSDICDFELQACDTQPSVIAGAMKEFVFSGRLDNLCSSFCSLKALIDATSQNSLEDEVGVRMVALFDHEEVGSASAQGAGSPVMFDALSRITNTF--SPDSKLIPKAIQRSFLVSADMAHALHPNYPDKHEENHQPKFHGGLVIKHNANQRYATNAVTSFIFREIAAKHNIPIQDFVIRNDMPCGSTIGPILASGIGIRTVDVGAPQWSMHSIREMCAVDDVKHSYQHFKAFFQDFSLLDGKIAVD 348          
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Match: A0A3S6N245_9SPER (Zn-dependent exopeptidases superfamily protein n=18 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N245_9SPER)

HSP 1 Score: 301 bits (772), Expect = 1.240e-91
Identity = 148/249 (59.44%), Postives = 185/249 (74.30%), Query Frame = 3
Query:    3 CEPADVEDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQSIRALIDGCAGD-GLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPKMHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFFELDGQLAVD 746
            CE  ++ DFELQLCDTQPS + G  +EF+FSGRLDNLC S+ S++AL+DG A +  L    GVR V LFDHEEVGS S  GA   ++ D   RI   L+A  S V +E V+++SFLVSADMAH LHPNY D+HE    P+MH G+V+K+NANQRYATNAVT+F FRE+G +  +P Q+F V++D GCGSTIGP+L++  GIRTVDVG+PQLSMHSIREM GVDD ++ Y H+KA  E F  LD Q+ VD
Sbjct:  247 CEAEEICDFELQLCDTQPSVVAGVENEFIFSGRLDNLCMSFCSLKALLDGTASEESLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDAFSRITSSLSAHGSKVSLEKVIQRSFLVSADMAHCLHPNYMDKHEDNHQPRMHNGLVIKNNANQRYATNAVTSFIFREIGKKHKIPVQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCGVDDVIYSYEHLKAYFEEFTNLDSQIKVD 495          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.32.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHI3_9PHAE2.850e-15991.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK99_ECTSI6.610e-14790.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XZN9_9STRA7.960e-9864.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U6Z2_9STRA9.240e-9657.89Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A4S7N7_OSTLU1.530e-9460.80Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A096PAP6_OSTTA2.940e-9460.80Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=704... [more]
A0A0D6R3V7_ARACU2.250e-9360.24Uncharacterized protein n=2 Tax=Araucariaceae TaxI... [more]
W1NDQ7_AMBTC3.710e-9259.68Uncharacterized protein n=1 Tax=Amborella trichopo... [more]
A0A1S4B014_TOBAC6.130e-9259.27probable aspartyl aminopeptidase n=1 Tax=Nicotiana... [more]
A0A3S6N245_9SPER1.240e-9159.44Zn-dependent exopeptidases superfamily protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig633contigP-littoralis_Contig633:133527..139298 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK99
PFAMsPeptidase_M18
Model size1939
Max annot lvl2759|Eukaryota
KEGG koko:K01267
Hectar predicted targeting categoryother localisation
Exons6
Evalue8.38e-87
EggNOG OGsCOG1362@1|root,KOG2596@2759|Eukaryota
EC3.4.11.21
Descriptionaminopeptidase activity
Cds size489
COG categoryE
BRITEko00000,ko01000,ko01002,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig633.32.7prot_P-littoralis_Contig633.32.7Pylaiella littoralis U1_48polypeptideP-littoralis_Contig633 134557..138117 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791321.6212003-UTR-P-littoralis_Contig633:133526..1336541680791321.6212003-UTR-P-littoralis_Contig633:133526..133654Pylaiella littoralis U1_48UTRP-littoralis_Contig633 133527..133654 +
1680791321.6347742-UTR-P-littoralis_Contig633:134415..1345561680791321.6347742-UTR-P-littoralis_Contig633:134415..134556Pylaiella littoralis U1_48UTRP-littoralis_Contig633 134416..134556 +
1680791321.7220142-UTR-P-littoralis_Contig633:138117..1392981680791321.7220142-UTR-P-littoralis_Contig633:138117..139298Pylaiella littoralis U1_48UTRP-littoralis_Contig633 138118..139298 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791321.6443727-CDS-P-littoralis_Contig633:134556..1345641680791321.6443727-CDS-P-littoralis_Contig633:134556..134564Pylaiella littoralis U1_48CDSP-littoralis_Contig633 134557..134564 +
1680791321.6660237-CDS-P-littoralis_Contig633:135009..1350721680791321.6660237-CDS-P-littoralis_Contig633:135009..135072Pylaiella littoralis U1_48CDSP-littoralis_Contig633 135010..135072 +
1680791321.6770194-CDS-P-littoralis_Contig633:136161..1363601680791321.6770194-CDS-P-littoralis_Contig633:136161..136360Pylaiella littoralis U1_48CDSP-littoralis_Contig633 136162..136360 +
1680791321.6879683-CDS-P-littoralis_Contig633:136855..1370141680791321.6879683-CDS-P-littoralis_Contig633:136855..137014Pylaiella littoralis U1_48CDSP-littoralis_Contig633 136856..137014 +
1680791321.7056615-CDS-P-littoralis_Contig633:138057..1381171680791321.7056615-CDS-P-littoralis_Contig633:138057..138117Pylaiella littoralis U1_48CDSP-littoralis_Contig633 138058..138117 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig633.32.7

>prot_P-littoralis_Contig633.32.7 ID=prot_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp
MKRIAKGLAASPSDVVMEAVVRKSFLVSADMAHALHPNYQDRHEPALGPK
MHAGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGST
IGPMLSALSGIRTVDVGSPQLSMHSIREMMGVDDAVHGYSHIKAVLENFF
ELDGQLAVDAAP*
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mRNA from alignment at P-littoralis_Contig633:133527..139298+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig633.32.7 ID=mRNA_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=5772bp|location=Sequence derived from alignment at P-littoralis_Contig633:133527..139298+ (Pylaiella littoralis U1_48)
GATGCGAGCCAGCCGACGTGGAAGACTTCGAGCTCCAGCTGTGCGACACG CAGCCGTCCTGCATCGGGGGAGCGTGCTCCGAGTTCGTCTTCAGCGGTCG GCTTGACAACCTTTGCAGCTCCTGGCAGGCGTGTTTTGTTGTTGTTATTG TTGTTGTTGTTGTTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCT GTTGCTGTTGCTGTTGCTGTTGCTGTTGTTGTTGTTGCTGTTGCTGTTAC CAATTGCTGTTGCTTTTCTGCTGCTGCTGTTTCTGCTGCTGCTGTTTTGT GCTATTGCTTGTCACGCACGCTTACGACACGGTACTTGTAGACGGTTGCG ACAAAAGCCAGAGTTGGCACCTCCGTCGTGTGTGTGTAATTTGTCGTTGG TTGTTACATGAGCTCACCGCCAGAGCCTAGCCCGTGGTCACAAACCAGGC ACGTATCGCGCTACTGCTGCAGGAGGAAACACAACTCAGAATGAAATAAC GCGTATTGTGTGTTTTTGTTTGTGTGTAGTCTTTCATTGCCCGTGGTCAC AAACCAGGCACATTTCGCGCTTTCGTATGTAGGAGGAAACGTAATTTCAG ATGAAATAACGTATGCACTTAGTATGATGTTTTGTGTGTTTCGTATGCCG CTGTTTCTGTGTGTGCGTCCGTGTTCGTGGGCGAGCTTGCTTCGTACACA CGACGTGCACCCCTGCCGTTCGCCGTTCGCGGCACTGGACTTGACACACA GTCCCCCCCCCCCCATTATTGCTTCGCGTGCTCGATAATGGATCGATCGG CGAAAAAACAAATAAAACCGATTCGAAATGGACCGGGACGGATCGGAACG GAACAACAACAACAACAACAACAACAACGACAACCACAGTCGATTCGCGC GTTGATCGACGGCTGCGCCGGGGACGGGCTAGCCTCCTGCAAGGGGGTGC GGTCGGTATTCTTGTTCGACCACGAAGAGGTGGGCAGCACCTCTTGCCAC GGGGCTGCCGGCACTCTCCTTCCGGACTGCATGAAGAGGTGCGTGGGTCT GGCAGGTGTGGCAAGTGTGTAAAGGGGGGGGGGGGGGGCTATTTGGGGGT TAAGGTTGACATTTGTTTTGTTGTTTGGGTTTGTTTCGTCGGGACCGATA TATCTTCGTCTGTCTGTCTGTCTGTCGGTCGGTCTGTCGGTCTTGTCTAA TATTTCACTTGAGTATATGTAGAAGAATCGAGCAGCAGTCGACGTGCTTT TGTATCACAACTAAACTGCTGTCAAGCGCACCGCAGATGCCTTCATGCCT GCCTGTACGCTCGACCATCCATCCCCTCAACGAAAAAGCTTCCCTCTCAT GGCAACCCCTCCACCTCCACCCCCCACCTCCTTTCCCTTCCGCGCCCTCT CCCGTACGCTCGTTGTTTCGTCCTGCGTGATCGGTCGGCCCTACATTTTT TTTTCTTACTTTTTTTTACTTTTTTTTTCACAGGATTGCCAAGGGTTTGG CCGCGTCTCCTTCGGACGTGGTCATGGAAGCCGTCGTGCGCAAGAGGTGA CGCGACTGAAAACCTGCCAACCAACGTAGGCCGTACGGTATGATTCGGAT TAAAAAAAAAAATGCTGCGGTACCTGCTCTGTAGGCTGTAAATACGTACA GCAGTTATACGTTCACACCATATGATGCAAGGGGGAAGTAGCGAAGAAAT AAAAAAACAGTTGCCCGAAAACCTGGCGGGGGGTGTGGCGCGGTAGAGGT AGAGGGGCAAGGTTCGTGACTCAGGCTGACGTGTGCGGTAGACAACACGC TCGAAGCGTATGATATGATGGACAAAACGAAGAGGGTTGCTGCAGGATTT GCTGCCGAAAACCCGGTTGGCAGGGGACAGCAGCAGCAGCAGCAGCAGCA GCAGTCGTGACTCACTCGTTGCTCGCCTGCCTTAGAGAGAGCTCCGTTTG ACTACTCAAGCCCTTTGCATTGGGTGTCACAGTCCCCAGCGCCGTTCGTT TTCCCTGAAGAAAGTGCTTCCTTCCTTCCTGCCTTCCTGCGTTTTGTTTT AGTGTGTATTTTGTGCGCGCACGTATACATCACATTGTATGATATGACAC TTACATACGTTACATAACCTACGCTTTTCTTCCCTTATTTTTCTCTCTTC CTTTTCTATTTTTTGAAACGCGCGCTATGATATGATTTTAAACCCTTCAT CATTGTTGAGGGGTTAAAAATTGACCCAACCCCCCACCCGCCTTTGTTTT CTCCCCGTGCGGCGGGGAAACCGCCTCCGTCTCTCTCTCTGACTCTCTCT CTCTCTCTCTTCCTCTCTCTCTCTCTCTCCCTCTCTCTCCCTCTCCCTCT CTCTCTCTCTCCCTCTCTCTCTTCTGCGAGTGTGTCGGTTTTCGATTTCG ACTTCTCCTGCTCGTGCAATCAAAAATGGCGTTTCATATCATCTCGTATC GTATCACATTTTATTTTTTCAACTTATTTTTGTTTTTTTTGGTGCTGTGC CACTTATTTTGCACGGTCTTTGCTTTTCTCTGTTGTTCGTGTGCTCCTGG TTATGCTGCTGCTGCTGCTGCCGGTGCTGCCGGTGCTGCCGGTGCTTCTC CTGCATGCATGCCTCCATGCATGCGACGCGCGAAGCTTCTTGGTCTCGGC CGACATGGCGCACGCCCTGCACCCCAACTACCAGGACAGGCACGAGCCCG CTCTGGGTCCCAAGATGCACGCCGGGATGGTCCTCAAGCACAACGCTAAC CAGCGGTACGCGACCAATGCGGTGACGGCCTTCTTTTTCAGGGAGCTGGG TGCTCGTGCGGGGTTACCTACTCAGGAGTTCGCGGTGAGGAGGCGCAGGC GGTGGGGGGTGGGGGGGGCGGGGAAGAGGTGGCTACAGTGAGGTTGTTGT TGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGCTGTTGCTGTTGCTGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGTAGTTGTTTGTTGTTTTCTCCCACT AGCCACTGGCAAAAGCCAAATCGCGTGACCACGAAAGTACTCGAGCCGTA CCTGTATTGGTCGGTGCTTGTGCTTTTTCGATCGTCGATGGTGAATGAGA TGCACGTATCATATCATACATGCGTCACTGCTCTGCGGCGCTTTTTGTAT TATTTTTCAGCGATTGTTGTGTGATTCGTGCATGTAATTCGGGTGATTCG GGTGATTGATTGATCTTTCCAGGCGAAGCGTGTGATTCGTGTGATTCGTG TGATTCGTGTGACTGTTTGATCGTTGCAGGTGAAGAGCGACTCGGGCTGC GGGAGCACGATCGGCCCGATGCTTTCCGCCCTTTCGGGAATCAGGACAGT GGACGTGGGGTCGCCGCAGCTGTCCATGCACTCGATCCGAGAGATGATGG GGGTGGACGATGCCGTGCACGGGTACAGCCACATCAAGGTGTGATATATA CGAAGTATATATATAAATTTACGAAATTATATTCTTGCTTTTGGTATACA GTATATATTTTGTTTGTTGTGATTGATTGTGTTGATGATTTTGTTGATTT CATCATCGTTGTTTTATTTACTCAAAAGCATATTTTCTAGTATCACACGT TCAGTAGCTTTTTATGTCTGTCGTTGATTCTGTGGATTCGTGTAGATTTT GATCATGTATAGCGTTTTGGCGTTGTTTTGCCCCACATCGTGGGTTGCTT TTTGGAGGGCGTAGTGTACATTACATGGACCCAAGACACGATGATGCAAT TCCGACGGCAGAGGCGAGTTCTGTCACTTGATTGATCTCGTACGCATTGA GCTTCTTCCATGTGTATGGGGGACGGGGCACAGCGAGTCGCACAGCTTAT CTTGTCGGCGATGTGGGGAGTGTGGGGGGGGTGATATCATACGTGATGCG CGCGCGTGCACACAACCGAAAACAGCTTCATCTTCGAAAACAATTTGTCA TGAAGAGGATTTTTACAAAACTTCAGCAAAGAATGAGCGCAATGTTGACA GCTCACGTTGCGCCACGAATGTGCGGTATCTTCATATGCATCTACCTACC AGTACCTATCATGTCACACATCATGTCACACATCGTTTTTCGTCTCCGTG AGTTATTTATGTTTGTTGCTCTTGGGGGGGACACGACTAATTTGCCGTGA TATCTACGTACGTACCCCGGGGGGCAATATCGAAATATAAATAAACCTAC TTGAACCCCCTCTCGGCCGTGAATTCCTGACACCAACATCAATACCGATG CTCTCTACAGGGCGTGCCAAGTGCACACACACACACAGAGAGAGAGAGAG GTGTACTTCGAAAATCACAAAGGCGTTTGTACATACAGCAGCAGCAGCAG CAGCAGCCTCGACCAAACATCTTTCTTCTCCCTCCCGACAGCCCCACCCT CTCACCGTGCTTTGTTTGCTCACCTACTTACACGCTGCTGCTTTGTTTGC TCGCCGTCTCGTCCGTTTTTTTTTTTCTAAGGCTGTTTTGGAAAACTTCT TTGAGCTCGACGGCCAGCTGGCGGTGGACGCGGCACCATAGGGGTGGCCT TGGAAAAATGCCGTCAAGTGTCAGGCAGGCGCCTTTCCGACAATGTCTGG TTCGGTTGTTGGTACGGACTGGGCGCCAACTCTGTTTTGGAGATAAATTG TCGTGGTCGGGCGTTGGAAAAAAAAAAAAAAAGACGGGGTGGGGTTCGCC CAGCTCGTTCTTGTTCTTGGTGAAGACCGCTGTAGTACTGCTAGTGGTGT GTTCCTGGCGGGCCCCGCTTCCCCACGAGGTTTTGGACGTCGTCGGTTGT TTGCAAGGAGGAGGAGGAGGAGGAGAATACCATGCGGGAAGGATTCATTC GCTCCCCGCATTTTTGTTCGTGTTGAGTTTTGTCGTGCCACCCACCTGAA GTGGTCTGTGTGTGCCTTCTTTTGCTGCTTTAGCGGTGTTGTCGACGTTG TTTCGATGTGTGTCAAAAAGTGGTTGGGGTGTTGTTTGTTGTTTGTTTCT TGCTGTTGCTGTCATGCGTGCTGGCCTCGCGCGTCTGTTTTTACCCCTAT CCGGTAAGTTAACCCGTGTATGACACGCGCAATCGATCGTGTACCCATCT TCGTTTTTGAGGCGTCGCTACAAGTACAACTATTACTGCTGCTGCTTCTG TTGCTGCTGCTGCTGCTGCTGCTGTGTGAAATAGGGTAATAGGCCAATCG TACCGCGTGATGGGTTCGCATGATATATCATCATATCGCGCCCCGAGACC AAGCGGGGTAGAGTAGAGCGGGGAATGACTTGAGCCAAAAGTGGGACGAG CCTGAAATAACGATCGCTCGCGTCGCGGACGGCCTGAAAAAATAAGGGGG GGGGATAACGGTGACAGCAATCATGTGTAAATAAATAATGGCCTGAAAAC AAATTAACGGGGACGAAGGGAGACGGTGAAGTGGGTTTGAAGCCGCGAGG GTCAGCGAAAAAAACGCCAAAAACCTTCACGTGCCGCATGCTATCAGTGC GGACACGCAGAAGATCATTCGCGTCGCGGACGGCCTGAAAAGAAAAATGG GATAACGGACGGTGACAGCAATGTGCAAAAAATGTGCTGGAAGCATGACA TACAGGTGGGTATGAGGTAAGTGTACCGCGTGATGAAATAGCGCTCCAAC AACACGACGTGTCGTGAGCGTTCGGCGCACCTATTATGGTAAATGAAATA AGGTCGTGGCATTGATCGCGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig633:133527..139298+

>mRNA_P-littoralis_Contig633.32.7 ID=mRNA_P-littoralis_Contig633.32.7|Name=mRNA_P-littoralis_Contig633.32.7|organism=Pylaiella littoralis U1_48|type=CDS|length=489bp|location=Sequence derived from alignment at P-littoralis_Contig633:133527..139298+ (Pylaiella littoralis U1_48)
ATGAAGAGGATTGCCAAGGGTTTGGCCGCGTCTCCTTCGGACGTGGTCAT
GGAAGCCGTCGTGCGCAAGAGCTTCTTGGTCTCGGCCGACATGGCGCACG
CCCTGCACCCCAACTACCAGGACAGGCACGAGCCCGCTCTGGGTCCCAAG
ATGCACGCCGGGATGGTCCTCAAGCACAACGCTAACCAGCGGTACGCGAC
CAATGCGGTGACGGCCTTCTTTTTCAGGGAGCTGGGTGCTCGTGCGGGGT
TACCTACTCAGGAGTTCGCGGTGAAGAGCGACTCGGGCTGCGGGAGCACG
ATCGGCCCGATGCTTTCCGCCCTTTCGGGAATCAGGACAGTGGACGTGGG
GTCGCCGCAGCTGTCCATGCACTCGATCCGAGAGATGATGGGGGTGGACG
ATGCCGTGCACGGGTACAGCCACATCAAGGCTGTTTTGGAAAACTTCTTT
GAGCTCGACGGCCAGCTGGCGGTGGACGCGGCACCATAG
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