prot_P-littoralis_Contig633.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig633.7.1
Unique Nameprot_P-littoralis_Contig633.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length601
Homology
BLAST of mRNA_P-littoralis_Contig633.7.1 vs. uniprot
Match: D8LK95_ECTSI (KH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK95_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 4.500e-112
Identity = 219/359 (61.00%), Postives = 254/359 (70.75%), Query Frame = 0
Query:  254 DVAGETAQWAADNSRGGEFTQMLESVRRDSGAMSVDTRVVLKQGKGQHGGRAQMETLHVDIRASTPAQARVARALMETHLKSRSELLRLEQSRRSMEGSLSAFERKVSMGLHVRFPTRSEWIGLLVGKAGARIRDLRKSTGCSIEVCGGNGSGRGXXXXXXXXXXDGG----HGITVNRPPSKLTPPCKVVISGPDADSVQRAREEMELVEARIPVDQHQAAILGHLPRTKLLDLRRQSGCMVVDLRSIPPTSEEXXXXRQRGALTGESADSFFMG-----------GAAVAGAAVRAVGPRATVDSARMLLGVVLVYMGQEREMREGDAAVRERLLNLQASYGHPGFARSTMGGVAAG 597
            DVAG+ AQWAADNSRGGEFT++LE+VRRDSG +SVDTR VLKQG+G+ G RAQ++ +HVDIRA+TPAQARVARAL++TH KSRSELLRLE +RRSMEGSLSAFER+VS GL V+F +R EWIGLLVGKAG+RIR LRKSTGCSIEV  G      XXXXXXXXXX       H     +PP+  +  C+VVI GPDA SVQRARE+MEL E RI V+  QAA+LG LPR KLLDLR+QS CMVVDL      S      RQ                          GA     +VR +GPR TVDSAR+LLGVVL YM +ERE+REGD  VR +LL++QAS+GHPG AR       AG
Sbjct:   73 DVAGDIAQWAADNSRGGEFTKVLEAVRRDSGVVSVDTRAVLKQGRGK-GARAQIDKVHVDIRAATPAQARVARALLQTHFKSRSELLRLEHARRSMEGSLSAFEREVSQGLRVQFASRPEWIGLLVGKAGSRIRGLRKSTGCSIEVIDGXXXXXXXXXXXXXXXXXXXXXXXHKAARGQPPAPSS--CRVVICGPDAGSVQRAREQMELTEVRIAVNPQQAAVLGRLPRAKLLDLRQQSQCMVVDLLQ----SGSACQGRQXXXXXXXXXXXXXXXXXXXXXXXXXXGAVTGVMSVRVIGPRPTVDSARLLLGVVLEYMDRERELREGDNVVRGKLLDMQASFGHPGTARPAAWAAKAG 424          
BLAST of mRNA_P-littoralis_Contig633.7.1 vs. uniprot
Match: A0A7S3M9F7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9F7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.480e-12
Identity = 72/276 (26.09%), Postives = 120/276 (43.48%), Query Frame = 0
Query:  312 VDIRASTPAQARVARALMETHLKSRSELLRLEQSRRSMEGSLSAFERKVSMGLHVRFPTRSEWIGLLVGKAGARIRDLRKSTGC-SIEVCGGNGSGRGXXXXXXXXXXDGGHGITVNRPPSKLTPPCKVVISGPDADSVQRAREEMELVEARIPVDQHQAAILGHLPRTKLL-DLRRQSGCMVVDLRSIPPTSEEXXXXRQRGALTGESADSFFMGGAAVAGAAVRAVGPRATVDSARMLLGVVLVYMGQEREMREGDAAVRERLLNLQASYGHPG 585
            + I A +   A++AR L+ETH K +++L   E   + ++  L + + +++ G+ + F    E +GL +GK GARI+ + + T   SI V G  G                                 ++++ GPD+ SVQRARE +EL E  IP++ HQ   L +   +  L D++  S  +V  + S                      + F +            VG    V SAR +L   L Y+ ++ E+   + A RE+L  ++  YG PG
Sbjct:   92 ISIDAPSRESAQLARGLIETHFKLQAKLKHAETRLQKVQTDLFSAQGEIASGMMIEFSIDPELVGLALGKKGARIKQIEQDTKVTSINVTGETG---------------------------------RIMVVGPDSQSVQRARELLELQEECIPLESHQIEWLSNKFNSGFLHDIKTGSDLIVTRVNS----------------------EKFTLD----------IVGTLQAVRSARFMLSTQLEYVEKQIEIEASERAAREKLQQMRKQYGMPG 302          
BLAST of mRNA_P-littoralis_Contig633.7.1 vs. uniprot
Match: A0A812SYZ7_SYMMI (Fxr1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SYZ7_SYMMI)

HSP 1 Score: 61.2 bits (147), Expect = 3.540e-6
Identity = 63/252 (25.00%), Postives = 109/252 (43.25%), Query Frame = 0
Query:  334 KSRSELLRLEQSRRSMEGSLSAFERKVSMGLHVRFPTRSEWIGLLVGKAGARIRDLRKSTGCS-IEVCGGNGSGRGXXXXXXXXXXDGGHGITVNRPPSKLTPPCKVVISGPDADSVQRAREEMELVEARIPVDQHQAAILGHLPR--TKLLDLRRQSGCMVVDLRSIPPTSEEXXXXRQRGALTGESADSFFMGGAAVAGAAVRAVGPRATVDSARMLLGVVLVYMGQEREMREGDAAVRERLLNLQASYG 582
            K +SE+ RL Q    M+ +L   + +V+ G  + F    + IGL++GK G+RI ++++ T    I + G  G                                 +V I GP   +VQRARE +++VE R+PV+    A +  L R  + + D++  S C+V  L                       ADS  +            +GPR+ V SA+++L   L Y+ +  ++ E + ++R++L +L    G
Sbjct:   12 KYQSEMQRLHQ----MQENLFEVQGEVASGQRIEFQVPMDLIGLIIGKKGSRIHEVQQETDVQGIHIDGNTG---------------------------------RVTIIGPSHMAVQRARELVDVVEERVPVN---PAAVPSLQRDFSSMNDIKTMSKCLVAKL---------------------SPADSQVV-----------LIGPRSAVASAKLVLDTQLEYITKRVQLYESEKSIRDQLSHLNKRTG 191          
BLAST of mRNA_P-littoralis_Contig633.7.1 vs. uniprot
Match: A0A7S3WR59_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WR59_EMIHU)

HSP 1 Score: 58.2 bits (139), Expect = 3.650e-5
Identity = 68/259 (26.25%), Postives = 103/259 (39.77%), Query Frame = 0
Query:  325 ARALMETHLKSRSELLRLEQSRRSMEGSLSAFERKVSMGLHVRFPTRSEWIGLLVGKAGARIRDLRKSTGCS-IEVCGGNGSGRGXXXXXXXXXXDGGHGITVNRPPSKLTPPCKVVISGPDADSVQRAREEMELVEARIPVDQHQAA-ILGHLPRT-KLLDLRRQSGCMVVDLRSIPPTSEEXXXXRQRGALTGESADSFFMGGAAVAGAAVRAVGPRATVDSARMLLGVVLVYMGQ-EREMREGDAAVRE-RLLNLQ 578
            A+ L+E H K   ++ R+   R  +   L     +++    + FP   E IGL+VGK GA +R  +K+ G   +EV                   DG                 +VVI GP  +S++ ARE +E V  R+PV+Q Q   ++G   RT K L  + Q   + +D                      ++A    +            VG R  VDSA   +   L Y+ + E E RE +   RE R + LQ
Sbjct:  195 AKMLIELHGKHVGDMARVHSEREQLSAKLQHERERLTASFRLEFPVDKELIGLVVGKGGATVRSAQKAAGVDKVEV-----------------DPDGP----------------RVVIVGPSQESIEAARELLEFVSRRVPVEQEQIGWLIGKGGRTFKELQEKTQVTRLSID----------------------KAAGQVVL------------VGTRTAVDSALAYMDTHLQYLSEFEHEARESERLRRELRGITLQ 386          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LK95_ECTSI4.500e-11261.00KH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A7S3M9F7_9STRA2.480e-1226.09Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812SYZ7_SYMMI3.540e-625.00Fxr1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S3WR59_EMIHU3.650e-526.25Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..515
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 363..456
score: 10.043043
NoneNo IPR availableCDDcd00105KH-Icoord: 375..457
e-value: 9.90226E-6
score: 41.3915
IPR004087K Homology domainSMARTSM00322kh_6coord: 362..461
e-value: 3.4E-5
score: 33.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 354..462
e-value: 5.2E-8
score: 34.4
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 366..460
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 372..457
e-value: 1.9E-8
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig633contigP-littoralis_Contig633:66246..69847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig633.7.1mRNA_P-littoralis_Contig633.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig633 65105..69847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig633.7.1 ID=prot_P-littoralis_Contig633.7.1|Name=mRNA_P-littoralis_Contig633.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=601bp
MIPRQMAIGGRSPNLTTDCEDRSPLPVRARARGEGDSIDSLCSSLLDILV
ESEELPSSKPIVVESRALVQKGGGAPLARSSGSSPATATAAAEAVAASDV
NARNSKRDVGRREQQQEQEQELRQQQRQQRQNRQNKQQEQQQQRQNKQNK
QQHQKQQLHQQHQQHQQHQQQPKKEENTKPVVLPAQQQLENDKTGVAKKK
KNKKERGGGGGGGGGSGGGGSGSGGSGSGGSGSGGSGSGGGSGGVPKVLL
ETVDVAGETAQWAADNSRGGEFTQMLESVRRDSGAMSVDTRVVLKQGKGQ
HGGRAQMETLHVDIRASTPAQARVARALMETHLKSRSELLRLEQSRRSME
GSLSAFERKVSMGLHVRFPTRSEWIGLLVGKAGARIRDLRKSTGCSIEVC
GGNGSGRGGGSSGGGRGGDGGHGITVNRPPSKLTPPCKVVISGPDADSVQ
RAREEMELVEARIPVDQHQAAILGHLPRTKLLDLRRQSGCMVVDLRSIPP
TSEEQQQQRQRGALTGESADSFFMGGAAVAGAAVRAVGPRATVDSARMLL
GVVLVYMGQEREMREGDAAVRERLLNLQASYGHPGFARSTMGGVAAGGRG
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1