mRNA_P-littoralis_Contig633.5.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig633.5.2
Unique NamemRNA_P-littoralis_Contig633.5.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 3.980e-157
Identity = 254/389 (65.30%), Postives = 282/389 (72.49%), Query Frame = 3 
Query:  300 ADQTRDGEHRAVLSTAFRLKALEIVRDVSAGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQE------WHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPP-AFVVAASATS---AVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYEWVRAGTSAALD 1436
            ADQ +DGE RA L+     KALE+ R   AGATAGAVSRVLTAPLDV KIRFQLDH  TRRY+ ++WAAMRSIYGEEGL+TLWRGNLPAM LW+AYT VQF AYEQLR  DFL S Q++  S                                 E    R  GRE E        ++ GRGRGLPPAL+NFVYG++AAFTATL TYPLD+TRTALAFQGVPKRY+SMS F+ RT RE GVRGLFRG TPTLAMITPQMGVSFA WEAL    P AF  + S  S    +SWQL AG +AGM GKLV+FPLDTVKKRVQTA M+ER+  YGVLPKYAGPVHA KTVL+EEGA ALFRG+VPAMWK+G STA TYAVYEWVR GT+ ALD
Sbjct:   20 ADQVQDGEPRAALTAVLTSKALEVARSGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQHNSVSGGGVRYRGSSCPSSSSPHERRGAGRVG------EVGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSTYGVLPKYAGPVHAFKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRVGTAVALD 402
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 3.330e-115
Identity = 200/322 (62.11%), Postives = 223/322 (69.25%), Query Frame = 3 
Query:  312 RDGEHRAVLSTAFRLKALEIVRDVSAGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNS----------RGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALK--ANPPAFVVAASATS---AVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTA 1232
            +DGE  A L+     KALE+ R+  AGATAGAVSRVLTAPLDV KIRFQLDH  TRRY+ ++WAAMRSIYGEEGL+TLWRGNLPAM LWSAYT VQF AYEQLR  DFL S Q+           RGS                                   +ARR   R+Q+     GRGRGLPPAL+NF YG++AAFTAT+ TYPLD+TRTALAFQGVPKRY+SMS F+ RT RE GVRGLFRG TPTLAMITPQMGVSFA WEALK  A PPAF  + S  S    +SWQL AG +AGM GKLV+FPLDTVKKRVQTA
Sbjct:    6 QDGEPCAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSVSGGGVRHRGSICPSSSPPHERRGAGRVGKVGGGWRTGGREGESPCQARR---RQQD-----GRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTA 319
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.080e-57
Identity = 140/343 (40.82%), Postives = 177/343 (51.60%), Query Frame = 3 
Query:  387 AGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVH-ALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYEWVR 1412
            AG  AGAVSR+ TAPLDV KIR QLD         S+    RS+Y EEGLI LWRGN  AM LW AYT VQF  Y  +R  D L++   SR S                                  A AR                   P     F+ G+ AA  AT  TYPLD+ RTA A QGVP+R+ ++ AF + TL   GVRG + G++  L  + PQMG++F A+EA+K +PP  + AA    A  W   AG  AG+  K V++PLDT+KKRVQ   +L    A       AG +  A  TV +E  A+AL+RG VPA+WK+  S A T+  YEWV+
Sbjct:   21 AGGVAGAVSRISTAPLDVAKIRCQLDGGKASPRYGSLLKTFRSVYAEEGLIGLWRGNPAAMALWIAYTAVQFGLYPLVR--DALSA---SRAS----------------------------------AYAR-------------------PRQTDKFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQALAAAPGL-ATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARVVL--SCAGDQAVAQAGNLRSAAATVWQEGAAVALYRGLVPALWKASLSAAVTFGTYEWVK 302
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.910e-55
Identity = 131/350 (37.43%), Postives = 182/350 (52.00%), Query Frame = 3 
Query:  378 DVSAGATAGAVSRVLTAPLDVTKIRFQLDHAV-TRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLE-RDVAY--GVLPKYAGPVHALKTVLKEEGA-LALFRGSVPAMWKSGFSTAATYAVYEWVR 1412
            D  AG  +GAVSR+ TAPLDV KIR QLD    + RY+  +    RS+Y EEGL++LWRG+  AM+LW +Y+GVQF  Y   R +                                            EEA                            F+ G+ A   AT ATYP D+ RTA A QGVP++++++ AF++ TLR  G RGL+ G+TP +  + PQ+G++F  +EA++ N PA + A  A  A  W  +AG  AG+  K+ ++P+DT+KKR+Q   +L  R VA   G     +G V A    +  EGA +AL+RG VPA+WKS  STA T+  YEWV+
Sbjct:   31 DTFAGCVSGAVSRLATAPLDVAKIRCQLDGGRGSARYD-GLLMTFRSVYAEEGLVSLWRGSPAAMMLWVSYSGVQFGVYPVFRRL----------------------------------LMRWRRWAHQEEASL-------------------FLQQRDRFLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALRALPAVGAW-WPAAAGFTAGLVSKIAVYPVDTLKKRMQAQAVLAGRGVAESGGAGGAXSGGVRAAALSVWREGARVALYRGMVPALWKSSVSTAVTFGTYEWVK 325
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A1W0A5C7_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5C7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.500e-46
Identity = 117/347 (33.72%), Postives = 167/347 (48.13%), Query Frame = 3 
Query:  381 VSAGATAGAVSRVLTAPLDVTKIRFQLDHAV--TRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVY---GSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGV-LPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYE 1403
            V +GA AGA +R++ APLD+ KIR Q+  A   T  +   +  A+  IYGEEGL T WRGN+ A  LW +Y+G+QF  Y+ L+     + ++                                                                 LS   Y   G+IA   AT+ATYPLDL RT LA QGVPK + +M AF S      G++G F+G++PT+  I P MG+SF  +  L           S+   +   +  GA+AG   KL+++PLDTVKKR+Q  G + R  AYG  +P+Y         +L+ EG    ++G+VP++ KSG S + T+ VYE
Sbjct:    8 VVSGAVAGAATRLIAAPLDLVKIRLQVHQAPMQTPEFGERLLKAIVRIYGEEGLRTFWRGNVAATGLWVSYSGIQFGCYQALQNTITNHDHK-----------------------------------------------------------------LSWIWYSGSGAIAGVVATMATYPLDLCRTVLASQGVPKAFPTMHAFASHIYTTQGLKGFFQGLSPTIFQIAPYMGISFGIYSTLSDI--------SSKHPILQAIGNGAVAGFMSKLIVYPLDTVKKRMQMQG-IPRHEAYGAAIPRYTSSWRCAHDILRHEGVAGFYKGTVPSLIKSGVSHSCTFTVYE 280
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A067CVE4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVE4_SAPPC)

HSP 1 Score: 174 bits (440), Expect = 5.040e-46
Identity = 121/354 (34.18%), Postives = 168/354 (47.46%), Query Frame = 3 
Query:  363 LEIVRDVSAGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCS--VWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTV----DFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGV-LPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYE 1403
            L++     AGA AG  +RVL APLD+ KIRFQ+  A +  ++    +  A+  IYGEEG+ T WRGN+ A  LW +Y  +QF  Y+ L+      D   S+    GS                                                                  G+IA   AT+ATYPLDL RT LA QGVPK + +M +F S      G RG F+G++PT+  I P MG+SF  +  L           S T  V   +  GAIAG   KL+++PLDTVKKR+Q  G + R  AYG  +P+YA        +++ EG   L++G+VP++ KSG + + T+ VYE
Sbjct:   49 LDVWEGAVAGAVAGGATRVLAAPLDLLKIRFQVHAAPSTPHDLGTRLLRAVAHIYGEEGVRTFWRGNVAATGLWVSYAAIQFACYQALQNSVVRHDHTLSWVWYSGS------------------------------------------------------------------GAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYANQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTL--------ADLSTTHPVLHAIGNGAIAGFVSKLIVYPLDTVKKRMQMQG-IPRPAAYGASIPRYASSWRCGLDIVRREGIAGLYKGTVPSLIKSGVTHSCTFTVYE 327
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A5D6Y0B7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.260e-45
Identity = 121/350 (34.57%), Postives = 173/350 (49.43%), Query Frame = 3 
Query:  387 AGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCSVWAA--------MRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSA---VSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYE 1403
            AGA AG V+R++ APLD+ KIRFQ+  A   R      AA        +RSI+ EEGL + WRGNL A  LW +Y+ +QF  Y  L  + +   +    G                                                            A  + + G++A   AT ATYPLDL RT LA QGVPK++ +M +  + T    GVRG + G+  TL  I P MG+SF  + +L A   A V  A A+ A   +S+ + AGA+AG+  KL ++PLDTVKKR+Q    + R   YGV+P YA  +  L+ +L+ EG   L++G+ P++ KS  + ++T+A YE
Sbjct:   23 AGAVAGGVTRMIAAPLDLIKIRFQVQQAPISRATGHQHAAKYVTLLQSLRSIHSEEGLRSFWRGNLAATGLWVSYSAIQFGCYRSLGGL-WSEHFVERHG------------------------------------------------------------AAVSTLNGALAGVVATAATYPLDLFRTVLASQGVPKQFPTMRSLAAHTWAARGVRGFYSGLGATLFQIAPYMGLSFGLYASLNAAAAARVDLAHASGAALALSY-VGAGAVAGLLSKLAVYPLDTVKKRMQMR-QVPRCATYGVIPHYASSLACLRGILRREGLRGLYKGTAPSLLKSVVAHSSTFATYE 309
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A024UR41_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UR41_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.690e-45
Identity = 114/352 (32.39%), Postives = 179/352 (50.85%), Query Frame = 3 
Query:  381 VSAGATAGAVSRVLTAPLDVTKIRFQLDHAVTR----RYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRG-LFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSA---GAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYG-VLPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYEWV 1409
            V AG+ AG ++RV+ APLD+ KIRFQ+   V      R+  S+  A+ +IY EEGL T WRGN+ A +LW +Y+GVQF  Y+ LR V          G+                                              W            AL++ + G+ +   AT++TYP D  RT ++ QGVPK Y +M  F + +++  G++G LF+G+ PT++ I P MG+SF  +  L       V ++S  S   W L     GAIAG   KL+++PLDT+KKR+Q  G+  R + YG ++P Y+  +   + + + EG   L++G++P++ KS  + + T+ +YE+ 
Sbjct:   10 VVAGSVAGGLTRVIAAPLDLLKIRFQVQVGVKSTKFPRHYMSLVHALSTIYREEGLRTFWRGNVAATLLWVSYSGVQFGTYQALRNVLVDVDGDGHDGNH---------------------------------------------W------------ALNSLI-GATSGVVATVSTYPFDRCRTVISSQGVPKVYHNMRHFFAASIQREGIKGGLFKGLGPTVSQIIPYMGLSFGIYTTLNE-----VTSSSTQSRFRWMLQTVGNGAIAGFVSKLLVYPLDTIKKRMQMQGV-PRHIDYGYIIPSYSSSLQCGRDIFRHEGLQGLYKGTIPSLIKSMLTHSCTFTIYEFT 297
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: A0A8K1CPW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW8_PYTOL)

HSP 1 Score: 171 bits (432), Expect = 3.750e-45
Identity = 119/349 (34.10%), Postives = 170/349 (48.71%), Query Frame = 3 
Query:  387 AGATAGAVSRVLTAPLDVTKIRFQLDHAVTRRYNCSVWA----AMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTV---DFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLS---AGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYE 1403
            AGA AG  SR++ APLD+ KIRFQ+  A    +  + +     ++RSI+ EEGL   WRGNL A  LW +Y+ VQF AY  L+T+   D  N +                                                                  L + V G+ A   AT+ TYPLDL RT  A QGVPK++ ++ +  S TL   GV G + G+ PTL  I P MG+SF  + AL           +A+S V W LS    GA AG+  KL+++PLDTVKKR+Q    L+R+ +YGV+  Y+        +++ EG   L++G+VP++ KS  + ++T+A YE
Sbjct:   17 AGAVAGGASRLVAAPLDLIKIRFQVQQAPISSHPGAKYVGFLQSIRSIHAEEGLRGFWRGNLAATGLWISYSAVQFGAYGGLKTLWPPDIANQHST----------------------------------------------------------------LVSSVNGATAGVLATVVTYPLDLFRTIFASQGVPKQFPTLQSLASHTLETRGVVGFYNGLGPTLCQIAPYMGLSFGIYAALNDL--------TASSGVHWVLSYVGTGATAGLVSKLMVYPLDTVKKRMQIR-QLQRNPSYGVMTPYSSSWACFLDIVRREGMRGLYKGTVPSLLKSVVTHSSTFASYE 292
[Close]
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Match: M4B5N0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5N0_HYAAE)

HSP 1 Score: 169 bits (427), Expect = 3.720e-44
Identity = 121/354 (34.18%), Postives = 171/354 (48.31%), Query Frame = 3 
Query:  390 GATAGAVSRVLTAPLDVTKIRFQL-------DHAVTRRYNCSVWAAMRSIYGEEGLITLWRGNLPAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFVYGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRGLFRGVTPTLAMITPQMGVSFAAWEAL---------KANPPAFVVAASATSAVSWQLSAGAIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVHALKTVLKEEGALALFRGSVPAMWKSGFSTAATYAVYE 1403
            GA +G V+R++ AP D+ KIRFQ+       +  V  +Y   + AA RSIY EEGL T WRGNL A  LW  Y+ +QF  Y  L                                                     RC  ++Q+     G     PP   + + G++A  TA +ATYPLDL RTA A QG+PKR+ +M +         GVRG + G+  T   I P MG+SF+ +  L         K    A       + A+S+ + +GA+AG+  KLV++P+DTVKKR+Q   +  R  AYGV+P Y+        VL+ EG   L++G+VP++ KS  S +AT+A YE
Sbjct:   25 GAVSGGVTRLVAAPFDLLKIRFQVQPTPRINNKQVKLQYEGLLQAA-RSIYAEEGLRTFWRGNLAASGLWVGYSALQFATYRILT----------------------------------------------------RCWEQDQD-----GTAAATPPFRVSALNGAVAGVTAAVATYPLDLFRTAFASQGMPKRFPTMRSLALHIWTSQGVRGFYSGLGATTFQIAPYMGLSFSIYSTLNDVASKHRSKQESSAINTWTPLSRALSY-VGSGAVAGLLSKLVVYPMDTVKKRMQMRHV-PRSEAYGVIPMYSSSWRCFVDVLQREGVRGLYKGTVPSLLKSVVSASATFATYE 318
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig633.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH83_9PHAE3.980e-15765.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK96_ECTSI3.330e-11562.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8L1_9STRA1.080e-5740.82Mitochondrial substrate/solute carrier n=1 Tax=Tri... [more]
A0A836C9B4_9STRA4.910e-5537.43Mitochondrial carrier domain-containing protein n=... [more]
A0A1W0A5C7_9STRA1.500e-4633.72Mitochondrial Carrier (MC) Family n=1 Tax=Thrausto... [more]
A0A067CVE4_SAPPC5.040e-4634.18Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A5D6Y0B7_9STRA1.260e-4534.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024UR41_9STRA1.690e-4532.39Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A8K1CPW8_PYTOL3.750e-4534.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4B5N0_HYAAE3.720e-4434.18Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig633contigP-littoralis_Contig633:56251..64967 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK96
PFAMsMito_carr
Model size1609
Max annot lvl2759|Eukaryota
KEGG koko:K15108
KEGG TC2.A.29.16,2.A.29.28
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.24e-118
EggNOG OGsKOG0752@1|root,KOG0752@2759|Eukaryota
Descriptionmitochondrial transport
Cds size1188
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig633.5.2prot_P-littoralis_Contig633.5.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig633 56412..64707 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791320.8566334-UTR-P-littoralis_Contig633:56250..564111680791320.8566334-UTR-P-littoralis_Contig633:56250..56411Pylaiella littoralis U1_48UTRP-littoralis_Contig633 56251..56411 -
1680791320.9441733-UTR-P-littoralis_Contig633:64707..649671680791320.9441733-UTR-P-littoralis_Contig633:64707..64967Pylaiella littoralis U1_48UTRP-littoralis_Contig633 64708..64967 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791320.8685126-CDS-P-littoralis_Contig633:56411..566271680791320.8685126-CDS-P-littoralis_Contig633:56411..56627Pylaiella littoralis U1_48CDSP-littoralis_Contig633 56412..56627 -
1680791320.8792398-CDS-P-littoralis_Contig633:57149..574431680791320.8792398-CDS-P-littoralis_Contig633:57149..57443Pylaiella littoralis U1_48CDSP-littoralis_Contig633 57150..57443 -
1680791320.8925362-CDS-P-littoralis_Contig633:57908..582961680791320.8925362-CDS-P-littoralis_Contig633:57908..58296Pylaiella littoralis U1_48CDSP-littoralis_Contig633 57909..58296 -
1680791320.9019864-CDS-P-littoralis_Contig633:58620..587191680791320.9019864-CDS-P-littoralis_Contig633:58620..58719Pylaiella littoralis U1_48CDSP-littoralis_Contig633 58621..58719 -
1680791320.912946-CDS-P-littoralis_Contig633:60853..608991680791320.912946-CDS-P-littoralis_Contig633:60853..60899Pylaiella littoralis U1_48CDSP-littoralis_Contig633 60854..60899 -
1680791320.9246042-CDS-P-littoralis_Contig633:64562..647071680791320.9246042-CDS-P-littoralis_Contig633:64562..64707Pylaiella littoralis U1_48CDSP-littoralis_Contig633 64563..64707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig633.5.2

>prot_P-littoralis_Contig633.5.2 ID=prot_P-littoralis_Contig633.5.2|Name=mRNA_P-littoralis_Contig633.5.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
MSSSIHDLAGAGAADQTRDGEHRAVLSTAFRLKALEIVRDVSAGATAGAV
SRVLTAPLDVTKIRFQLDHAVTRRYNCSVWAAMRSIYGEEGLITLWRGNL
PAMILWSAYTGVQFCAYEQLRTVDFLNSYQNSRGSSSGSGSSGRYTHRFS
TSAERSGGRGGGGVGGSEEAEARRCEGREQEWHRRRGRGRGLPPALSNFV
YGSIAAFTATLATYPLDLTRTALAFQGVPKRYDSMSAFMSRTLREGGVRG
LFRGVTPTLAMITPQMGVSFAAWEALKANPPAFVVAASATSAVSWQLSAG
AIAGMAGKLVMFPLDTVKKRVQTAGMLERDVAYGVLPKYAGPVHALKTVL
KEEGALALFRGSVPAMWKSGFSTAATYAVYEWVRAGTSAALDREQ*
back to top

mRNA from alignment at P-littoralis_Contig633:56251..64967-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig633.5.2 ID=mRNA_P-littoralis_Contig633.5.2|Name=mRNA_P-littoralis_Contig633.5.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8717bp|location=Sequence derived from alignment at P-littoralis_Contig633:56251..64967- (Pylaiella littoralis U1_48)
AGACGTTCAACAACAGCCGTGGAGCGTATATGACACCTCTTCTGTCGCCG
GCCGGTCTGCCACCGCAGCTATCCTGTCTAGTGGATAGCAGTGACGGGAA
CTGCCAACGGTTGTAGACGACGCTGCGAATACAGTGATCGCAGTCGCTCA
GCACCGAACAGGCCCAGTGAGCTTTGGCTTCGGTGTGCAAAGGTACGGCA
GCTCTGCAGAGCAGCTGGGGCACTAGCACAAGGCTGTGTAAAAGCCGATC
AAGGACGAAGATGAGCAGCAGTATCCACGACTTGGCGGGTGCTGGTGCTG
CTGACCAAACGCGGGACGGAGAACACCGCGCGGTCCTTTCGACCGCGTTC
AGATTGAAGGCACTCGAGATCGTACGAGATGTCTCCGCTGGGGCGACAGC
CGGAGGTGAGGGACGACCCCCCCCATACCGGTACACACAACACTCGTGTT
TCGTTGTTTCCCTGTTTCCAGTTTGTTTCCAGAAAAACGTGAAACGTTAC
TCCGCATGATAAGTACTACTCCGGAGTACTTAGCACTCCGAGTACTTCTT
TTTTAAGCACCAGGTACTTATTTAGAGACCACGACCTCACAACCTCGTCA
CGCTCTCGCCGCCTGTCGGCGAACAACCGCGCACCCGAACATCACAGCGC
GTGTGAGTTGATTTAATCTTGATGCAACGTGCAAAAGATACGCATTGAAG
TGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCCGTTGTCATTCGCATTT
GTACCCTGTACCCTGATGTGTGGTGTAATCGTGGATTTGGTTATCTACAT
ATCATATGATATACTCCGTATAGAAGTACATAAAAGTTTAGAGTGATCTG
TGCGAGTTCACAGCAGCTACTGCTGTATTGTCATCACGTCACTTTCAAGG
TTCTGCTTAGTACAATGCGCGGATAGCAGCAGTTCATTACCTAGTGTACA
ACCGCGCTGGTGTGCTATGTGTATTTGGGGGCTTTGGCCGTCTATCGCAG
CAGAGTGACATGCGCAAGACACTGCCGCGTGCACAAAACGCCATCACGTC
ACTTGCTGGTACCGCTGCAGCATCATACTCGGACAGCGGCAGACGTTCAC
CTACCGGTAGTTCCACCGCTGTCACTCAGGAGATAGATGCAGAGTTCAGA
GTAGCTCCATGAAACCGCCGCGAAAGCAACAAGGAACAGAGAGGAGAAGG
AAGAGTTGCAGTAGCACCGGCCGGCATTGACGTTGACCTTCCCAGCATTG
TATGAACAAACATGATATTAATCGTATCATATCATACGAAGCACCACACA
CCCGACACGAAAAAACACCACGGCGGTGCAGCAGTGTACATCTCGATCGC
AATATACGTAAAGTATATACCACTCCCTCTGTTTGGAAATATAAGTCCGA
TTTGGATTTTCGAATATAAGTCCGGTTAGGGTTAGAGGTGTTTCAGAGGT
CATTCCCTTCCAATTTGTTTTTGCATCGTGCTCGGATATAATATGAACCC
AATGGAGAAACAAAAACAGGGGATGATAATGTTTCGTCCCCCCCCCGGAG
AAAAAATAAAAAATTATTCCCTGCGACAGCCCTCATCTCAGTAGGAAAAC
TGGAAAAAAGAGGTGTCGTTTTTTATCTCTAGCGCGGCAAAAAAAAGGCC
ATTTTGCTCGTTTTTTTTGTTGTTGTATTTTTGGGCAGTTAAGCTACCTG
TACAGCCACCTTTTGCAGTATTTTCACAAGTTCTTGGCTGTTGACCGGCC
CAACAACTCTAGGGTGGCAAACATTGGCCACTTCGAGGGGCAAAAACGAA
GGGAAGACGTCAGCAAAAATAAAAATAAAAATGTTTTTTCAAAAAACAAA
AGGTGTTCACACCGAGAATCGAACTCCCGGCCACTGAATGACACGACTTG
CGCGAGTCAGCCCGCTTTTTGTCCAAATCGGACTTATATTCCCGAAGAGA
GGGACTGATGTAACATGATGAAAGCAAAACATTCTACTGCTGTGTCATAC
CAGTGTCAGTCACAACAAGGGCGAAGGCTGCCCATTTTGCCGAGGGCAAT
TTCCCGCGACGCTATAAAAACAAGACGCACATCTAGTCAAGGTAGGAACA
TAACAGCAGTCAAGTGGGTATACAGCCGTGACTTGTATCAAAGTTGGCTT
TCAAGACGCTACAGTATTGGTCGGGGTAAGTGCAGGACTGTATTGCTGTG
TCCTCAAATACGTGGTATAATTGTCCACTTCAACCTTCCTCGCGCAGCCT
CCTGCATCTCACAATGAAAATAGACATACAAAAATAAATACGAAGTACTT
CTCGACAATGCACTTCGAAGCATATTAATTACACGTAAGACGGTTTCTTG
TAGGGCCGGATTTTTTTTTCATTTTTTGATAGAATCCGAAAGAACTTTTT
CCGGCCAACGGTTGCCGATCCGCTGTTCTTCTAGGTAAATAGGTGTTCGG
ATTTTCGGTGATCCTTTTTTTAAGTAGGTGGTTGAAAAGTCGGCTCCAGA
GTATAAATCTGCATCGAAGGACCGCATGGTGGTGTTTTTTGCGCTGAAAC
CCGTCTGCATCGCCGCTCGTAACTTTCGAACGAATGAAGACACAGCAATG
ACGAAGGCATCTTCCGTGAGCTGTGCATATGATCCCCCTCGTGTCGTGAT
CGCTTGTGTTAGGGTTACATCCGTACATTCGCAACGTAGGTTTGCTCATG
GCGAACTCATGCGAAACAAATTGAGAAAGATGTGTCAGCCGGTCTGCTGT
ACAGCAGCATTATTCTATACTGCTGTAAAGTGCTTGTACAGCAGTAGAGA
AAGGAGATGACAGCTCGGGTTCTTTTTTACAACACAACAACATGCCACAG
CCACGAGCGATGACCATTTTGCGAACATGCCAGTGTGACCCTCACCCAAA
CGATTACCACACGAGGGGAGCCATACGCACAGCTCACGGGAGATGGGTTT
GTCATCGCTGTGGCTTCATTCATTGGGGAGTTACGAGCGAAGAGGCAAAC
TGTGGTCTCACTCAGAGGAAGCTTTGATACTCCTCCTCCTGCTGCTGCTG
TGCTGATGATGCTGCTGCTACATACGGTTGATTTTGGTTGCTGATGAACA
CGATGGAATGGATGATGACACGTCAAGCGTACACAGAAATATGGTGGACA
CATGTATGGACAGCAGCAAGCAGTAGTAGCAGCAGCAGCAGCAGGAGCAG
AAGCTGCAACAACACAGAAAGTAGTAGCAGGGCTCTCCTCCTCTGATGCT
CTGTTGTGATTAATACCGTTTGTTTTGTCCACAAACAAAGAGAGAGATAA
CTTCACACATTTTTTTTGTAATATATTTTCCGATCGTATTTCCCGAACTG
ATTTAGGTTTCGGAAAATGTCCGATTTTCCGGCTGGAATCCGATTAAAAG
CTGTTCGGAAAATTTTGTTCGGAAAATGTTGTTGGGAAAAAGGTGTTTTC
CGAGCCTATCAGCAGCCTGATTTCAAAAAAAAGTCGGAATCTATCAAAAA
ATGAATAAAAAATCCGGCCCTACAAGAAGCCGCCTCATGTCTCTCTACTG
CCAATGTTCAATATTTTCACATTTTCCGATATCCAACTGCAATAGGTGCG
CAACCAACCGTAGACGCTGATGGACGACTTCATCGGGGCAAGGTCGACCT
AGGTGCCGTTTGGATATCCTTTTACCCGGGACATCAATAAAGTGTAGTAA
TAGGTCATCGGCTCGAAAATAAAGCCCCTGCGCGCTCTTTGACACGCGTT
GCAGCGGACAAGCGTTGGGTTCAAGGGCGTATCAACAAGCTTTGAAGGAA
CGTCAACATAGAACTGGGCAAAATCAAAAGGCTCGCCAATGGTCTTGCTC
GAAAACTATGGTTCGATCAATGGACTCACATTATTTGGGTGCGAATACTT
GTGCAGGATTGGTGGGAACATTGGGTGAACGATGGCGCCAATCGATGCCA
TTTGCTGAACTTCTTTGCGTTATCAAAACGCCTCTATGTGCTCTAATCCC
TCCCTCCCCTCTCCCCCCGTCGGGGCCGTCTTGTTTTGTTTATTCTTCCG
GCTGAACGTGTCGCGCAGCGGTTTCTCGCGTACTCACGGCTCCGCTCGAT
GTCACAAAAATAAGGTAAGACGAGACCCCGCACCTGGTATGTTTCCCACC
ACCCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGGTTCCTACT
TTTTTGCCACTCTTCGTGTTGATAGGTTCTCTTTCAGGCATAAAATTCGG
CGATTTGTATTCAGAATCAGTCGGAAGATTAAGAGAAAAAGAAGGGCAGA
CCAGTTTTGTACGAATCGCTTTCCGTTTCAGACTAAAATTCGGCTTTTTT
TTTCGCACAACAAAAACTCAAAGTTAGTTCGGGGGCTTAGGATAGGAGCC
CGCCCCACCATAAAATTGTTGTCCCGATTTATTCGGAAGAACTCCTTTGT
GCCTCTGTCTGTCTCTGTCTGTCTCTCTCCTCTCTCCCTCTCTCTTGCGG
CGTTGCTCGCCGTATCACACCTCCACATGACACTCACACACACACAGTGA
GTGGGCAGGTATTCGATCTACCAGGAAACACGGCATTTTCATAGGCTAGC
CTGCCTGACGGATCTAACGAGCTCCAGCGAAAGCGGCTCGCAGATAACAG
ATGTCTCGAGGAGTGTTGTCGCTGTGGTATTTATCGCACAACACACAGCC
ACACGAGTCGACGCTGATGTGTAATTTAGTGTAAATACATGGCAGCGTGG
TCTTGTGGTGCTTCTTCCTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCGG
ATGTTCACAAGCTCGACCAACAAGAGCGGCAGCCAGCAGAGAGATGTCTT
CGTCAACAACAACAACAGCAGCAGCAGCAACACCACGACCGCCGTATCAC
CCATTACCGCAGCTACACCACCACAGCAGTCTAACTTGCAGCAGATGGGC
GCACGGCAGTGAGCTCAGGCCCACACTGGCAGCGCCGGCGTCGGCAGCAT
CAGCCAGGCTGTAAGAATGTTGTCGCGGCAGCGCAACCTGAAACTGCCGC
AAACCGCCGACCCTCCCTCTGCGGCGGCATCCACTTCAGGAAACACTCCA
ACTCCAGATGATGGCCAGATAAACCCTTGCTCGTTCGTTTTTTTTTTTCA
ACAGCTTACTTTGAGCAGCCGCTTCGCTGGGTCGCTCGCTAGCCAGCACT
AGCGACCCATTGGGTACGAAGTTTATGTGCGACCGTATGTTGTGCGGTCA
AGTCCCTGAGACATCCTGCGTGATGGGTGCGTCATTTTTGGTGTGTGTGT
GTATGTATCTCCCCACGATTTTGAGCACGTTGTACGACGTTGAGAGACAC
CAGTTCGGCACCGGTCGTGGCACCCAAGCAGTGAACGGACGTTGAAAATA
CAACGGAGTAATCGGTGGGTTTCCTCGTGAACCACTACCAATTTGTGCAG
CGAGGTCGTCGCGTGATACATACACGGTGCGTTGTATTGATATGAGCTGT
ACTGCCCTTGGGGTGGTTGAGAGAGAGAGAGATTGAGAGAGAGAGAGAGA
GGGAGAGAGAGGGAGGGAGAGATAGAGATATAAATAAAGAGAGATAGAGA
AAGAAAGAGAGTTACAGCACACACACCCGTCCGACCACTGACCGCGGGCA
CTCCCGCTGCTAGAGGCCCACACGGTTCTACTCACAACACCACAGTCCTA
CTCACAACACCACACTTGTGTCCGTCAGAGATCTTGGAGATGCCTCGACA
AGGCACTCCGTAGCCATGGCACTGCTATTCTGCTGCTCCTGCTGCTGTAC
AGCGTACAGCAGTCGTGCTGATACATTTTTTTTCAACAGTGCCCTGTGGG
GCGAGGAGGAAGGGGGTCGTACAATATCCTTAACGCACACGGCTAAGTGC
GTTTTTTTCAGGAGGCGCCACACCCACGCACTTCCGGCCTCTCACTTCAG
ATCCACGCCCTCCATATGTAGCGCGTTTCGACCGTTCGTGTGTGTCTGGT
CACATCGCGCACGCGGTCCTGTGCCAGACTGCTGCATTTAAGAGATCCTG
CTGCTCTGCACCTTTCGCCCTTCTATTGGAAGGCACAGCTAGCAAAAAAC
AAAATTCAGTGCTCCTGTACGTACTGCTGTCTTTTGCTCACTCAGGCACT
GTTAACAAAATTCATCCGAGCACCGAATCAAGTTTTTTTAATTTTTGTTT
TTTGAAGCCATACATAATATACCTCTGATGTTCCTCTGCTCCGCTTAGGT
TCCAGCTAGACCACGCCGTGACGCGGCGGTACAACTGCAGCGTGTGGGCG
GCGATGCGGAGCATCTATGGGGAGGAGGGGCTGATAACGCTCTGGAGGTA
AGTGCTGCTGTTGCGGGGTACGTGCGTATTTCGATAGATCGTCCAGGATT
CATCACCCTCGCGGTTCAGTGTCACACAGCAGTCCTAGCTAGGGTTGTGG
ACACGAAACCCACCGACAACCACGTCGGGTCGGTGGCCCGTGTTTCTTTC
CAACACCACCCATATGCGTCTCCAATCCAATCCAATATAATCCGATCATG
CACCACACTCGACAAACTCGACAACCTCGTCAAGCCCGACCCCCCCCCTC
CCCTTCCCCACGCTCGCGGATATCTCTAATTTCGTTCTTCTCGCAACAAC
AAAATATTTCCCCTCAAACAGGGGAAACCTCCCCGCGATGATCCTCTGGT
CCGCCTATACGGGGGTGCAATTTTGCGCCTACGAGCAGCTCCGAACCGTG
GACTTCCTCAACTCTTACCAAAACAGCCGCGGCAGCAGCAGCGGCAGCGG
CAGCAGCGGCAGGTATACTCACAGATTTTCCACGTCAGCGGAAAGGAGCG
GAGGAAGAGGAGGGGGAGGAGTAGGAGGCAGTGAGGAGGCTGAGGCGCGC
AGGTGTGAGGGGCGGGAGCAAGAGTGGCATCGAAGGCGAGGGAGAGGGCG
TGGTTTGCCGCCGGCGCTGTCGAACTTTGTCTACGGCTCGATCGCCGCCT
TCACCGCCACGCTCGCCACGTACCCGCTCGACCTCACCCGCACAGCACTG
GCATTCCAGGTGAGGAAGGGGGTTGGGGGAGGGGGGCTTGAGGATGGAGT
TTGTTTTTGGCCAGGTTCGGTCGAGGATGGCGTGTGATCACAGAGGATTT
TGGCAGGCAAGTATTTCAGACGTGGAGGGTATAGATTCGGCTTCGTCTAG
TGTCACGCACATGCATGGGGCAGGCGCGGCCCGGTCCAATGGGGGGAGAG
AACGATCCAAGCGATGGCTCGCTTCGAGGTTCGAACACTCGAACGAAAAT
GGGTATGTATCCTGCATGTGCTTTCGTACTTTTCAAAGATTCATGGAGTG
TTGCGATGTGCACGCATGTGCACTAATACGCCCTACACAACGATGCAGAG
AGCAACCTAAACTGGGGATGTATTTATGCGCACGAGAAACCCGCCGTTTG
TGCACTCGTGAATAACCCCGCCCCCCACCACGGCCACGGCCACCGCTTTC
GCCATCGCCAACCCCCAACTACAGGGGGTCCCGAAGCGATACGACAGCAT
GTCGGCGTTCATGAGCCGCACCCTCCGAGAGGGCGGAGTTCGAGGTCTGT
TTCGCGGCGTTACGCCCACCCTGGCGATGATTACGCCGCAGATGGGGGTG
AGCTTCGCGGCGTGGGAGGCCCTCAAGGCGAACCCCCCGGCGTTCGTGGT
AGCGGCGTCGGCGACGTCGGCGGTGTCGTGGCAGCTGAGTGCGGGCGCGA
TCGCGGGCATGGCGGGAAAGCTCGTCATGTTTCCCCTGGACACTGTGAAG
AAGAGGGTCCAGACGGCGGTGAGGAAAAACGGAAGAGGGGATTCTGCGGA
GGGGGTAGAGCTTGGCAGGATGGGGAGGGGGAAGCGAGCGGGGCTAGGGC
TTCAGCTAAGAGGAATATGGGGGAGGGAGAAGGGCAGGGGAAGGGCGGGG
CGATCGCTTTCGGCACAAGCAGTGATCGAAAGCGCCTCTTTGCCGTACAC
GGGAGGCTAGCGCGGTGTGGTGGTGGTGTTGGAGGCACAAGCAGCGCGAA
GAACGCTTGAAGTTTTCTACAATGTTCACAAACGAAAGACCTACGGTACC
GTAATTTACACCTGTGGATCATGCGAGCGATGGATACGGCAACTCTGGTC
TCGTCTTCTGGTTGATGAACGGACGAGACACAAGGCACGATCCATGTGGC
GGCTGTCTACCAACATAGAACAAATATGTGCAAAAACCCTCAGCTGTTCG
CCTCCGCCCCTGTCCCCGCCCCCGCCCCCCCCTATGCCCCGCCGCACACC
ACCCCTCCGTATGCCCATGAAATATCCAACTCAACACCAGGGGATGCTTG
AGCGTGACGTCGCGTACGGCGTCCTTCCCAAGTACGCCGGCCCCGTCCAC
GCGCTCAAGACGGTGCTGAAGGAGGAGGGCGCTCTGGCGCTGTTCCGAGG
CAGCGTTCCCGCCATGTGGAAGTCGGGCTTTTCAACCGCGGCGACCTACG
CGGTGTACGAGTGGGTCAGGGCGGGCACGTCGGCTGCGTTGGATCGAGAG
CAGTAGGGCGAATGCGGATGAGACTGGTACACCCATCAAGAGTTGCAGCC
AACACGCTGTCTTTTTCTTGGAGGGCGGACTTGACCGTTTGGCACAGGGG
TAACGTGTGTTTCTGCTGCTGCGTGGAGAGAGTTTTTTTTTGTATGGGGG
CGTGTACACTTTTTCGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig633:56251..64967-

>mRNA_P-littoralis_Contig633.5.2 ID=mRNA_P-littoralis_Contig633.5.2|Name=mRNA_P-littoralis_Contig633.5.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig633:56251..64967- (Pylaiella littoralis U1_48)
ATGAGCAGCAGTATCCACGACTTGGCGGGTGCTGGTGCTGCTGACCAAAC
GCGGGACGGAGAACACCGCGCGGTCCTTTCGACCGCGTTCAGATTGAAGG
CACTCGAGATCGTACGAGATGTCTCCGCTGGGGCGACAGCCGGAGCGGTT
TCTCGCGTACTCACGGCTCCGCTCGATGTCACAAAAATAAGGTTCCAGCT
AGACCACGCCGTGACGCGGCGGTACAACTGCAGCGTGTGGGCGGCGATGC
GGAGCATCTATGGGGAGGAGGGGCTGATAACGCTCTGGAGGGGAAACCTC
CCCGCGATGATCCTCTGGTCCGCCTATACGGGGGTGCAATTTTGCGCCTA
CGAGCAGCTCCGAACCGTGGACTTCCTCAACTCTTACCAAAACAGCCGCG
GCAGCAGCAGCGGCAGCGGCAGCAGCGGCAGGTATACTCACAGATTTTCC
ACGTCAGCGGAAAGGAGCGGAGGAAGAGGAGGGGGAGGAGTAGGAGGCAG
TGAGGAGGCTGAGGCGCGCAGGTGTGAGGGGCGGGAGCAAGAGTGGCATC
GAAGGCGAGGGAGAGGGCGTGGTTTGCCGCCGGCGCTGTCGAACTTTGTC
TACGGCTCGATCGCCGCCTTCACCGCCACGCTCGCCACGTACCCGCTCGA
CCTCACCCGCACAGCACTGGCATTCCAGGGGGTCCCGAAGCGATACGACA
GCATGTCGGCGTTCATGAGCCGCACCCTCCGAGAGGGCGGAGTTCGAGGT
CTGTTTCGCGGCGTTACGCCCACCCTGGCGATGATTACGCCGCAGATGGG
GGTGAGCTTCGCGGCGTGGGAGGCCCTCAAGGCGAACCCCCCGGCGTTCG
TGGTAGCGGCGTCGGCGACGTCGGCGGTGTCGTGGCAGCTGAGTGCGGGC
GCGATCGCGGGCATGGCGGGAAAGCTCGTCATGTTTCCCCTGGACACTGT
GAAGAAGAGGGTCCAGACGGCGGGGATGCTTGAGCGTGACGTCGCGTACG
GCGTCCTTCCCAAGTACGCCGGCCCCGTCCACGCGCTCAAGACGGTGCTG
AAGGAGGAGGGCGCTCTGGCGCTGTTCCGAGGCAGCGTTCCCGCCATGTG
GAAGTCGGGCTTTTCAACCGCGGCGACCTACGCGGTGTACGAGTGGGTCA
GGGCGGGCACGTCGGCTGCGTTGGATCGAGAGCAGTAG
back to top