prot_P-littoralis_Contig632.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig632.34.1
Unique Nameprot_P-littoralis_Contig632.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length745
Homology
BLAST of mRNA_P-littoralis_Contig632.34.1 vs. uniprot
Match: D7FKN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN6_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 6.150e-195
Identity = 395/767 (51.50%), Postives = 473/767 (61.67%), Query Frame = 0
Query:    1 RRRPFLRKQWLQRLRQSTTNEVAAAAQGYEPPASHVTSSPPSTFPTSTSA-APAIAAISKSAKTP-TALIRVGRDHVKSVVHLALSEARVNAFVVISALEGLLSVATEGRRLLGKGITTDPGGTNDNTSNNNAETGGNCTHRNEHGADAHPSERGAQALHQREYKNTPSESGPSALADECGKTGLSQRGCGTDGAAIAVGGSSSNRGESGAALCVRLGALPAVLGFLDEHAGHKQIEPLAIGLLCMFASDHTTARAVRGNADVVATCTARMFPSAAIPVVRDEGSSGTASGARYPSSETRASG---------EYRRSDAGPERRAGHANDAQSVDCEDPRLNFAAATSPSKLAPPTVSEAAPKEHKPKAAMVATTTAATTTHTGAQSISTITCAHTLSDRATAARGSGTIHTPQGQDKTCGMSAAIGRGPLRP----QLPAADLVFVLSVSVQDSPECQRLALRSGGITAMLATLRQLVEE--------WEAGSPGCGXXXXXXXXGDHGRLSEMCLRVMEHLGRPERGRRRLVADGSVETTIATIGHLMSDVGVLTAATGLLLLLSDSSEGRARILKAGGVSVVFEAMQRLVGNGSLQVKGVEMLQTLIREEPQQARRELDSIKGGWQWLCQGTSDGDALIRYAPGEKHISGWTLSEEERLTTQEALATAEEAASDWTPYSLATFMGTMRSQHKLQIGNLAYYHFFRVVSEAGLLPHHHEDVEDWRDRMRRYEDERHIRVGNITRRRLARDKAGAHARSFGSSSAV 744
            R RPF+R++WL+RLR  T   + +  +     AS    SP +T  T  SA APA ++  + A TP +AL RVGR+HV+SVV LALSEARVNAFVVIS+LEGLLSVA E  R+  +G    P    + +       GGN   R         S+  A  L  R  K  P   G +    E G    + RG  T     +  GSS+ RGESGAALCVRL A+PAVLG L+EHAGHK+IEPLA+ LL +FAS+ T A A+RGN  V A C ARM PS          ++  AS A + S+   + G         + R+  AG  +  G+A        E    N  +A  P  L  P     A   H    A+ A  + A         +  ++    L +R   A       +P+ + +   MS+A       P     +P  DLVFVLSV+VQDSP CQRL L++GG+ AM ATL+ LV          W+ G+  C           + RL+E CLRVME+LG  ERGRRRLV  GSVE  I+TI       GVLTAATGLLLLLS S EGR RILKA G  VVFEAMQRLVGN  +QVKG EMLQTLI EEPQ ARRE+DSIKGGWQWLCQGTS GDALIRYAPG+KHI GWT+SEEERL T++AL TAE AAS+WTPY+LATFMGTMRSQH+LQIGNLAYYHFFRVVSEAGLLPH +EDV DWR R+RRYEDERHIRVGNIT+RRLARDK GAHARS  SSS++
Sbjct:    2 RERPFVRQKWLKRLRHQTAINIESDHRD----ASSAALSPSNTTSTPASARAPAFSSGQEDAHTPPSALTRVGREHVRSVVQLALSEARVNAFVVISSLEGLLSVAAE--RIGREGPVGTPSSLREVSQAGGRSEGGNKKKR-----IGESSQDPAANLGGRATKLYPGP-GRNDSGSEDGSLRRAHRGHPTT--PSSTNGSSTGRGESGAALCVRLEAVPAVLGCLEEHAGHKKIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPS---------DNTANASTASFLSTGQASDGGGVGDDPGYDGRKGSAGGRKTLGNATSTTEASAEKVDSNGTSAMKPLDLGGPETGSTAGDGHGSSLAVPAPPSMANL-------LPCLSSNTRLEEREEDA-------SPERKSRDRAMSSAASARKSPPGSHMNVPTTDLVFVLSVAVQDSPVCQRLVLKAGGVAAMSATLQHLVSRVKQEAGSRWDGGAEDCSDR--------YARLAETCLRVMEYLGCVERGRRRLVRGGSVEIAISTIRCFRCHSGVLTAATGLLLLLSVSPEGRGRILKARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQ-ARREMDSIKGGWQWLCQGTSGGDALIRYAPGKKHIPGWTVSEEERLNTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQIGNLAYYHFFRVVSEAGLLPHPNEDVHDWRQRLRRYEDERHIRVGNITQRRLARDKTGAHARSLYSSSSL 722          
BLAST of mRNA_P-littoralis_Contig632.34.1 vs. uniprot
Match: A0A6H5JF41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF41_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 9.550e-158
Identity = 363/791 (45.89%), Postives = 446/791 (56.38%), Query Frame = 0
Query:    1 RRRPFLRKQWLQRLRQSTTNEVAAAAQGYEPPASHVTSSPPSTFPTSTSA-APAIAAISKSAKTP-TALIRVGRDHVKSVVHLALSEARVNAFVVISALEGLLSVATEGRRLLGKGITTDPGGTNDNTSNNNAETGGNCTHRNEHGADAHPSERGAQALHQREYKNTPSESGPSALADECGKTGLSQRGCGTDGAAIAVGGSSSNRGESGAALCVRLGALPAVLGFLDEHAGHKQIEPLAIGLLCMFASDHTTARAVRGNADVVATCTARMFPSAAIPV---VRDEGSSGTASGARYPSSETRASG---------EYRRSDAGPERRAGHANDAQSVDCEDPRLNFAAATSPSKLAPPTVSEAAPKEHKPKAAMVATTTAATTTHTGAQSISTITCAHTLSDRATAARGSGTIHTPQGQDKTCGMSAAIGRGPLRP--QLPAADLVFVLSVSVQDSPECQRLALRSGGITAMLATLRQLVEEWEAGSPGCGXXXXXXXXGDHGRLSEMCLRVMEHLGRPERGRRRLVADGSVETTIATIG-----HLMSD----VGVL--------------TAATGLLLLLSDSSEGRARIL--------KAGGVSVVFEAMQRLVGNGSLQVKGVEMLQTLIREEPQQARRELDSIKGGWQWLCQGTSDGDALIRYAPGEKHISGWTLSEEERLTTQEALATAEEAASDWTPYSLATFMGTMRSQHKLQIGNLAYYHFFRVVSEAGLLPHHHEDVEDWRDRMRRYEDERHIRVGNITRRRLARDKAGAHARSFGSSSAV 744
            R RPF+R++WL+RLR  T   + +  +     AS    SP +T  T  SA APA ++  +   TP +AL RVGR+HV+SVV LALSEARVNAFVVIS+LEGLLSVATE  RL  +G    P   +D +       GG+ T+R         S+  A  L  R  K   S +G +    E G    +QRG  T  ++    GSS   GESGAALCVRLGA+PAVLG L+EHAGHK IEPLA+ LL +FAS+ T A A+RGN  V A C ARM PSAA+P    + D G +   S A + S+   + G         + R+  AG  +  G+A        E    N  +A  P  L  P     A   H    A+ A +T A            + C  + + R             Q +D+    +A+  + P     +LP  DLVFVLSV++QD+PECQRL L++GG+ AM  TL+ L+   + G+              + RL+EMCLRVMEHLGR ERGRRRL   G VE  I+TI      H   D    VG L              +    +     D    R R+L        +A G  VVFEAMQRLVGN  +QVKG EMLQTLI EEPQ ARRE+DSIKGGWQWLCQGTS GDALIRYAPGEKHI GWT+SEEERLTT++AL TAE AAS+WTPY+LATFMGTMRSQH+LQ+GN+             LL           DR   YEDERHIRVGNIT+RRLARDK GAHARS  SSS +
Sbjct:    2 RERPFVRQKWLKRLRHETAINIESDHRD----ASSAAFSPSNTTSTPASARAPAFSSGQEDVHTPPSALTRVGREHVRSVVELALSEARVNAFVVISSLEGLLSVATE--RLGREGSVGTPNSLHDVSQAGRRSEGGDETNRT-----GESSQYSAAKLGGRSTKLY-SGAGRNDSGSEDGSLRRAQRGHPTTPSSTK--GSSPGIGESGAALCVRLGAVPAVLGCLEEHAGHKTIEPLAVRLLWVFASEVTAAAAIRGNPAVAAACAARMTPSAALPATCAIDDNGGTANTSTASFLSTGQASHGREVGDDPGYDRRKGSAGRRKTLGNATSTMEASAEKFDSNGTSAVKPPGLGGPETGSTAGDGHGSSLAVPAPSTMAKL----------LPCLSS-NTRLDGEEEEDASPERQRRDRVMSSAASTRKSPSGSPLKLPTTDLVFVLSVAMQDTPECQRLVLKAGGVAAMSTTLQHLISRVKQGAGSRWDRSEEDCSDSYARLAEMCLRVMEHLGRVERGRRRLERGGYVEIAISTIRCFRGCHRGRDRFRIVGKLWPCAEHTRQPRARSSGGGSIFFCTCDILSTRRRLLYLHRCCPSQARGFRVVFEAMQRLVGNDLVQVKGAEMLQTLINEEPQ-ARREMDSIKGGWQWLCQGTSGGDALIRYAPGEKHIPGWTVSEEERLTTEKALETAEVAASNWTPYNLATFMGTMRSQHQLQVGNM-------------LLA----------DRCHGYEDERHIRVGNITQRRLARDKTGAHARSLYSSSTL 743          
BLAST of mRNA_P-littoralis_Contig632.34.1 vs. uniprot
Match: A0A7R9UBD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBD5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.280e-8
Identity = 40/134 (29.85%), Postives = 69/134 (51.49%), Query Frame = 0
Query:  493 CLRVMEHLGRPE-RGRRRLVADGSVETTIATIGHLMSDVGVLTAATGLLLLLSDSSEGRARIL-KAGGVSVVFEAMQRLVGNGSLQVKGVEMLQTLIREEPQQARRELDSIKGGWQWLCQGTSDGDALIRYAPG 624
            C R++ +    + RG+  +V  G ++  +  +     D  +  A+   L+     S+G+  I  K G +  V  A+Q L     +Q++G+E+++ L++        ELD I G WQ LCQGT +G+AL+RY  G
Sbjct:  347 CFRMLSNAATLDPRGKTEMVCLGCIDLCLRVMVGCKLDPFITKASLEALICACGESQGQQEISGKIGVIPTVVRALQLLPSEAGVQLRGLELIEKLVKHPS--LWEELDFIPGAWQSLCQGTPEGEALLRYQKG 478          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig632.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKN6_ECTSI6.150e-19551.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF41_9PHAE9.550e-15845.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UBD5_9STRA4.280e-829.85Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 426..622
e-value: 1.5E-9
score: 38.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..137
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 432..621

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig632contigP-littoralis_Contig632:121720..129178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig632.34.1mRNA_P-littoralis_Contig632.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig632 121720..129178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig632.34.1 ID=prot_P-littoralis_Contig632.34.1|Name=mRNA_P-littoralis_Contig632.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=745bp
RRRPFLRKQWLQRLRQSTTNEVAAAAQGYEPPASHVTSSPPSTFPTSTSA
APAIAAISKSAKTPTALIRVGRDHVKSVVHLALSEARVNAFVVISALEGL
LSVATEGRRLLGKGITTDPGGTNDNTSNNNAETGGNCTHRNEHGADAHPS
ERGAQALHQREYKNTPSESGPSALADECGKTGLSQRGCGTDGAAIAVGGS
SSNRGESGAALCVRLGALPAVLGFLDEHAGHKQIEPLAIGLLCMFASDHT
TARAVRGNADVVATCTARMFPSAAIPVVRDEGSSGTASGARYPSSETRAS
GEYRRSDAGPERRAGHANDAQSVDCEDPRLNFAAATSPSKLAPPTVSEAA
PKEHKPKAAMVATTTAATTTHTGAQSISTITCAHTLSDRATAARGSGTIH
TPQGQDKTCGMSAAIGRGPLRPQLPAADLVFVLSVSVQDSPECQRLALRS
GGITAMLATLRQLVEEWEAGSPGCGCGGGGNGGGDHGRLSEMCLRVMEHL
GRPERGRRRLVADGSVETTIATIGHLMSDVGVLTAATGLLLLLSDSSEGR
ARILKAGGVSVVFEAMQRLVGNGSLQVKGVEMLQTLIREEPQQARRELDS
IKGGWQWLCQGTSDGDALIRYAPGEKHISGWTLSEEERLTTQEALATAEE
AASDWTPYSLATFMGTMRSQHKLQIGNLAYYHFFRVVSEAGLLPHHHEDV
EDWRDRMRRYEDERHIRVGNITRRRLARDKAGAHARSFGSSSAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold